© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0279700.1
GGTATAGAGTATAGACAACCTTTCATTCTGATGATATGCAGGGAATAAGCAACCGTGGCCTATTCCTCCGAAACAGTATGGCGCCATATTGGTGGGTGCGCCCTCGCATTTTTCTTTTTTCTGATATAAGCTGGGGTTTAGTTGTTTTACATCCCAATATACAACATAACAAGGAAATAGAAAAGAGGGGGGTAGGGTACACCACATCTTTTACATACAGAAGTTGAGGGTGTATTTACCTGCCTAATTTCTAAGTTGACACTGTCACATTAGTCATATTAGCTTGCTGGCTCAATAAAAAAACAAAATCAAATGTGCCGCACCTCTGAGCTGCTGCATCTAACATCAGAAAGCGATCGACACCACCAATATGAATGTGAACAAAACAAATCAAGCCTATCCATGTCAGTCATCAATATCTTGGACCCACTGTAAGCCTGTTAATACTGACTCCACAGCTGAATTCGGAATGAGTAGTCCAACGATTCGCTGATTGTCAGTTGTTGTCTCTAAACGGACAACACGTACTCGCTTGTGACTTTGACGAACCTGCTTAGCTAGGGCCTTTTCTATTGTACCCCAAACTGGAAGTATGAGACCACCCAAGATGTTAACCTCTTGCAACCTTCTTCCCACTGTACAGTAGCTTCCCACTTTGCATTTCGATCCATGCATACACTGCTTGGACGAAGCATCATATTCATCTTGCCAACCTTTGTTAACCTTTTCTATTGATGACACTTTCCTGTACTTGCTTTTCAGTTCTGTTAAAGGCATTTCTCTTAATGCTTCACCAATAGCAGGTCGAATTATTTTATACATCCCTTCGATTGAGCCTTCAAAAGCAAGTATGAAATGCCTTCCTCCCATCCATTCCCTTTTGGACTCGTAAAACCCATCATTAGAAGAACCAGCACCATCCTTTTGCCTCTCATCAAGCATTGATTTTGCCGTCTCCCAAGTAACTCCTCGGTCAATGGTGAAAGTAAAAAGTACAGTTGACGCGCCTGACAAGCTATCAATGTGAACGGTCTTGGGTGATTCTTTCATTTCAACATTTTTAGCTTTTATATCAACGATTCCAGAATCCAGCTGCCCTTCTATTCGTGCATTGTGCAAAACAACATCAAGTATACTTGTAAAAAGATCAAATAACCTATTCTGGATTTTCGGAGCCAGTCCCAAAAGGCGGTTAAGAAAACGAGCAACATCATGCATATCTGAGTCAACAATCCGACCAGAAAGCTTCCCAGCAACTTTTCCATTGCACACTACAGCATCCCTGATAATCCCAACTGATACTAGAGCAGCTTTTGCTTCAGCAATGAACTCTTGGATGCTAGATTGATTGTCAGAACACCCCGGAGGAACAACTGGAAAAGAATCCTGCTCCATTATTCCTCTATACATGATGGTTAGGGCTTTTTTCCCATAATTGCTGTCGTAGTTAAAAGCACTCAGAGAAGGTCCAGCCCTGCGATCTCCTTGCGTTAAAGCTCCTAGAGACTCCAGTCTTTTTGCTACGATTGATGCAAATCGCTTTTCACCACCAAGATTTGTAAAGAGAAGCCTATATTGTGGTGCAGAAGTTTGATTAGAACGATGAGTTCTCCCAAACTGTTGTATTGCACGATCTGCACTCCAAGGGAGCTCAAGTGTTATGTGTACTCTTCTTCTCTGGTTTTTTGCCCTTCTATCAGCATGCAGCGAAACGCCAGCTGATCCTGCTTCAGATATAATAGATATTAGTTTTTTGCCATCCATGAACTGCTGTTTTTCATGCATATTGATCATCTCCATCGACACTTCTTTCGCATTCCGCGCCTGATAAACAACGCCTTTTCCGTCAGAAGCTCTTATTAGCATACCACGCCGTCCAGTTATTTCTGCAACATTGTCAGGGCCTCCTAGCTGATCAATGATGTCATCAAGAGGATTGTTAGGGAGATCCAAAGAACGTATCATATCCAAAATCTTCTTTTTTTTCTCTACTGCAGCATCATACCTCTGTGAAAAATCAGCTACATGAGCATCTTGTTCATTTTCCTCTCCTTCTAACTTCTTGCATGTGTAGCATGACCAGTCATCAGTTAATACCCCAGTCCAAGGTGGTGTCAGACAACCAGGGTGAACATGTCGAGAACAACCAGAACAATGAAGCAACAGAGTCTTCTCCTCCTCTGTGTTACAGATTTGACACATGTGAAACTCCTCATCAGACTCTGTCGATCCATGATCTGACTCAGATGGAGAGTAATCATCACTGTCATCATCACTCACTTCTACCAGTTTTGCTACTTTTCTAACACGTCCTTTAAATGATACATCTGGGGCAGAATGCCGCTTACGGTGAATTTCTGTGACTTTTTCTTCACCTTGTTGAAAAGAATCAGGCTTCGGAGGTAGAGGGTAATTTTCTTCTACCAGCTTTAGAAGCAGCTCCCGAGGACCAGAAACAAAGTCTTCCATTTCAACACCATATTTTGTGATAGCTTCTTCTGTTCGAGCCTCTCCAGTGCTCTGAAGACCAACCACCACACACTTATTCTCTGCCAGGGCCTCCTTAGCCAACTTCACAACAGCAGGTACTTTTGCAGACATGCACATATGCCTGAAGAAACGCTGATGGCTAGCCCAATATAGCCGCCATATTTGATTTGAAATGCCTTCTGTAAATGATTCACCTGCTGATAGGAGCTCAAGGCGGAACTCAGCCCAAAATTCGGCTGCCTTTCTGTACATATTCATCATTCTTTCCTCAAGGGGAGCCTCCACAATATCAAAATCAACCCCCTTATAACTTAGTGTGCGGCAAACATACATACCCCTGGCTTTCATGTCCATGGCAACAAGTTCAAGAGCGCCCACACCACCTTTCTCGAGAGATCCTAAAAATTGCGCAAAATTCTGAAATGATGTTCCATCGCCCCAAAGTCCAAGCCGAACCATATAGCCCAAATTCCGTGGTTCTGATGCACCAGTTGCCGAGCAATAAACAACCCGTGCCTCAGGTAGCTTTTCCTGGATTTCAAGAACAGCTTTACCAGTGCGAGTGGGCTGGCTCCCTGCATCAGGAATGAGATTTTTGGCCTTGTGGCACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0279700.1 | 4 | 30897264 | A | C |
| Osa04LNT0279700.1 | 4 | 30888343 | A | G |
| Osa04LNT0279700.1 | 4 | 30888558 | G | A |
| Osa04LNT0279700.1 | 4 | 30888821 | T | C |
| Osa04LNT0279700.1 | 4 | 30889564 | C | T |
| Osa04LNT0279700.1 | 4 | 30889799 | A | G |
| Osa04LNT0279700.1 | 4 | 30890206 | A | C |
| Osa04LNT0279700.1 | 4 | 30890564 | G | A |
