© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0284500.1
CCGAGCCTGCAGAAACATGTTCAGCGTAGTAGGTACAGCGGATTTACCGTCTCAGCCATGCCAAATACGGATACAGTACAAATAGAAATAGACTAGTATCGACGACACTGTTTCGTTTCATGTTCATGAAAAAGAAGGCATTACAGCTGCAACAACCCCAGTTCATTTACCAAGGTGTATTCTTCAAATTTCGCAGTCGTATAATACCTTCTGGCTGAATTAAGTCAGCGTCGTGCAGGTACTTCTTGTAAAGTGTCCGGGAGATGTTCAGAGCGTCTCCCGTAGCTGTGGTTGGAAAGACCTTCCAATCGCTCTGCCAGTTGTTTGTGAGGCTAATCCATTCCCTCCTCCATTCCTCCAGAGCAAAAGGTTCTTTTTTCTCCATGCTCAATATTAAGTACTTGAAGTAGATGGCAGCCCTTGGTCCATAGTAGTCTCGCAGCAGGCCGCTCCAGTATTTATTTGCATAATCACGAAGCAGGCTAGCTTTCGTTTTGGTGTTGTCAAACCACATCGTAATTTGTGTTCGAGCATTCCACTCATACTGCATTTCTTGCTCTTTATCTCTGGCAAGACCCTTGGCACTTTCCAACCAAGGGCCAAGAAGAAATCCCTCATGGGAGGCCAACAGTGTGTCTAGGTCATTAACAAGGTCAATGAAGTGCTGACAGAGATTGCTCACTTGGTTCACGTTGTTTGATTTGTAGCTTTCAATGATCTTTACAAAGACCTGGTTGGCATATTTAGCCAGAGTTTGACGAGTTAAATCCACAAGGTCATACCTGAAGGTATTGCTGTCAGATACTTCATCTCCATATCGAAGAAAAAGCTCTAGGGCACGTATAACAGCATCGGTGTCATACCATAGATGTGGATGTTCATATTCATCATTGGATGCATCCACTGCAATGTAATTCTTAGATAACTTTGTCGAATACGTTTTGCTACTACTTGTATACAATCCTGGTGTTTGAATAACAAAAGGTTCAACATCTGGGAATGCCACTATCACATCCCTATTTTTGTCATTTTTACCATCTGTGCAATTATAAAGAGTTTGGTATAAAATTTTCCAAGCATCTTGCAGCCCCACCATTGACTTCCCATATCTTCTTGTTGGATATGTCTCAACCCACACCTGTAGATCCACTTGTCTGTGATGAAAGGCCATTTCCGACATCAGGTCATAAACAATAGGATTTTGCTCAATACCTTCCATAGACATGCCAACTCCAACCATTGTAGAGTTCGCACTTAGTCGAGCATCAATCGGCCCAGAAGCAACCATATCCAAAACACCGTACATTTCAAAGTCCGCAGCAAAATTATGAAGCATGCACCAGATGTAAGGGACACCATAAAACTGATCAGAGTTGATCCATATTGGTTTCACTTCTGCATATAGATCAAGAACAATCATTCGGCCAACTGGAACAGAATGCAGCAGTGCCTTCATTTGTGGGGGTTCCCAGAAAGGATCATAAGAAAACAACCAACCTTGCATTAACCAAATAGCATCATCATCACCGCTTTGCATTCCCCGGAATGTTGCAGCACCCAACGAAGAGATATAATTTGGATCGCTTAGCGGAGGGGTGTTCTCATCAAAAGTATCACAGCTGTACACATGACTTGTCCCACCATATTCTCTGATTTGTTCTTCAATAAAAAGCTTCCCAATTTCTACAAATAAGGGATCAGATGCATCCAGAAGATATGTGCAACACCACCTGGGGTTGCTGTCAACTGTGAACCAGTTCCCAAGGTGAGTAACTTTAGCTGAAGGAAATTTTGATCTTAGTGCGGCCGGGATGTTACCAGAAAAGGCTGGAAGAACTGGGAACATGCCAAAAGCATACATCCTAGAAAGGATTTTCTTCTGAAGAGCTAGCTGATCATCAAGCCAGCTTTGAGGAAGAGGTCCGCCCCATCCATGCATATTGGCCATCCGAGACCATGCAAGAAATGCTGGCCCGCCAAAGAAATCATCCAGGTCTGATTTACTAATGTTGTACCTCTGAAAAACTTTCTGCCATATAGCTTCTTGACCAGTGAAAGCAAGAGGCAAATTGATACCTTGAAGAGCCATCCAGTCAATTTCCTTCTCCCAGCGCTCCCAATCCCACCAAGCAAAAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0284500.1 | 4 | 33172845 | T | C |
| Osa04LNT0284500.1 | 4 | 33175564 | G | A |
| Osa04LNT0284500.1 | 4 | 33176492 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0284500.1 | osa-miR5525 | Translation | 4.0 | 17.792 | 1 | 22 |
| Osa04LNT0284500.1 | osa-miR5532 | Translation | 5.0 | 6.894 | 1 | 22 |
| Osa04LNT0284500.1 | osa-miR166l-5p | Cleavage | 5.0 | 16.82 | 1 | 21 |
| Osa04LNT0284500.1 | osa-miR395v | Cleavage | 4.0 | 15.542 | 1 | 21 |
| Osa04LNT0284500.1 | osa-miR810b.1 | Cleavage | 5.0 | 15.643 | 1 | 21 |
| Osa04LNT0284500.1 | osa-miR1441 | Cleavage | 3.0 | 12.97 | 1 | 21 |
| Osa04LNT0284500.1 | osa-miR1862e | Cleavage | 4.5 | 16.141 | 1 | 24 |
| Osa04LNT0284500.1 | osa-miR2099-5p | Cleavage | 3.5 | 19.03 | 1 | 22 |
| Osa04LNT0284500.1 | osa-miR2099-5p | Translation | 5.0 | 13.673 | 1 | 22 |
| Osa04LNT0284500.1 | osa-miR2118a | Translation | 5.0 | 18.529 | 1 | 22 |
| Osa04LNT0284500.1 | osa-miR2878-3p | Cleavage | 3.0 | 12.192 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0284500.1 | 4 | nan | Morphological trait | Panicle/flower | RM303 | RM348 |
| Osa04LNT0284500.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | np4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | nan | Morphological trait | Root | RM3276 | RM3335 |
| Osa04LNT0284500.1 | 4 | np4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | QGn4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | nan | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Osa04LNT0284500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0284500.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0284500.1 | 4 | QGwp4 | Physiological trait | Source activity | RG143 | RG214 |
| Osa04LNT0284500.1 | 4 | nan | Morphological trait | Root | RG214 | C1016 |
| Osa04LNT0284500.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0284500.1 | 4 | OsAOX1a | Resistance or Tolerance | Cold tolerance | R2737 | R740 |
| Osa04LNT0284500.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)