© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0281300.1
TGACCAGAAGTTAAAAGATTAATTAATTGACACATTCACTGGATTTTTGAAGAGAACACTAGCATTGGCACAAGACCATCAAAATTTCAATTTTCAGGTACAATGCTAATAAGATTTTGCACAACAGACGATGTCCTTGAGGACGGCAGTACAACAAGAATATGGTCATGCTGTTGCAAAAAAGAACAGAAAAACTCCCCTGTTATTCACCTTTAGGGAGGGAGTCAGGACGGTAAATCTACTTACGACATGCACGCCAATGTGCTGGTGACAATTTACATGTCTCCAGGAATTAACACCTGCTGGAAAAGCCTACAGCTCCAAATCTACTCTGCAACAGGGCTTCAGGGATCAGTCATGCTTGCACATCTACATTTGGTCCCAGTCAATAGAACTGTTGTTTTCAAAATTATAACTTGGTTGCTGTAGACGGTTGCGACCCAATCGGCTCATCATGGCAAGTCCTTCCATGACTTTGTATAGCGATGACCACCACCTATCAGATGGAACCTCATACTGAGCGAGTGTATCATCAATTTCGGTGTTGTGCTTCCCTTCGAGGACATTCTGTAGAGTGATTACTGCATCCTTTGTTTTCCTGAGGATGTTGTTTCCCTCAGCAGCCTCCAGTGCAAGAAGGTCACTGTGTGAAGAGGCAAGGCTAGCGGCAAGCGCAAACTGCGCAGCAACAGCCCATCGGTTAGATGCTACCCACTTCCTCTGGATATCTTGCATCTTGCTTTCTTCCTTTCGCAACCTCTCCTCACCATCCCCAAATACAAGAGTCTTCAGGTACTCTGCATTGCTAGGTCCTGTACTCTGAACCATCTTGGAGAAAGCACTGTGCTCATTGCTCAAAAGATTCTCAGGAGAGTCGAACTCCAAAACCTTCCCAGCACTTAGAATAAGCAACCTGTCACAGTCAATAACAGTGTTCAGGCGGTGAGCAATTATAAGCATTGTACAACTCTTGAATTCTTCCCTGATTGTCTTCTGTATAAGAGCATCTGTTCGAACATCAACAGCTGCTGTTGCCTCATCAAGAACAAGTATCTTTGCCCTCCGCAGCAATGCACGAGCTAAACTCAGTAGCTGCCGCTGTCCAACGCTAAAATTTTCACCAGCCTCAGAGACCTCAGCATCTAGTCCCAGAGCATTCCTCCTTATGACATCTTTTAGATGAGCCCTTTCAAGCGCTTCCCAGAGATCCGCATCATTGTGCTCATTAAAAGGATCCAGATTAAATCGAACAGAACCTGAAAATAGGACAGGTGCCTGTGGTATTATTCCTAGTACTTTTCGTAGGTCCCAAATTCCAAATTTAGAAGTGTCACAATCATCAACCAATATTCTCCCTCGTTCCAGTTCCACAATACGGAACAGAGCATTCAGCATGCTAGATTTACCAGCTCCTGTTCTGCCAACTATTCCTACCTTTTCGCTGCCATTAATGATGAAAGATATGCCATGAAGAACAGGAGGAAGTTCTGGTCGGTACCGAAGCACGACGTCTTCAAACTTGACAACACCAGATGATGGCCAACCAGGAGGTGGCCTGCTATCCTCAATGACAGGAGGAGCCTCAGAAGGCAACTCAATGTATGTTCCTACCCGCTCAACAGCATTTAAACTGTTTTCAGCCAGACTAGCAAGACGAAGAACAGCCGTGAGCAAATTGGTGATATTGAGGGTGTAAGTAAGAAGAAGACCCATTGTGGAGGCAAAAGCCTTTTGATTTTCTGCTCGTTGGTTTTGCATGACAGCAAATGTTGCTGTGAACCATATCATGATGCCACCCAATGTTTCCAGACGGATGGCTAGCCATCTGTTTGAACTCATGTTCACAAGAGTGAATCTGATGTTGTTGTCCATTGATTTCCCATTGATGTTTGCCATTCTATCATAGGCTTTGTAGGCACGGATTGTAGACAGACCATTCAATGCCTCTGAAAATTGAGCATACACAGGAGACCTTGTAATGGAATCCAGGCGCTTTACCTCACGAGACGTAGTCTGGTAATAGAGGTAAGCTGCATAAAATAAAATCAGAAGTGGCATGATAGCCCACAGAGACATAGTGCTAACAATGCCAATGAGAACAAATGTTGAGAGCAACTGAGATATTTGTGCCATAAACATATTCACAAAGATGGCTACATTCCTGTCAATGTCACCCAAATCCTTTGAAAATCTGTTGATGATTCGTCCAAGTGGATTGGTGTGAAAAAATACCATGGGAGCTCTTAATATAGACCGGAGCATGGCATCATGCAACCTCTTGGCTGCTCGAAGACTTGATGTGATCAGCCAATAAGAATTCGTTAGAGTGACTAGAACCTGCCCAAAAGAAAGAAGGCCGTAGATTAAATTGTAGTAACCAGGGCCATGGATTTTCGTAGAACCTTGATCTGTCCAAACGCTCAACCATGTGCTACTTGAAATGCGAAGAACTTCAGTGAGTGCATAGCAAAAAAAGAGAACAGATACCACCCAGATCCCTCCCAATGCATTTTTGTAGCGTGAAAGGACCTTTGCACTTATAACTCCAGTTTCCCTTTCTTCTTGTTTAATCAGAACAGATTTCCCCTGTTTTGTTTTATTAGAAGTGTCCTGACTCTTCTGCATATCACCATCAGCTATTACACTGCCCCCATTTTCAGGGTGTTTTATGTCATCCTGTCTTTTGCTTTCGTCCTGTTTCTCTTCCATCTGTTCTTCCATCTTTCCAGCATTTTCCATGAGCTTCTTAAAGAGTTCCCCAGAGTTGCTAAGTTCATCAAAGGTACCTTCTTCTTTAATTACACCATCATGGACTACCAGTATTTTATCCACATATGGTAGAAAATGCAGCTGATTGGTAACAAGAACCCTAGTTTTGTGCTGTAGCTCTTCTTTAATACATTTGTCAAATACCTGTCGACCAACATGGGCATCTAATGCACTCAGTGGATCATCAAATATGTAGACATCTGAATCAGAATAAACAGCTCTTGCCATTGAGACTCTCTGTTTTTGTCCCCCACTAATGTTAACTCCTCTTTCTCCAATCTCTGTTAGGTCACCACCTGGGAGTAAGTCAAGGTCATGCCGTAATGAAGTGACATCTATTGCTTTCTCGTAGCGTGGAGGTTGGAAGGGAGACCCAAACAATATATTGTCCCGGACAGTTGCATTGAAGATCCATGAAACTTGAGGAACATAAGCCACTGTTCCACGAAGGACCACCGATGTATTCGATCCTGACACTGGTGGTATTTCACCAAGCATTGCAGAAATAAGAGAAGTCTTCCCCTCCCCAGTGCTTCCTACTATTGCAACCAAACTGCCCATAGGTACATCCAGATTGACGTTTGATAATGTTGGTCTCTCAGCCTGCGATTCCCATGAAAAATATCCATTCTTAATAGAAATTGCTGGAAGCTCAGGATCAAGAGGTGGATTGGGCAGAAGTAATCTCTCTTCAGCCAAGAGGAGATCTTCCAGACGTTTCAATGACACTTTACAATTAACCACCTGAGTTATCAGATTTGGCAGCATAAAAAGTGGAAATCTTAAGACAGCAAACAGTGAAAGTGATGTGAACGCCTTTGCTGGTGTCAAGTCACCTCCCAGCAGAGAGTATACACCAAATGAAACCACAGTGACAATAACGGGGATACTGTTTAGGATGAAGCTATTCAGCGCAGCAAGCAATTGAGCGCTGCGGAACCATGAAATTTCATCATCACGGATGTCCTGCACTTTTGACTGGAAACTTTGCTCCCAAGCATAACATTTGACCGTATCCATTGCAGCTAATATTTCATTCATTAGACTGATTCTCCTGTCAGTCCTTTGCAACCCTTCCTTGGTAAGTTTTTGCATTTTGCTTATGATAACAGTCTGAATTGGGAACAAAAGAACCAACATGGCTGCACCGACCAATGCAGCAGGGCCTAGTTGTGCGTATAGAAGGACCATGGCAATAACAATGCGGAAAGGAGCAGACCATAGACTGTGAAGTTGCTGGCACACTTGCTGAAGAGATTCTGCGTCAGTTGAAATCAAATTGGTTATCCTCCCAGAGGCAAACTTCTTTCGACTATCATTAGTTAGTCGCAAAGACTTACGGAAAACAGCTGCGATCAATGTTGACCTCAACCTGAAACCCGTTCGCATGACATTCTGAAAGTACTGTGCTTCAGAAAGAACACCCAGTGACACTCCAGCGAAGATTGAGAAAGCATAGATGTAACCGCTCCAAGATGGATCACCTTTTTGCATAGACTCCAACAAGAGGTTCAATATGAGTGGGCCAACAAACTGAGAAGCATCATTGCCAATCTTAAAAAATCCTCCTAGCCAAAACCTTCCACCAAGGCTGCTATGCAGAGCCCGTAACAGCCAAGGCTTTGGTTTTTGAAGCTCATTGTTCCAGCATTTTTGGAACCGGTTGTACAATGTTTCAGTCTCATCCCAACTGTCTAATTTCCAAATATCCTTATCGGTGATGGGCCTTTTAAATCCTTGTTGCATTAGAGGAGTCATCCATGAAAAGAATATCCTGGAAAATATATTAGCATGCCTCTCAGGGCAAATCTGCTCCCCACCAGGCAGAGGTTCGTAATCAGTATTATCAACAAGTGCCTCATGCCTGACTGGAGTATAACCCGGATAGGAATCCAAGCTAGGCAGATAAACCACCATGAGAATTCCAAACAAGAGCTTGAATATTATCTCACTGCAGTACAAGTAAAATATTGAACTCGAACTATAATACTGCCTTACTGAAAGCACAAGATTGAACATAGCAGCTTCCCCAACCAAGATGTAAATGACCACAAACCGGATGTACCATCTAAACTCATAGATGTAAATTCTTGTCTCAAGTGCAATCATTACAAGCATACAACACCAAGCAGCAATCTCAATGATAGATGAGGTAACCTCAAATGGAGCAAGGCTAGTCTCCCCATCCAAGTTCATTATGGAGGTGCCAGTAGCGATCCGATACAGTGATTCAGCTATGCACAACACCACAAGCAGGCCGAGCATATAGTTGTAGTATGGCGACCGCAATTTGTAGCGCTGCACCGTGTAGTCCCTCGTCGTCCTCCATATCCGATAGAAGCAAACACCGAAGAGTGCAAAGTATGAGATGCACACCACCAAGGTTTCAGTGCCACATGGTGTGTATGCACCAAAAGCATTCTCTACATCTGACCACACCCCGCCATTGACCGGCTGGCAGTACCATTCCAGTGGATCAAAACCCATGTCAAACCGTCCCCTTAGCAACCCTCACTCAGTTTTGATCTTCCCCTCGCCTTGTTGGGATCAATCGGAGAGGAGGTGGTAGCGGAGACGAGGCGTGGGCATCTCCTCACGCGACTCGCGGTCGCGGGCACATCTCAGTCTCTCACCTCGTGGGAGGGGAGAACGAGAGAGATCAGATCATTATTTATGGGTTTTGGATTTGGAGGGCTCTTGTGTCACCGCAGGTCGTGATGGAGAGTGAACAGAAAAAAAAAGAAGATATTTTTCCTCTTTTTTATACGAGATTTGGATTCTTTCCTCGATCTTTTCCTGGCGGCTTTCTTGAGAGAGGAATCGAGGATGGTTCATTCGTCAGGGATGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0281300.1 | 4 | 31504109 | C | A |
| Osa04LNT0281300.1 | 4 | 31503376 | C | T |
| Osa04LNT0281300.1 | 4 | 31505861 | A | G |
| Osa04LNT0281300.1 | 4 | 31502980 | T | C |
| Osa04LNT0281300.1 | 4 | 31503164 | T | G |
| Osa04LNT0281300.1 | 4 | 31503579 | G | C |
| Osa04LNT0281300.1 | 4 | 31503624 | C | T |
| Osa04LNT0281300.1 | 4 | 31503629 | T | A |
| Osa04LNT0281300.1 | 4 | 31503893 | G | A |
| Osa04LNT0281300.1 | 4 | 31504466 | A | G |
| Osa04LNT0281300.1 | 4 | 31504469 | G | A |
| Osa04LNT0281300.1 | 4 | 31505186 | G | A |
| Osa04LNT0281300.1 | 4 | 31505191 | A | G |
| Osa04LNT0281300.1 | 4 | 31505231 | G | T |
| Osa04LNT0281300.1 | 4 | 31505690 | A | T |
| Osa04LNT0281300.1 | 4 | 31505846 | A | G |
| Osa04LNT0281300.1 | 4 | 31505970 | A | T |
| Osa04LNT0281300.1 | 4 | 31505981 | G | A |
| Osa04LNT0281300.1 | 4 | 31506434 | C | T |
| Osa04LNT0281300.1 | 4 | 31506890 | T | C |
| Osa04LNT0281300.1 | 4 | 31507345 | C | T |
| Osa04LNT0281300.1 | 4 | 31507536 | C | T |
| Osa04LNT0281300.1 | 4 | 31507580 | G | C |
| Osa04LNT0281300.1 | 4 | 31507819 | T | G |
| Osa04LNT0281300.1 | 4 | 31507877 | G | A |
| Osa04LNT0281300.1 | 4 | 31508050 | A | G |
| Osa04LNT0281300.1 | 4 | 31508190 | A | T |
| Osa04LNT0281300.1 | 4 | 31508274 | T | C |
| Osa04LNT0281300.1 | 4 | 31509168 | C | T |
| Osa04LNT0281300.1 | 4 | 31509177 | C | T |
| Osa04LNT0281300.1 | 4 | 31509224 | A | G |
| Osa04LNT0281300.1 | 4 | 31509228 | G | A |
| Osa04LNT0281300.1 | 4 | 31509265 | G | C |
| Osa04LNT0281300.1 | 4 | 31509277 | A | C |
| Osa04LNT0281300.1 | 4 | 31509323 | T | A |
| Osa04LNT0281300.1 | 4 | 31509863 | G | A |
| Osa04LNT0281300.1 | 4 | 31509873 | C | T |
| Osa04LNT0281300.1 | 4 | 31509878 | A | C |
| Osa04LNT0281300.1 | 4 | 31510233 | C | G |
| Osa04LNT0281300.1 | 4 | 31510264 | C | A |
| Osa04LNT0281300.1 | 4 | 31510712 | A | C |
