© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0283100.1
GCACAAAACACAACACAAACTTTTCTTTCAATTGAAAGCTATTACTTATCCATTTACACAAGTTCAAACTCAAATCACCCTCCTTCATACTGGGTGACTAACAAGTTCATGCTATACTAAGAAACACGCCTTAGGTATATGCGATAAATACAACAGAACAAACAAGAGATTTTGTTTGTTGATGTGCTTTTAACCACCCAAAAGTGGTTAGTTTCTGATCATTGCCTTCTCAGTAAGAAAGCTCTCCATCTTTAGCAATGCCTCAATAGCAATGGCACTTGGTGTAAGTGTCGTCACATTACTATGTCCTTGTTTCACTGCAATATGTTCGAGTGAAACCCTGGCATCAGCATTAGCATATGAGTCCATTCTTTGTTCAAAAAGTGCAGTCAGTTTTGCATAAGCCTTTGCATAAGGATCACCAGATTCTTGATGCAAGAGGGGCCGAGAAGCAGTTCCTACTGCAGCAATTCGTCTTGCAAGTGCATCCAATGGAACATCTAACCAGATTGTTGACCCTTTCTTCATGTAACTCCAATTGATTGGTCGGATCACCGCACCACCTCCGGTTGCAACAACTAATCGATGCATTGACGACAAATCCCTTAGTACCTCACTCTCATTATCTCTGAAGAATGCTTCACTATGGAGCTGAAAGATTTCAGCAACAGATGATATGCCAACTGCCTTCTCAACCAACTTATCGCTGTCAAAGAAAGAATAGCCTAATACTTCAGCTAATATCTTCCCAACTGTAGTTTTGCCAGAACCCATCATTCCAACTAAGTAAATACACCGGTCATTCAAATAAGGGACCACGTCCTCTGCTTTTTGCTTTAGAACAAGAGCTTCATCAGCAGAGTAATAGGTTTTGTCAATACCTGCCGGTTTCCTGGAACACGAAACCTTCAGTTTGGCACCGCAGCTCCGGCGATCAGAGCCCAAAACCAACGGCTGAGCGAACTTCTCCACCGCGAACCTCACCGGAACCCTCGCCGTGGAAGAGCGGCGTGGGTTTCCGAGTCCGGCCCAGGCGCCGGGCTTCGCCCGGAGACCCACACCGGCGTCCATCTCCTCTCCAAATCGATCAGACCCGACAACGACAGGGTCTTAATTATTCCTGATTGTTGGAGACGGGATTGGATTTGCCGGCCATCGCCGGATCAATGGAGAACTCGGCGGCGGCGGCGCCGCCGCGGAGGAAGAGGAGGAGGATTCTGTGTGCAGGGACGAGCGGAGGGAGAGGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0283100.1 | 4 | 32584786 | C | G |
| Osa04LNT0283100.1 | 4 | 32583094 | A | G |
| Osa04LNT0283100.1 | 4 | 32583549 | C | T |
| Osa04LNT0283100.1 | 4 | 32583821 | A | G |
| Osa04LNT0283100.1 | 4 | 32583877 | A | G |
| Osa04LNT0283100.1 | 4 | 32584999 | A | G |
| Osa04LNT0283100.1 | 4 | 32585161 | A | G |
| Osa04LNT0283100.1 | 4 | 32585208 | T | A |
| Osa04LNT0283100.1 | 4 | 32585633 | G | C |
| Osa04LNT0283100.1 | 4 | 32585638 | A | G |
| Osa04LNT0283100.1 | 4 | 32584048 | A | C |
| Osa04LNT0283100.1 | 4 | 32585024 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0283100.1 | osa-miR5540 | Cleavage | 4.5 | 21.393 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR531c | Cleavage | 3.5 | 17.197 | 1 | 24 |
| Osa04LNT0283100.1 | osa-miR164a | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR164b | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR164c | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR164d | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR164e | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR164f | Cleavage | 5.0 | 20.098 | 1 | 21 |
| Osa04LNT0283100.1 | osa-miR531a | Cleavage | 3.5 | 17.197 | 1 | 24 |
| Osa04LNT0283100.1 | osa-miR531b | Cleavage | 3.5 | 17.197 | 1 | 20 |
| Osa04LNT0283100.1 | osa-miR827 | Translation | 4.5 | 21.432 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0283100.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0283100.1 | 4 | nan | Physiological trait | Eating quality | RZ590 | RG214 |
| Osa04LNT0283100.1 | 4 | nan | Physiological trait | Eating quality | RZ590 | RG214 |
| Osa04LNT0283100.1 | 4 | nan | Morphological trait | Root | RG214 | C1016 |
| Osa04LNT0283100.1 | 4 | OsAOX1a | Resistance or Tolerance | Cold tolerance | R2737 | R740 |
| Osa04LNT0283100.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0283100.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0283100.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0283100.1 | 4 | qSN-4b | Resistance or Tolerance | Drought tolerance | RM255 | RM349 |
| Osa04LNT0283100.1 | 4 | Xa2 | Resistance or Tolerance | Bacterial blight resistance | RM317 | RM349 |
| Osa04LNT0283100.1 | 4 | nan | Morphological trait | Root | RM3276 | RM3335 |
| Osa04LNT0283100.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0283100.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | np4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | np4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | QGn4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0283100.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0283100.1 | 4 | QGwp4 | Physiological trait | Source activity | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | nan | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0283100.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)