© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0285500.1
GCCAGCACACCTAGAGCAAAATTTTACTAACATCAGATGCAAGAAAGTCTACATGAGTTCTAAAAAGGAAACTGGGGAAAACTAATTTACACCAATTATCACTAATAGTACACTAAATATAAACGACCAAGAAGGGCTCTAGGAACCCATTTTGTATCTAGCACCCGAACGTTGAACCTTTCTCCCGATAAAAGAGGGATCAGGCGTGCAACAGACTGGCTCTCACGCCAGGGAAACCACAGGTACAAAAGAGGCAGCGAAAGAAGAAACAAAACTTTTCCTCCGGGGCGAACATATACAACTTGAGAGGAAAAATACACAATGGCCGAGAGACAAATCACAGTACTGTATTGATGTGCAGTGCTTTCAACAACGAGGTGGCCATTTGTTTCACCAATACCTGTTGACCGCCACGTTGCCCATCCCTTCGTTCTTCGATCAGGTTTTGTAGCTTTTGAGGAAGATCATTCTCAACTATGAGCTGCTTTGGTCGAGGATGATGCTCATAGACAACCTTTATTAATTTTAGCAGTGTCAAACGGGCAATAGCTTCTCGGTGGTCAAGCCTTGCAATAAGCAGTGTCGTTAAACCATTGGTAGCCATTGCTGTATTTATCCGAGAAGATTTCGTGATTATCTTCAAAAAAGCATCCAATATATGAACAAAATATTGTTCAGGGCAGTCTTGAAAAAACTTCACTAATTTCTGAATGGCATCTTTCTTCAACAAGGCTTGTTCCACTTTTCTGTGATCATTGTCATGGGACAAGCAAACAGCAATTGAATCTAACGCAGTACACGCCCATGCATCATCCTCCAATAAGTTCAAGTACACATCCAATCCTCCATGAGCCCTCAACTGCTCTCTAGAGTTGCGAGAAGCGTGAGCCATATCACACAGCAGAGGTAAAGCATATTGCCTGAGAGGTGAGTCTGACATGACAAAATTCATTAAGTGAGGGATGATCCCATTTTCAGCTGCTTGTTCCTGTCTTCTTTTATTGATCTTGCAAAGATTGAACAGAGCATTGAGGACCTCACTATGTATTTGATAAACTAGAGGGCCATCATGAAGTTCAAGAATCGGTATCAGATGCTTGATTGCATCTGTGCGCTGGAGTGTCTCGAGACAATTAGGATCACCCGACAAATGATTAATGCACCTAAGAATCTTAAGAAGAATAGGCGGTTCTATCTTGTTAAACATCTGGAAAAGCCGTGCAAGAAGGCTTTGGCTAGACATGAGAGATTTTACGACAGTGTCTGCTTGTGCAAACTCCAAAAGAAGATCAGCAACTTTCTCAAGGTACTCACGTGCCACGTCAGCACTCATAGATACCATCTGAGCTAATAGGCCAGATGATGTTGTACTTCCCGGTCTTGCATTTAACACCCCTGATCCAGATAACACACCAGATGCTGTCTGTGATGCAGCTCCAGATGTTGATGCTCCCTCATTAGAAGTTGTTGGACCTGATGATGGTGCATATTTCATGCTTGGAACCCTATTTGAAGTTTTTATGTTGGAATCAAGGTTACCATTTTCTCTTCCCTGTCTAGAGACCTCAGCAAATTCTGCCATTAACAAGTCAAGTTCGCCGTTAGTTTTCCTCTCTGTTGAAGCATGCAGTAATGGCAAAATACTTTCATGCCTTTCTAGACCAGATAAGTGGCGAACATAATCAAGTTGTCCAGATACATGCCGAGAGGGTGGTTCTTTCTCCAACAGGCTCAGTAGGGGACGAATTTGATCATTTTGACCACTACTATGCCCATTTGATACTAGCTCTATATGCTTTGGTGATCTATCTGTTGATGTCCTTCCTGCAGAAACACTAAGCCGTTGTGGCCTAATGGGATCATTATCATTTCTCTCCATGTGACCAGCAGCCGCCATATCGGTGAATCTAGGCGATGCTGAAGGATCCATTATGATATGATGCCTATCTGCATCTGCTTGTAAAGATTGCAGTGAACCAGATGAATGGTGATGATCCAGCCTCGTTTTGGAAATTTCTAGCATTGGCGGATCTAATTGACCAGACCTTCGCCTGGGGGTGGAGCCATTCTGTGTTACTGAAGCACCAGACCCGGAGATGGAAGCAAACCTTGTTGCTTCATTCAAGCTATGAAGAGTATTGACCAGCCTAAGAAGTATCCCGTTTTTTGCCGCTATGCGACAGAAGTCATTTCTTGGAGTCGAATGCTGGAGTTTGAAGACCTGCCATATGCCATCGATTGCAAGATGAACCATTTCCCTGTATTTTGCATAATCAGGCTCCAGAAAACTCACCAATACAGGGATCCCTTGGCATGCAATGAACATTTGCAATGTCAAGGTGCTGGCTTGACAAAGCTGCTGAAGGAACCTAGATGCTTGCACCCGAACTTCCTTTGCACGATCTGGCACGGCAAAATTCATAACCACCGGAATAAGGCCAACAAGGCAAGCATTTTCTAGGAAGGTCGTATTATCTTTTACTATTTGGTTGATGAGTTGCAGAACAGAAGTAATAATACGGTTTTTGGGAAGTTCAAGAAGCTCCATCAGCGGAAGGAAACCATTTTGTGACACATAAATCTGTTTTTGCTCAGGCCGTTGATTGAAGATTGACACAAGCTTTTGGCAAGCTGATAATATCACGTCCTCACTTTCCCCAGGTTTCAGCTGTGCTACTATTTTGCTGTATTCCACAGACTGCAAAGGAAAAAGACTCTCTCCAGGAATAGTCTCATCAAATGCCGTTCCATCAATATCTTCTTCCCTCAAACGCATGACATATTCAAGAAGTTTTCCACCATTCATGTGCTCAGTATCATTTTCCTTCTGCTTCTGAGCCATCCTAGTCTTGAGTTCCTTCGCGAGATCATTTTGTGCACCATTGTATTGAAGCTCTTCACCAGTAGTGGATGTTGAAGCTTCAGCCCCATGATCTCCTCGCTTCTTAGGTGGGAATAAATCATCAAAGGAGGCATCTCCAGGTGTGTCACTGAATCTACTTAGCTCGTTAGCCATCTCAACTGAAGTTTTAGCTTCCTTTTGGAAGTTGATATTTTGTCCTCCAGCCTGGAAGCTGAAAGCATCACCATCCTCAAGACTTGAACCATCTTTACTTTCATCTTCTACATATTTACCATCACTCTTTCTTGATTCTTGGCCGCTGCTAGTTAACTTGTTTGGTGGACCATCTTGTGATACCTCATGAGTTAGTTTACCATTTAAATCAGTTGCGCCTAGTGAAGATTCCAATGATAGCTTCTCATGGAAAACTAATGTAGGATCTTTATTAAGAACCACGTTATCTTTCATAAGTTCCACATCATTCGAACTACTACTCCCAGTAGTTTTTAACATTCCATCATGAAACTCATCAGGTATATCTTGCCTGGCAGATTCAGAAACCAAATCTTTTCTTCCATCCTCCTGTTCAAGGCCAGAAGCAGTAGGTGTTTGTGTATCTCGTGGTGGGCCAGAAAATCCAGAGTGATTGTCACCACTTGATCCTTCATCGTCCTCATCAATATCCCTTGGTGATTGAACAGGTTGTCGAAGAGATGGCAAAGCTCGCCTTGAGTTTTGCAACCATGGGTGCATCAATAATGTCTTTGCATCAGGTCTTTGTATTGAATCCTTTTGAAAACATTGTCGAAGAAAATCAGTAATCTCAGGAGATAAGCCTTCTGGTATTGGTGGATGCACATCCTGAACAATGCGAAACAGCGCAGGCATGGGCTGAAGGTCATAATATGGTGGGGCACAGGTGAGTAGCTCAATAACAGTACAACCAACACTCCAGATATCTGATGCAGCACAAACACCTGACATTTCGATGACCTCAGGGGCCATCCAGTATGGAGTTCCAACCACTGAATGTGTGTTGATATCAGCTTCAGTTAATTTAGTAGCAACTCCAAAATCAGCAAGTTTGACAAGGCCCTCTTTGGTAGTCAATATATTTGCGCCCTTGATATCTCTATGTATGACACCTTGCTCGTGAAGATAAACAAGTCCTTCCAGCACCTGAGCAATGTAGACGGCCACCAATGATTCAGGGAATGGCCCAAATTTGTTTGGCTTGATAATATTGGCAAGTGATCCATTCTCCACATACTCTAGAATGATATGGAGGTGACTCCTTGTCTTCAATGATCCAAGATACTTCACAATATTTTTGTGATTCAGATTTTTCAAGAGATCAATTTCTTGCATGATGATGTTGAGATCCTCCTGCGGGATGTTCTCCAACGATACTTGCTTGATGGCCACGAAGTCTCCATTTTCCAGGTCAAGCCCCTTGTACACTCGCCCATATGCTCCCTTCCCTATTTCATCTCCGAGCATATATTTGTTGTCGAGCGTCTTGTTCTTGTGGAACTGCGCATTGTGCTGCCGCGACGCCATCTCGCCCCGCCCCCCACACACACCCACCCCGAGATCGGGCCCCGGACGCCGCCGTCCGCGGCGGGGGCGGGCGGATCGGGGGTCACTGGCGGCACGGGAACGGCTCCGGCGAGCCCGCCGCGAGGGCCATTTAGGTTTTAGGGTTTGGGTGGGAAGGGAATTGGAGGTCGAGGCGGAAGCAGGAGGAAGAAGAAGAAGACGGAGGCGATGGAAGAGAGAGAGAAGGGGAGGAGAGATGGGGGGCTTTTCCGTAATTATTTTGTTTTCGGGGGGCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0285500.1 | 4 | 33712207 | G | A |
| Osa04LNT0285500.1 | 4 | 33709422 | A | T |
| Osa04LNT0285500.1 | 4 | 33710394 | G | A |
