© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0277500.1
CACTGCATTGCATCCCTATCATTTGAGATTCATCAAGACAAATTTTCATCACAATACAATTCACCAAGCATAGAAGAGATGCCAAATCCCAGACATAGGCATATATTTTGGTAAAAATTGGTTGTAATGAATAAGCATACAAGCTGATCATGGTCCATGTCACTTAAAGCAAATACTCAAATCTTTGAGACAATAGCTAGCACCAGATTATTTAGTTCATTGGTCCTAGAACATGCAGTTGAAACTTGAGAATACACCTTTTCTGATCAGCTCTAATGATGCTACTTATATTGCTTCATAACTTAGCAAGTCAGCACAGAAGTGGTCCTCGTCGTTGTCATCTTCATCGGTTTTAGAAATATTCATCAATGATGGGGCCCTCCTCCTCATCTTCATCAAACTCAGAACTATCAGATTCATCTTGTTGTAGCACATTGGATCCATTTAGAAGCTGCAAGTCCTTGTCATTGACAATGCCTTCGGCATCTCTAGTGGTGGCTTCAGAAACATTATGGAGTCCTTCCATAAGATCAACTACAAAAGTGCCTTGGAGACCATCTTCTTGGAAATAATGGACATTATCATTGTTGGGAAGAAAGTCGTAGTCCTTATCCACAGGGGCTGCTATTTTTCCAGTTGGCTGAACCTTGTAAACTACCCACCAATCGATCAGGGCTGGTACAGATTTGCATGGGTATGGTATGTAATAAACTTGTGTGGCTTGATGAGCTACAACAAATGGCTCATACACTGCAAGTGTTGATGAATGGGCAACTTCCACTAAACCATACTGTGGGGTGTACCTTGTTTGGGCAGGGTCAAACCAATGGCAGTTGAAAAGCACAAGAGTGAGTTCACTATCACCATGAAAACTAAGTTCAATTATTTCTTTGATGTAGCCATAATAATCAGTGATATCACTATTTTCTCCTTGTCCTATTGTCACCAAGCACTATTTATGGTGGTTGCATTTGGCCTCTCCTTCTCATATTTATTTGTACGGAATCGATAGCCATTCACATCATAAATACTATAGGTCTTCACTCTAGTATGGCATCCTTTAGCTACTTGCTTCAGATCATCATTCATATTCATGTCTATAAGACTTTGTTGGTAGAACCAGGTTACGAAATTAGGACAACCATTCCTAGCACCATTCCGTAAGAGGTTCTCCTTTTGCTGTCTTGTTGGCTCGCCTCGTCTACTCCACTCCTCATGTAAGAATTTCCCAACGTAGTCATCCACTTCAGGCAGGTTTGTGAGGACGTACAACATGGCAGCCTCCCACTCCACTTCAGTTAAGTGTCTAGTGACTCCTCGGCTAGTAGAATCACCCTTAATAGAGAAGAGGCTAAGTGAGCATTCTCTCGACTCAACAGTAACATTGTACCGAGGGACTGGATTGTGAACTGTGTACACTTGATCAGCAAAGTATATGGTTGTGAAGTTTGCGATTTCATCTAGTATATATGCTTCTGCTATAGATGCTTCAACACGAGCTCGGTTTTTTACTTTGCTCTTAAGATCCTTTTGGTCTCTTTCACCTGGATACATCCATCGGTACTGTACTGGCCCTCCCATCCTTGCTTCGTATGGTAGGTGAAGAATTAGATGCTGCATTGGATTAAAAAATCCGGATGGAAAGATCATTTCTAACTTACAAAGCAAAACAGGCACTTGAAGTTCCATGCTTTCAAGCTCAATTGGATCTACCTCTTTTGCACACAATTTACGATAAAAGAAGCTCAACTCCGCTATCACTTCCCACAAATAAGGTTGAAAGTAGCCACGGAACATGACTGGTAAAAGGCGTTCCATCATTATGTGGTAGTCATGGCTTTTTAACCCATTGATTCGCATCTTTTTGAAGTTCACTCCTCTCCTTAGGTTTGATCCATACCCATCAGGGAATTTGAGTGTTTGAAACCATTCTAATATTTCCTTCTTTTGAGTCCTATTCAAACAAAAATCAGCTCTTGGCTTCAACCACTGCCCAGATGTTTGCCTCCGGATCATGTTAAGATCAGGTCGGTTACAGAGTATTGCTTGATCAAGTCGAGCCTTCACATTATCCTTCGTTTTCTCTGGTATATCGAAACAAGTGTTAAATATTGCCTCAGCAACATTTTTTTCATTGTGCATGACATCAATGTTATGAGGAAGTACTAATTTATGGAAGTATGGGAGCCTCCACAAGCCTGGAATGTGTGTCCAATTGTGATCCTCACCGTAACCTTCAAACCCCTCTCCATTGGCAGCAGGTTGCAGACGTTGCAAGCGAACATGAACCTCTTCAGTTTTGAACCGATGAGGTGGTTCAGTCGTAACAGTAGTATTTGCAAGAAAAGAGTTTGGGTCATTTCTAAAAATGTGACCATGAGGAAGGAATTGTCTATGGCAATCAAAGAAGGAGTACTTTCCACCAAACTTCAGCCGTCTTCCTTTAAGCACCTCCATACAGACTGGACATGGCATCTTACCATGTACACACCACCCACAAAATATCCCATAGGCTGGAAGATCATGGAACGAGAATAAATATGACACCCGCATGTTAAAATTCTGTTTAGTGGCCCGATCATATGTCTGCACACCATGCTCCCAGGCATGGAGTAGGTCATCAACTAGAGGCTCCATGTACATACTAATTTTCTTGCCGGGATAATCAGGTCCAGGGATAATCAAACTAAGGAACATGTTGTGTTTCTGCATGCAAACACCAGGTGGAAGGTTGAGAGGGATGACAAACACAGGCCAGCAGGTGTAGGAGGCAGCACCCATACCAAATGGATTAAACCCATCTGTTGCTATTGCAATCCTAACATTCCGAGCGTCTGATGCAAATTCCGAAAAGTCGCGATCAAATTGCTTCCATGCTTCAGCATCAGCGGTGTGTACTATCTTGTTAGGATGGTACCTATGGCCATACTTGTGCCAAGTCATTTGCTTGGCTTGTGGTTCAGACATGTATAACCGTTGAAGTCTTGGGATGAATGGTATATAACGAAGGACTTTCATTGGAATATTTAGTTGCTTCTTTTCACCATAGCTGTTCTGCACCTCCACATATCTACTCTCACCACACTTGTCACAATGGGTCTTCTCTGAATTTTCCTCTCTAAAGAGCATGCAATATTTTGGGCATACATCTATTTTCTCATATGGCATGGTCAGTGCACTTAGAAATTTCTTAGCCTCATATAAATTGAGAGGTAGCTTGTGGCCTTGTGGAAGGAGAGCACCAAACACATTCAACAATGCATCAAACCCTGATTACGCTTTCTACGTCCATTGTACATCCAACTGCGATCCTCTTCCATCCTTTTTTGACAGTGTTCTTTCAGGAGAGGCCACAGGCTCCAGTGCTCCAGATGGCGATGGTGGCCAGCAGCGTCGTTGCGGCCGATGAGGGCGTCCTGCGGCTGCGCTCCGCGCGGAGGCTCCCAGCAGGAGAGGGGCCTGCGACTCCGACGAAGGAGGCTGACGACCGCGCAGGCCAAGAAAACGGGGCTGACGGAGGGTCTCCGAGAAGAAAGGTGGCTGCAATCCGGACGGACGGAGAAGGCAGCCGACGGCGTTGAAGCTGGAGAAAGCAGCCGGTCGCGTTGCAGGCAGGCGCCGCGCGCGGGAGAGGAAAGAGGTGGGCGGCGGCGGAATCGATTCTAGGGTTGGCTGTGAGGGAGTTCGCGCGAAAACAAAATTGGGGAAAGCGTGTTCGGCTGATAGAACAAGCTGCAGTAGAGAAACA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0277500.1 | 4 | 29676807 | A | G |
