© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0277100.1
GATCATAGTAGGTCGTGCCGTTTTAGTCGATCAAAATGTTACTCCAATGTGTTTCAGTATATTGCTATACTAGTGTTTCAGTAAGCGCCGGAGCGCAGCAAAAGTTCCAATGTGCTTACGTATCTCTACAATTCTGCAGCACAAGGAGAGGTAAAGTAATTAACCTGAAAATTAACTAATTATCAAGGCTTTAGCATGAAGCGGTGGTGCTGCCGCTGCCGCTTGACGTGAAGCTGACGCCGCTCATGGACCCTCCGCTGCCGCCCAGACCAGACGCCTTCTCCTTGGCCGCCCTCCGGATGTCGGCTTCCCGGCGGTCGGCGAAGGACAGGAAGGACTGGAGCTTGCTGCGCCGGGAGAGGGAGCGGCTGCCGTCGCTGGCGGACGGCTGCAGCGCAGCGGGGTCCTCCTCCGCGGCGTGGCGGGAGTACTGGTAGAAGAGGTTGCAGGCGTGTATGGCGAGGGCGAAGATGCAGGCGAGGCCGCAGATGAGGAACAGCGCCGAGAAGCTGTACACGTCCAGCCGGTCCGGATCCTGATCCAGCTCGCTGGCCTGCGACATGGACGACATGTCGCTCGCCAGCCACTTGTCGTGGATCCTCTGCAGGTCGCCGTTCTCCGACAGCTCCAGGATCGCCGTCGACAGGTCCACTGACAGCGGCGAGTCCCTCGGGAACGCGAAGCCCCAGCCGCTCTTGGTGAACTCGGAGCCCACGACGGCGAACTTAGGGTTCTGATACAAGAAGAGCTCAATGTACGGGCGCTCGTCGACGATGGCCGCAACGCCTCCTTTGCTGGGGCCAAGGTCAAGTGCCTTCTTGTACTCCTCTGGTGAGCCGAGCGCCTTAAGCCTCGAGTGGGCAACGCCGAGCTCCTGGGCGAGGTAGTTCTCCGCGAAGGACCCGACCTGAAACCCGATGGGAACGTCGCTGGTGATCAAGCTGTCGATCCCGGTGATCGGCGACGTGAGCTGCTGCACGGTGAGTATGGAGGTCAGGCTGGCAGTGTAGCTCGACTGGATGATCAGAACGACGAACAGCCATATGATGATCACGAAGCGGCCGAGAGTGCTCCTGGTGTCCTCTCTGTGTGCGAAAAACAGAGTTGAGAAACTGAACCAGAACACAGTAATAAGCTGTTTCGCAGGAGGGCCACGGAATTCATCATTGATTCTATGTTCAAGCATCCAAACTACTGTCCCTATGATAAGAAAGAACAGTCCAGTGACGGTCCACATCTTGATCGTGAATGGCTGCAGAAAGGCCCATCCACCCGAGTTCTGCCTCTTAACAGAGGTAAGGACCACAAGCCCAGACGACACATATGGCTGAGTGAAATCAACAACCTTTGTTCGATTTGTGATGATAGTTACATCGCCTACCACAGCATCAAAGTCATCTGTTATAATTTTATTGATAAGCTCCGAATAGCTTGGATTCTCCCTGTTGTTCCCAAAAGGTACAAACCTATACGGAACTGGATATGCTAACAAGTTTATTGCAGCGACAAACACATCAATACAGAGTCCCCGCACCATTCCAGTTTCACTATCAACTGATACAAATTGACGGTAACTTACCCTATCGGGAACTCCAATCTTTATCTCATTTCCATTGTTAGGAAAAACCCATCCCCGAGGCTTATTTATAGTCTCACCTGGCCAGATCACATCATGAAGTTTTTGAGTTTCTCTAGTACGATTTGCTGGTTTCTTGTAGAGAGTCTCAGGAGATATAACTGATAGCCCAGAATAGTTGGACCAGTAACCAACTGTCCGCAAACCAGATCCTATTATGCTGACAATGTCATATGCAGGCTGGATAAGATTACCACCTGAATCAAATTTTACTGGGCCAGTTGCACCCAAGAAGTCTACCTGGTGGATTTTTTCTAGTAGCAGCTGTCCGCCGTCAAAGACACTCAATGCTTCCAAATTCAACCCTCTTCCTGAAATTTCATTTAGTTTGGGGTCAGGAGAGAAAGAAATGTTTCCGCCACTATTGAAAAATGCATCCAGCGCATGAGCAAGCATCCAGACAGTATCATAAGCATACAGGCCATAAGTACTAAGCAAGAATCTGCTGTGACCACTATCCTCCTTAAGCAATTCACTCCATTTTGAAGACAACATACTCTTCCTTCTGGTATTTTCAGTGTGGTGACGCAATGTAAGAACACCCTGCATTGTGCTCAGTAATCCAATGTCGAGATGTACCGATGGATCAAGGTATGAAGTGAGCCAATCTGTTGCAATCCACGCATACCCATTGGATACCATGCCAAGTTTGAGTGCTTGTTGGAAAACCACAAGTCCAGAGTCGGGATTCGCATGCAGGATGATGACCCGAGACTCCATCATTGCAACCTTGATCAGCACATCAGCTATTTCATTGTTGCTTGCTCCTGGCCTAAATGGAGCTTTATACAGGATCTTAGATCGCCTCTTGGAAAGTTCATCGCCTAAAGAGGATATTGCATTTCTTCCATAATCATTATCCACAAATATGGTTGTCACTTGCTTCCACCCATAATACTCAACTAAGTCAGCAACAGCAGTCATTTGAAATTGATCACTGACGGTAGTCCGCACAAAGAACGGATACTCAAGTGACGAAAGAGTTGGATCAGTTGCAGAAAAGGACATCAGAGGTACGTGGAGTTCATTTGCAAGATGAGAAAGGACATGGGCGGTGGTAGAAGACAATGGGCCGATGATTGCCACTGTATCTTTCTCCATGAATTGCAAGGCTTGCACAATGCCAAGAAAGCGATTGCAACTGGAATCATGCATATGAAGATCCAGCTTTGTTCCCGGAAGGATATTCGAATCATTGTTGATGTCATTGACAGCAGCAAGGACGGCAACTGCGGCAACTCTCCCAATTGTTGAATTCCTTGCGAACTGAGCTCCAATTCTCACTGCATCGGGCCTCCCAGAGATGTTTTGGCTTTGTGCGCAGGAACACAGACAACAGAAAATACTGAACAGATAGAAAATGAACTTCATGGTGACAAAGTGACCTAGAGGATTAATGTAGTGCTCTTTTGGAATTCATCCTTCAACGTAACAACGCACATGCTGGAATAACCGAGGAAAAATTCCTGACGATGCCATTTGGGTCTGAAGCAACCTCTTATTGGTAGGTAGTTGCTTCTGCTCGGATGACACGAGATAGCTGTGAAGAACTAGCAGCCCGTGTGAACAGGAACAATTCTGGTGACCTCCCGAAGCCTCACCAAATGTGCCACTGCAGCGGGTTCTGTTTCTCAAGACCTCGCTTGCAGTTCGCCTAGCTATATCATGGCAACTGTTTGGAGCCCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0277100.1 | 4 | 29566726 | C | A |
| Osa04LNT0277100.1 | 4 | 29569992 | T | A |
| Osa04LNT0277100.1 | 4 | 29567859 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0277100.1 | osa-miR5792 | Cleavage | 5.0 | 19.448 | 1 | 24 |
| Osa04LNT0277100.1 | osa-miR6251 | Cleavage | 4.5 | 19.522 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR6251 | Cleavage | 4.5 | 21.362 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439a | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439b | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439c | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439d | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439e | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439f | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439g | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439h | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR439i | Translation | 5.0 | 20.055 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR444d.3 | Cleavage | 4.0 | 18.468 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR444d.3 | Cleavage | 5.0 | 21.206 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR1862d | Cleavage | 5.0 | 18.874 | 1 | 24 |
| Osa04LNT0277100.1 | osa-miR2121a | Cleavage | 4.0 | 10.869 | 1 | 24 |
| Osa04LNT0277100.1 | osa-miR2121b | Cleavage | 4.0 | 10.869 | 1 | 24 |
| Osa04LNT0277100.1 | osa-miR2918 | Cleavage | 4.5 | 23.682 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR5077 | Translation | 4.5 | 16.972 | 1 | 19 |
| Osa04LNT0277100.1 | osa-miR5081 | Translation | 4.5 | 11.746 | 1 | 22 |
| Osa04LNT0277100.1 | osa-miR5144-5p | Cleavage | 4.5 | 19.596 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR5509 | Translation | 5.0 | 17.197 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR5509 | Translation | 5.0 | 20.043 | 1 | 21 |
| Osa04LNT0277100.1 | osa-miR395f | Cleavage | 5.0 | 11.309 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0277100.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0277100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0277100.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0277100.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Osa04LNT0277100.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0277100.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM255 |
| Osa04LNT0277100.1 | 4 | nan | Morphological trait | Root | RM3288 | RM5503 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)