© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0276500.1
CTCATGCTAACCTTTTAAGTGGTTTGTTGTAGCTCTCAGAAATGAAATAATAACTTGATAATTTCTCTTGAATAAAAGCGGCAATACTAACTTGGGCATAAAGAGGGTAATACTAACTTGTGCATAAAGAGCATAATATTGTTGGAGCCTTGGAGGACCAGATTATGTACCTGCGACTGGAATTCCTAGATGATGAAGTCGCTGGGTGCAGAAAACATACATCTAATTTCTCATGCAGCAGTTTGACTACGGCATTCAGAATTTCAGAATTTCAGATACAATACGTCAAAAACTACAGTAGCAGGTTATGAGGAGACATCAGTGGCATTTTTCTCCCAGCTTCTTTCCCGCGAACGATTATTGCTGTCGCTTCTCGTAATGTGCCGCAGGCATAGAACAGAAGGCAACGGCGTCTATGAACGCAAACTCGTGCAATGACAGTAAACAAGCAATTCTTTTCCCCTCTTGATCCTGCTGCCGCTCTAGGCCAGAGAGTTCACATGCAGATTTTCTCCGACGATCTGGCAGTGTTGAGGCACGACACCGTTCCTGTAGTCGCCAGAAAAATCTTCTACATTGGTCTGCAATGAATGCTATCACGCTGGGGAAGCTCCAGTCAGAAATGAGAACTCTGACCTCCAACTATCAGCAACACTTCCCAGATGCATGCTGCGGTTGCTGCCCTCATGGTGATTTAGTTCTAGGGCTCAGAAGACCTTGCTCTTTGATGCTTCATTTCCTTGATGACAGGGAATATATTGAGCTCCCAGGAGGTGGATAGTCCCAGGTATAATAAGTCCAGTTCTGCCAAGTTCCAACTCATCAAAATAGGCAATTAGAACTTCCTTTTGCATTCGTCATCTTTTACTGCTAAATTTGGGTATTGGTTTGCTTCATTTCTATCAGGGCCAGACGATTCCCAAAGGCTGTGGGCCCTCAGAGGCATCAGGAGAAATGTGTGTTTGTTGCTCTCAATACCAACCTTCTGAGAAGTAAGAACCATCCTGGATATGTAGCTGCTGCACATATATGGAAAAGTTATGTGCAAACCAAGCCGATTATCTCCAAGACATATTTTACTGCCAGGTATCTTGCAGTTTCTTCTTCATAACCCTAAAACTCTGCTGTCCTGTTTCTGACCAATTGAAAGAAGTACTTTTCAGCATGTCAGAAAACATAGGTGCTTTTGATGGTGCGTTCTTTGTAGAAATATCGTCATAATCTGAAGACCTTGGAAGATGGTATTGAATTTTCAAAAACGTAGAGGCAGTTTTATCCTTCTTATGGCACAGAACTCGAAGAAGGGTATGGGCATCATGTACATGTCTTCTTCGAGTAGTTGTAAGTTCAAGATGGTGAGGCAATTGATCACTTACATTTATTAACATGTCAATGATTGTATCAGCCTTTAACACAAATAGGTCTAGTATTTGATGAGTTAGTCTAGCCTCCTTTTCAACTAAATCCAATGGTAAACCTTGGCCTTCAGCTATAAAGAGATCCTTGATCATAGCAAGATCTTGATGCATCAAGTCCACATCTGTCTCCAAAAATGCTCGGGATGGGCCTCCATCCAGTAGGATCCAAATAAGCCCTTCCATGCATGCTTGAAATACTCTCAGCACAACTTGGTCACGTAGGGCATCAACAATCAGATCACATACCTGGTCAAGAACTTGATCAATAGTAGGGATAAACATCTCCATACGTGCACTTTCAACACTAGCACGGTACAAGGAGAAAAGTAACGAGTCCCGCATATCCCAGAATACAGCCCTTGTTCCAATGAAGTTCAGGATTCTGTCAGTTGTACTCACTGCAGTCCTTCGCACATCATCAAATATTGTAAACAACTCATCGATTGATTCTTCAGAAGATAAGTTTTTTGGGAGAGTTCGTCCACTAGCAATGCAAGACAAATAGTCTAGCAATCCCACAGCTGACTGAACTGAGACCCAAGATTGTTTGATACCTTCTTCTATGTTATCGAGCTGATCCCTAATGAATTGAAGAGTGTTGAGTTTCGCACATAATTTAGGAACCGTCAAATTGTTCAATTTATTAGCCACCTTCTCTTCAGGAACTGTAGGCACAATGAGTTTCCTTTTTGCAAATGGGTTCACTGATTCTGCATAACGTGTCAAGACTGGAGCACTGGGAAGCAAGGTAGCTCTAGGAACTTGTTGATTTTCCATGTGATGCAAGTAGACTTGAAGGCTACTAGTAATTCCAATAAGTAGACTTCGCAAGTGGACAGTATCCAGAGGAAGACTCGAGTTAAAGAACTGTTCAATGGTCTCCTCCACTATCCGGAATACTTCAACCACAGATGTTGCATGTCTTTCATGAGCTGATAGAGGCTCCCAATCCTCTATCTCAATGGTACGTTTTGTCCACTCCAAGACATTCTCATGTTGAACATGCAGCCATTGAAGAATGAGAGGTGAAGAAAATTGACTGATCATGTATGGCTTTAAATATTTGGACAGCAAAGAACCAACAGCTCCCTCATTCATTAAGTAAAGCTTCTTAGCTACACAAAGCTCAAAATTATTTGTTGCTGCCAGTATCTCTTTCAAACTTTCTGAATTATCCATCCTTTCCAAAAATAGCTCCAGCTGTTGCCCATACAGTAGGTGCAAGAGAACCAGAGCTACTCTTCCAGCTTCAGGGTATCGTTTACAAAGTGTTGGACTGAAAATAGTACACTCTTTCTCCGCCACTAGCTTTAATTCGTTTGCAAGAATTATTAATGGATGCTTAAATTCTGCCTTTGATTGGCAATCTGATGAAATTAGGGCATGCTTATATGCAGCTTGAATGGATCTGACAACAAGAATGTGAATCAACTTAGATTCTTGTGTAGCATCTAGTGGGGTCCCAATGAGCATGGCTTTTTCATCATCATCATCATCATCAGTGCGGCTTGTTTCTGAAATAACTACCAAGTTTAGCATGCCCTCAAAGATTGAGTTGTCAACCTTATTAAAGTATGAATGATAATTCTCCAATTGTCTAAAACACCACTTATTTATTTTAAGAATAGCACTGTCAACCAAACTTAGAGCCATGTTTCCGCCACAGGCTTCCGCTGAACAAACAAAGCTGTTTGTATACAACTCTATTTCTTTAGCATCATTATGTAATCGAAGCTTCTGTGTTTGAAGGCATGTGTGCTTAAGTAGAAGAATTTCCCCAGTTTCAGCAAACTTCTTGAAAAGCACCCAAGCAAAGAGTGTGTCATGCAATTTCTGGGTGATACCCAATATAGTCCAGGTCAGCTTTACTGTTTCCAGTATTTCATCAGCCTCCTCCACAAGCTGCCCATCTTCGAGAATATCGAACACGATGCAAAGTAATTTCTCATATAGTCTAAAGTTGAGATGATAGCTCTGGATCCAATGATAGGTCTCGCCTTTAAGGTTGAATTTCTTTGGGGCTTCACATAATTTTGCGTTGTATCTTTCAATGATAGTCAATACCTCAACAGGCCCATCAGGGACACTAACTACCCAATCCTCTGTATCTCTTATCTTAGAGAGAACTATCCGCAATGTTTCACTCATACCATACTCACGCGATCCTGGGAAGAGAAGTAATTCTTCGAGAACATTTGCCTGTCTTCTCTGCCACTGCACTCGCAGTCTTTCTGTAGGGAAATCAGATTTCCCAACAGAACTTAAGAGCTGTAATGATATGCAAGGCACGTCAAGTTGCCCTTGCACGATCCTCAAACTGATATGTCTTAAAGCTCGCCTTGTCAATGTATCCATAGATTCAGAGATCTCCATTTGTACACGGATCAAATCAAGAAGTTGGGAATAATGATTTTCTGGCTGAGGAGATGGATTTGATACTTCTGTTTTAGACCTTAGACCTTTTAAGAATTTAGGCTTCTTTTCTTTCTTCTCTTCGGAGAACAGTATTTTTCCGCTGACAAATAGTGAGGCAAGAAGGACCTCATAAGCTGTTTCTCTTATATCGTCATCTGACAATTCTTAAAAAGTGAAAAGAAGTTTACAATAAGTTCAAGAAAACAAATTAGGTAATCCGCAGTTGATCTTACTAAACAAGATTAGAGAAAATGATAATGATTACAGGGACATTATATCTGACAAAGATTCAGTGGAGCTGTATCGAAAAAATATATATAAGAGCACAACAAAATGAAGCATGCACAATTTTATACCTGTGCTTAATTTAGGTAGACCTAGTGAAAGAATATCCATTTTATTTACTTGCTTAGGATATATATCTGCCAGACTAACATCCTTAGTACCATTATCTGTTCCCAAAATGTTAATAGCTGCTCTAAAAAAATCAACATGTTCTCTAATTGGAGTTGGGTTCTCTTCAGCAGGTGCTTGAGGGACAATGTCAGGTGCTGCTTTGTTTGGAGGGGAACCAGAGCGTTCTGGCCTTGAAAGAAGAAAATATGAATTCACTGATGGAGAGCCCATCATGATCGGGTATCTCCTCTCGTCAAAATACCTCCTGGTGGCCTCTGAGGCATCAAACTGCACGCCGGAGGCGACGCAGCCGAGGGCGTAGTCGGCGCTGACGGCGTCGAGGTCCACGCGGGAGAGGTCGACGGCGCGGCCGCCGGCGGAAGAGAGGATGAATCCGAGGAGGGCGCGGCGATCGCGGCGGTACACCTCTAGTAGCGCCGCCGAGTCCATGGCTGCTCCGCAGCCTCGCCCTCGCGCGCGGCGGCTCCCCTACCTACGAGGGTTTCGGGAACTCGCGGGGGAGGGAGGAGGAAGGAAGCGGAGACCGGAAGAGGGAATCAGGCCGGGAGGGAAAGCTGCGGGGCCGCGACTGCGAGTGCGGAGTGCACAGCGAAAGCAGCTGAGAGAGGAAGAAAGGGGAATGAATGGGGGGAGGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0276500.1 | 4 | 28589321 | C | T |
| Osa04LNT0276500.1 | 4 | 28575788 | C | A |
| Osa04LNT0276500.1 | 4 | 28576437 | A | T |
| Osa04LNT0276500.1 | 4 | 28578422 | C | A |
| Osa04LNT0276500.1 | 4 | 28578730 | T | C |
| Osa04LNT0276500.1 | 4 | 28579173 | T | C |
| Osa04LNT0276500.1 | 4 | 28579589 | T | C |
| Osa04LNT0276500.1 | 4 | 28580213 | A | C |
| Osa04LNT0276500.1 | 4 | 28580316 | T | C |