| Osa04LNT0277500.1 | 4 | 29677029 | T | C |
| Osa04LNT0277500.1 | 4 | 29677256 | G | A |
| Osa04LNT0277500.1 | 4 | 29677286 | T | G |
| Osa04LNT0277500.1 | 4 | 29677487 | T | C |
| Osa04LNT0277500.1 | 4 | 29678245 | G | A |
| Osa04LNT0277500.1 | 4 | 29679199 | T | C |
| Osa04LNT0277500.1 | 4 | 29679581 | C | T |
| Osa04LNT0277500.1 | 4 | 29679621 | A | G |
| Osa04LNT0277500.1 | 4 | 29679711 | T | C |
| Osa04LNT0277500.1 | 4 | 29679717 | A | T |
| Osa04LNT0277500.1 | 4 | 29680667 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0277500.1 | osa-miR5830 | Cleavage | 4.5 | 12.697 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR5837.2 | Cleavage | 4.5 | 11.904 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR5079b | Translation | 5.0 | 11.997 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR398b | Cleavage | 5.0 | 14.011 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR169f.2 | Cleavage | 3.0 | 13.066 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR169n | Cleavage | 5.0 | 21.266 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR169o | Cleavage | 5.0 | 21.266 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR171g | Translation | 3.5 | 20.067 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR1868 | Cleavage | 5.0 | 13.599 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR396f-5p | Cleavage | 5.0 | 18.101 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR396f-3p | Translation | 4.0 | 12.433 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR2105 | Cleavage | 4.0 | 13.504 | 1 | 20 |
| Osa04LNT0277500.1 | osa-miR2905 | Translation | 5.0 | 23.818 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR2876-3p | Translation | 5.0 | 19.44 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR2907a | Translation | 5.0 | 19.903 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR2907b | Translation | 5.0 | 19.903 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR2907c | Translation | 5.0 | 19.903 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR2907d | Translation | 5.0 | 19.903 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR2922 | Translation | 5.0 | 19.236 | 1 | 20 |
| Osa04LNT0277500.1 | osa-miR5079a | Translation | 5.0 | 11.997 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR5156 | Translation | 4.5 | 19.774 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR5157a-3p | Cleavage | 4.0 | 17.063 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR5157b-3p | Cleavage | 4.0 | 17.063 | 1 | 24 |
| Osa04LNT0277500.1 | osa-miR5484 | Translation | 4.0 | 13.288 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR5486 | Cleavage | 4.0 | 19.886 | 1 | 21 |
| Osa04LNT0277500.1 | osa-miR5523 | Translation | 5.0 | 23.863 | 1 | 22 |
| Osa04LNT0277500.1 | osa-miR5525 | Cleavage | 5.0 | 12.804 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0277500.1 | 4 | nan | Morphological trait | Root | RM3288 | RM5503 |
| Osa04LNT0277500.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0277500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0277500.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0277500.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0277500.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM255 |
| Osa04LNT0277500.1 | 4 | qPN-4b | Resistance or Tolerance | Drought tolerance | RM317 | RM255 |
| Osa04LNT0277500.1 | 4 | Xa2 | Resistance or Tolerance | Bacterial blight resistance | RM317 | RM349 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)