| Osa04LNT0281300.1 | 4 | 31510915 | C | A |
| Osa04LNT0281300.1 | 4 | 31511242 | A | G |
| Osa04LNT0281300.1 | 4 | 31511390 | A | G |
| Osa04LNT0281300.1 | 4 | 31511493 | G | T |
| Osa04LNT0281300.1 | 4 | 31511938 | A | G |
| Osa04LNT0281300.1 | 4 | 31511979 | A | T |
| Osa04LNT0281300.1 | 4 | 31512238 | C | G |
| Osa04LNT0281300.1 | 4 | 31512307 | A | G |
| Osa04LNT0281300.1 | 4 | 31512410 | C | T |
| Osa04LNT0281300.1 | 4 | 31512412 | C | G |
| Osa04LNT0281300.1 | 4 | 31512504 | C | G |
| Osa04LNT0281300.1 | 4 | 31512553 | C | T |
| Osa04LNT0281300.1 | 4 | 31512833 | A | C |
| Osa04LNT0281300.1 | 4 | 31513227 | G | A |
| Osa04LNT0281300.1 | 4 | 31513260 | A | C |
| Osa04LNT0281300.1 | 4 | 31513719 | A | C |
| Osa04LNT0281300.1 | 4 | 31514034 | A | G |
| Osa04LNT0281300.1 | 4 | 31514065 | G | A |
| Osa04LNT0281300.1 | 4 | 31514248 | A | C |
| Osa04LNT0281300.1 | 4 | 31514486 | A | G |
| Osa04LNT0281300.1 | 4 | 31514488 | A | C |
| Osa04LNT0281300.1 | 4 | 31514654 | T | A |
| Osa04LNT0281300.1 | 4 | 31515257 | T | C |
| Osa04LNT0281300.1 | 4 | 31515300 | A | C |
| Osa04LNT0281300.1 | 4 | 31515361 | T | G |
| Osa04LNT0281300.1 | 4 | 31515422 | C | T |
| Osa04LNT0281300.1 | 4 | 31512216 | G | T |
| Osa04LNT0281300.1 | 4 | 31506495 | T | A |
| Osa04LNT0281300.1 | 4 | 31511892 | G | A |
| Osa04LNT0281300.1 | 4 | 31512173 | T | G |
| Osa04LNT0281300.1 | 4 | 31514802 | G | A |
| Osa04LNT0281300.1 | 4 | 31503484 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0281300.1 | osa-miR5827 | Cleavage | 4.5 | 15.425 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR6253 | Cleavage | 4.5 | 12.028 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR395b | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395d | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395e | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395g | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395h | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395i | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395j | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395k | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395l | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395s | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395c | Cleavage | 4.0 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395u | Cleavage | 5.0 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR171f-5p | Cleavage | 5.0 | 15.023 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR172d-5p | Cleavage | 4.5 | 17.416 | 1 | 20 |