| Osa04LNT0276500.1 | 4 | 28580378 | T | C |
| Osa04LNT0276500.1 | 4 | 28580962 | G | T |
| Osa04LNT0276500.1 | 4 | 28582271 | C | T |
| Osa04LNT0276500.1 | 4 | 28585062 | A | G |
| Osa04LNT0276500.1 | 4 | 28585546 | A | G |
| Osa04LNT0276500.1 | 4 | 28585856 | T | C |
| Osa04LNT0276500.1 | 4 | 28586308 | A | G |
| Osa04LNT0276500.1 | 4 | 28588345 | C | G |
| Osa04LNT0276500.1 | 4 | 28575881 | A | C |
| Osa04LNT0276500.1 | 4 | 28576981 | G | C |
| Osa04LNT0276500.1 | 4 | 28588641 | A | T |
| Osa04LNT0276500.1 | 4 | 28588744 | A | G |
| Osa04LNT0276500.1 | 4 | 28589308 | T | C |
| Osa04LNT0276500.1 | 4 | 28586322 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0276500.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 11.346 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR171g | Translation | 3.5 | 16.448 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR171h | Cleavage | 4.5 | 12.834 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR1429-3p | Cleavage | 4.5 | 20.66 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR1854-3p | Cleavage | 4.5 | 16.791 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR1857-5p | Cleavage | 4.0 | 7.909 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR1866-3p | Translation | 4.5 | 6.712 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR1870-3p | Cleavage | 4.0 | 20.457 | 1 | 24 |
| Osa04LNT0276500.1 | osa-miR2095-5p | Cleavage | 5.0 | 15.299 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR2118h | Cleavage | 4.5 | 24.402 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR2118k | Cleavage | 4.5 | 24.402 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR2118o | Cleavage | 4.0 | 24.402 | 1 | 22 |
| Osa04LNT0276500.1 | osa-miR2878-5p | Cleavage | 4.0 | 14.626 | 1 | 24 |
| Osa04LNT0276500.1 | osa-miR812o-5p | Cleavage | 4.0 | 21.273 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR5337a | Translation | 4.0 | 17.332 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR5489 | Cleavage | 3.5 | 17.578 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR5491 | Cleavage | 4.0 | 17.333 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR5519 | Translation | 4.0 | 15.682 | 1 | 21 |
| Osa04LNT0276500.1 | osa-miR5521 | Cleavage | 5.0 | 21.455 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0276500.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0276500.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0276500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0276500.1 | 4 | nan | Morphological trait | Root | RM3288 | RM5503 |
| Osa04LNT0276500.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0276500.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)