| Osa04LNT0279700.1 | 4 | 30895159 | C | T |
| Osa04LNT0279700.1 | 4 | 30895702 | A | G |
| Osa04LNT0279700.1 | 4 | 30897454 | C | T |
| Osa04LNT0279700.1 | 4 | 30898378 | G | A |
| Osa04LNT0279700.1 | 4 | 30898733 | G | A |
| Osa04LNT0279700.1 | 4 | 30899463 | A | C |
| Osa04LNT0279700.1 | 4 | 30899938 | A | G |
| Osa04LNT0279700.1 | 4 | 30899982 | G | T |
| Osa04LNT0279700.1 | 4 | 30900607 | G | A |
| Osa04LNT0279700.1 | 4 | 30901278 | A | G |
| Osa04LNT0279700.1 | 4 | 30901512 | G | C |
| Osa04LNT0279700.1 | 4 | 30903328 | A | C |
| Osa04LNT0279700.1 | 4 | 30903501 | T | G |
| Osa04LNT0279700.1 | 4 | 30904105 | A | G |
| Osa04LNT0279700.1 | 4 | 30904138 | C | T |
| Osa04LNT0279700.1 | 4 | 30904141 | G | A |
| Osa04LNT0279700.1 | 4 | 30904948 | G | T |
| Osa04LNT0279700.1 | 4 | 30905105 | A | G |
| Osa04LNT0279700.1 | 4 | 30896659 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0279700.1 | osa-miR395b | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395d | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395e | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395g | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395h | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395i | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395j | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395k | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395l | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395s | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395t | Translation | 4.0 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395c | Translation | 4.0 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395u | Translation | 4.0 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR164c | Translation | 4.0 | 13.933 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395m | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395n | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395p | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395q | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395r | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR810b.1 | Cleavage | 4.5 | 20.191 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR1847.1 | Translation | 5.0 | 11.733 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR1850.3 | Cleavage | 4.5 | 5.996 | 1 | 22 |
| Osa04LNT0279700.1 | osa-miR1861c | Cleavage | 4.5 | 14.204 | 1 | 22 |
| Osa04LNT0279700.1 | osa-miR1865-5p | Cleavage | 4.0 | 16.103 | 1 | 24 |
| Osa04LNT0279700.1 | osa-miR1320-5p | Cleavage | 5.0 | 16.329 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR395y | Translation | 4.5 | 17.782 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR5487 | Translation | 4.0 | 15.116 | 1 | 21 |
| Osa04LNT0279700.1 | osa-miR5519 | Translation | 4.0 | 19.336 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0279700.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0279700.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0279700.1 | 4 | OsAOX1a | Resistance or Tolerance | Cold tolerance | R2737 | R740 |
| Osa04LNT0279700.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0279700.1 | 4 | nan | Morphological trait | Root | RZ23 | RM255 |
| Osa04LNT0279700.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0279700.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM255 |
| Osa04LNT0279700.1 | 4 | qPN-4b | Resistance or Tolerance | Drought tolerance | RM317 | RM255 |
| Osa04LNT0279700.1 | 4 | Xa2 | Resistance or Tolerance | Bacterial blight resistance | RM317 | RM349 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)