| Osa04LNT0281300.1 | osa-miR395m | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395n | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395o | Cleavage | 4.0 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395p | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395q | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395w | Cleavage | 4.0 | 17.249 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR395r | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR814a | Cleavage | 5.0 | 17.773 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR814b | Cleavage | 5.0 | 17.773 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR814c | Cleavage | 5.0 | 17.773 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR1424 | Cleavage | 5.0 | 16.688 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR1850.1 | Cleavage | 3.5 | 6.951 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR1862e | Cleavage | 4.5 | 13.625 | 1 | 24 |
| Osa04LNT0281300.1 | osa-miR395x | Cleavage | 5.0 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR395y | Cleavage | 4.5 | 17.249 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR3981-3p | Translation | 5.0 | 22.096 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR3981-3p | Translation | 5.0 | 17.956 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR5083 | Cleavage | 4.0 | 14.688 | 1 | 20 |
| Osa04LNT0281300.1 | osa-miR5160 | Cleavage | 4.0 | 16.149 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR5160 | Cleavage | 5.0 | 11.881 | 1 | 22 |
| Osa04LNT0281300.1 | osa-miR5522 | Cleavage | 4.0 | 8.026 | 1 | 21 |
| Osa04LNT0281300.1 | osa-miR5521 | Cleavage | 4.5 | 13.487 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0281300.1 | 4 | Gm7 | Resistance or Tolerance | Insect resistance | nan | nan |
| Osa04LNT0281300.1 | 4 | OsAOX1a | Resistance or Tolerance | Cold tolerance | R2737 | R740 |
| Osa04LNT0281300.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0281300.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0281300.1 | 4 | qSN-4b | Resistance or Tolerance | Drought tolerance | RM255 | RM349 |
| Osa04LNT0281300.1 | 4 | Xa2 | Resistance or Tolerance | Bacterial blight resistance | RM317 | RM349 |
| Osa04LNT0281300.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Osa04LNT0281300.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0281300.1 | 4 | nan | Morphological trait | Root | RM3276 | RM3335 |
| Osa04LNT0281300.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)