| Osa04LNT0285500.1 | 4 | 33713213 | A | G |
| Osa04LNT0285500.1 | 4 | 33716301 | C | T |
| Osa04LNT0285500.1 | 4 | 33718036 | A | G |
| Osa04LNT0285500.1 | 4 | 33719042 | A | G |
| Osa04LNT0285500.1 | 4 | 33719134 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0285500.1 | osa-miR5819 | Cleavage | 4.0 | 18.491 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR166b-5p | Cleavage | 5.0 | 15.698 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR395u | Cleavage | 4.5 | 8.072 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR160e-3p | Cleavage | 5.0 | 15.29 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR166k-5p | Cleavage | 4.5 | 15.698 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR172d-5p | Translation | 5.0 | 18.746 | 1 | 20 |
| Osa04LNT0285500.1 | osa-miR1857-5p | Cleavage | 3.5 | 14.926 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR1857-5p | Cleavage | 4.5 | 7.896 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR1873 | Cleavage | 5.0 | 13.537 | 1 | 24 |
| Osa04LNT0285500.1 | osa-miR2092-5p | Translation | 5.0 | 15.553 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR2093-3p | Translation | 5.0 | 18.208 | 1 | 20 |
| Osa04LNT0285500.1 | osa-miR2864.2 | Cleavage | 2.5 | 20.216 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR2863b | Cleavage | 4.0 | 11.866 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR3980a-5p | Cleavage | 3.5 | 14.052 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR3980b-5p | Cleavage | 3.5 | 14.052 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR5147 | Cleavage | 5.0 | 13.638 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR5147 | Translation | 4.5 | 15.643 | 1 | 21 |
| Osa04LNT0285500.1 | osa-miR5499 | Cleavage | 5.0 | 18.474 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0285500.1 | 4 | np4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | np4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | nan | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Osa04LNT0285500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0285500.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0285500.1 | 4 | QGn4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | QGwp4 | Physiological trait | Source activity | RG143 | RG214 |
| Osa04LNT0285500.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0285500.1 | 4 | nan | Morphological trait | Root | RG214 | C1016 |
| Osa04LNT0285500.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)