© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0285600.1
AGAATAATACGAACAATCTGCGTTTCAAGAAAAAAACATAACAGTAATCTTCAAAACTACAAAAATAATCGCAAGCCAGTACACACCTACTGGGCGTTGGCGTTGCCAATTTTCCACAATCAAGATGGAATACATGAAATCGAAAGGTGGTACATGTCATATTTGCGTGGGTCGCTAGGCCTACAAAATAATTAAGTACATTGCTCTCTGCTAGGCTGCTAGCACAGAAGATTTAATATCCTCTGTATGGGCAAACCTCCAGCTTATCTACACTGGTGATCCGCGGGCATCTTGCTACCGTGGGAATGCGTTGTTCAATGAATCAGTAGAAGATGCAGCGATATGCCACACATCGCCTCACAAGGATGTCGAGGCATCTTGAAATCAAAAGTATCTTCTATCTTCTTTTGACTGGAGTTCTGGATCTGGAACGCTTCTTCCTGAAATGATTAGACACAGATTTAAAGACACCACCAATATAACACAAAGTAACACAGTTACTACACAAGTGGCATAGGGCAGACAGGGTTCCAGATTTATAGGAGTTCACGCATTTGCTTCAGTGTCTAGGATTGGAGGCAGGCCAGCATATCAGCTCTGTCCCAATAAAACCTGAATTGGTGGCCTCTCTGTTTTCAGTGGTTTTTTAACATTAGTAATATTACTAGGGTTGTTTGCTTTGGACGAATGGATGCTGAATTGGGCATCTGCCGATCCTAACTGCGAACTTTGATGTCTAGTTTGGTTTGACTTTGGGCAATGTAGTGGGTTGATACACCAATATTTTTATCACTCAAAGCACAAGCGTAGTACAAAATAAAGTGACAGTTGTTCCACCAAAATCATCGAATGATCCATGAAGAACCAACCTGTCCTATTCCTAAAACCAAGCAGCCCATAAGTGTTATGCATGACAAATATATTCTAGTTCTAGGAAAAATTTTGTACCAAGGGTCTTCAATTTCTCAAGCTGAGATGGAAGTCCATGCAATAACAACTTATGTAAATTTGAATTTAAAACACAAAGGTTTCATGTAAACCCAGAACACATTTTTTAATCGGGTACATGTTCTTAAGACACCTAAAGGTTGACTTCTATTTTCTCAAACTCGTTAATATATTTTTCTGCATCTAATCAAATTCCTATAATCAGCTACAGTAAGATCGACCATATTACTGAAGCTGAGAACTCCTGAAAAATTCATGTGGAAATACCACCTGGAGTAACATAATGATAAAGGAAGAACTGATTAATCTCTTACCTTTCCGCAGATGAATAAGGCGAATGCCTGCGGTGAGAATGCTTGCTATGTGGAGACCGCGAAACTCGTCTAGAGATGAAACATAACTAAATGGGTAAGTGAAAGGATAAGAGATATATGAACCTGATGTTTCTTCACTCAGAAGATACCTGCACACTCATATCAAATTCACAAGGCATAGAATAAAAGCATTCCTATACAAGACTTACCATAGCAGATATGCGAAAGCAGTGTCCTTGAGGCACTGCCTCAAAGAACATGAATCCAGACAGATAGTACAAAATAGTTCAACCAATACATCCCCTCCCCCCCACCCCAACACACACACAAAAACAAAAATCTCTTATCCTCGCATGGGGAGAAAGGATGGAAATCATAGAAAAACCATGGCATGACTAGCCGTATTCATGATTTAAAAAACATCAAATGCTAAGCAATTTGTGGCTTCCAGATAACCAGAACAGAGTAAGTATGTCAGCCACATTATTGATGCCAAACATAAAAACAACTTTTAGGATTAACTAATGATGCCAGCCATAAAACAATACCATCTACAAACATGTTGAAGCTAACTGCTAATTCGCACATTTTTAACAGCATTAATCTACATTATAAATATGCTGTAAACATATAGTTACCTGTTCCTAGATTTTGGGGGTGAGGGGGACATGCTGCTTTTACATGAATGAAGTTTTCTCCTTTTCGAATTATCAGAAGGCTCATCACTTGAGACACTCTCTCGATGTGAAGAACTCTCCTTCTTGGTCCGACTTCTCGCACTTGGTGATCTTGACCTTCTACTGCTATGACTACTTGAGCCCTTTGTAGTTTGCCTCGACCTATCCTCCTTTTCATGTTTCCCTTTCTCTCTTCTATCTGCAGAATCCCTGCTTTTCTCTCTTACGTCCTTTTGATAATCTTTTCTCTCTCCTTTTGCATCATCCTGCTTAGAGTTTCCTCTGGAACGGGGTTCCCTTGTATCAGCTCCATGTCTCACACTCCTGTCAGATCCTTTTTCCTCCTTGAAGCTACCCTTTTTATCAATATTTCCATACATGCTAGATTTATCATCATCATTATATCTTTTGGAAGAAGATTCGGATTCTTTTCTTCGAACAGCCTTTGGCTCCTTTACAAAATCTTCCTCATTGCTGCTCTTCCCTAAATGCCCTTGACTGCTCTCCATATTGCTAAAATTTTCAACATTATTGCCTGAAGGTGGAACTTTTCCATTTTGGGAATATCCATGTGCCTTCTCATCCAGGGTAGGAGCCACATCCTTCGGCTGACTTGATATTTTGGCATCTGAAGGAAATTCCCTACTATGTGTGTCATGAACACGTAGCTCTTGTTTAAGTTCTGCACTTGAGTTCCTATGAGACATTTCATCATTAAATTTACGATCTTCGCCTAATGAAGCATTTTGGACCACAGAATTTCTTTCATTATGATTTCCATGCTGTTCACCATCAGTGGCTTTTTCACCTTCTCCTGGACGAGCTGCGCCAGCTTTAGTTTCAGACGATAAGTTTGAAACTGGAACCTTATCCTCATTATCACCCTCATCGTCCTCATCATCTGAATCATAACTAGCAAGGCCAAGAAGAGCGCCTTTAGGGGAACTTAACCCAGTACCATCAGAATGATCAGCTGAGCTAACATTAGTTGGCTTAGCAGGGACAACAACTTTAGCTGAGACCTTTGGTTTTGATTCTCCCAGACCAGGCCCCTTCACACTAGAAACTCTAGTGGGCTCATTTGGTTCAGCTGATGGATCATCTTCATTCAATACTTTTGTCGCGATCTCATCAAAAAGATCATCAGTAACCTTTAAGAGAACTTCAGTTAATACACGCTTAATTTCCTGGTTCATTGCTGCCATCCGGGCTGCTTCAATTTCGTCCTCATCTTCTTCATCATCATCAGTAGATTTAGCTGAATCTACGCTTCTGCTGTCAGCCTGATCAGAACTTTTAAGTGTTTTTTCAGCATCTTCAGATCCCTTGGAGTGGAACTCTGTTGAGTGTTGCACCGAAGCACTCACTGATGTAGATTTCTTCTTCAAAAGTTCTTCGCGAAGCCAGTTAGGCACTGGAGGTTTCTTTGATCTTTCTGTGACATTAAAAGGAGTGTTTGCATCCACAGGGAATGCTTCTGTCACATTACCAACTCCAAATGCTGCAGGTGGAATATAGCTTGAACCAGAAACTGCTCCAAAGAGTGGTGCAGCATGAACTGAAGGGTCCATCTGTGCTGCTTGTGGTGGTACTGAAGCTTGAGGAAAAAGTACTGTAGTAGATGGAATCCATGATTGCGCTGGTGCTGAATGTGCATCATGATCAGATGCTGCTATTGGAGCTGCTGGAATATTAGAATTGAAATTTGCTGTTCTGTGCACTGCCATATCAGGAGCTTTCCTACTATTAAATTCTAAAGGTTGATCACTGGGATCAACTGCAATCTTGGAAGACTGCCCATCATGCCCAAAATGAGGTTGTTCCAGTGAGGGAGCAATATGCATACTGGAAGGCGCTTGTGGAAATCCGTCTTGCATTGCTGAGGCAGTTGGAGGTAGCTGAGTCTGCGAGCTTGGATATTGAATCATAGCATTCCCAACACCTGGAGTAGAAGGATAATTATAAGATACCTCCTGCTCATAGGCGGATGGAAATGAACCAAAGTTCTTTGCTGGTGGCGCCAATGGACCTCCATCTGGCAGATAGTTTGTTTCCCTGTGCTGTCCTGTCATTTGAAATGGCAACTGGTCATTACTTGACTGAGGGATTGGCGGGCGTAAAGGTTCTGCGGGCAGACCAGCTGGTTGCTGATACTGATCCTGGTAACCGTAATTATGAACTTCTGGCCTATTTGCGGATATGGCATGCTGTTGAATATGATGGTTTTCTGTAACAGATTTAGCAGCAGCCCATGCCTTCGCCTTTGTAGCCCAATCTTCCTCATTTCCATGCCCTGCGTATCCATGACTTTGAGCCCACGAATGATTGGCCCAGCCCTGGCCCGGAGGCGGCGGCGGGTAGCTGGGCGGCGGTGGCTGGGCAGCGGCGTGGTGAGGAGGCCAGGGATTCCCCGCCGCAGGAGGCGGCGGCTGCATCGGCATCGGAGGGAGGGAGGGATGGTACCCATACGGCGGCGGCTGCTGCGGCAGCGGCGGCGGAGGGTGGGGTGGTCCCCACTGGTGGTGCTGGGGAGGGAAAGGGTGGTTGGCGTGGGGAGGGTACGGCGGTGGGGACGGCCCGGGGTACCAGTGCGGGCTCGCGTGGGAGGGAGGTGGAGGCTGCGGCTGCGGCGGCGGCGGCGGCGGGGGGGCGTCGCCGGAGACGGCGAAGCGGCGGTGGTGGGGGTAGGCGTCCATGGAGGCGGAGGGACGGGAGGGGAGGCGGAGGAGAGTCAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0285600.1 | 4 | 33767876 | C | A |
| Osa04LNT0285600.1 | 4 | 33769445 | A | C |
| Osa04LNT0285600.1 | 4 | 33771922 | C | T |
| Osa04LNT0285600.1 | 4 | 33767129 | T | C |
| Osa04LNT0285600.1 | 4 | 33767872 | G | A |
| Osa04LNT0285600.1 | 4 | 33770900 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0285600.1 | osa-miR812q | Translation | 4.0 | 16.459 | 1 | 24 |
| Osa04LNT0285600.1 | osa-miR812v | Translation | 5.0 | 19.14 | 1 | 24 |
| Osa04LNT0285600.1 | osa-miR5822 | Translation | 5.0 | 19.746 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR166a-5p | Translation | 5.0 | 23.811 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR166e-5p | Translation | 5.0 | 23.811 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR395c | Translation | 5.0 | 9.676 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR162b | Cleavage | 5.0 | 21.609 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR418 | Cleavage | 4.0 | 10.808 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR435 | Translation | 5.0 | 18.367 | 1 | 20 |
| Osa04LNT0285600.1 | osa-miR444a-3p.2 | Cleavage | 4.0 | 23.581 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR395o | Translation | 4.5 | 9.676 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR444d.2 | Cleavage | 4.0 | 23.581 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR444e | Cleavage | 4.0 | 23.581 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR444f | Cleavage | 4.5 | 23.581 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR1850.1 | Cleavage | 3.5 | 16.191 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR1850.1 | Translation | 4.0 | 11.598 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR1859 | Translation | 4.0 | 24.443 | 1 | 22 |
| Osa04LNT0285600.1 | osa-miR2870 | Cleavage | 5.0 | 16.486 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR2870 | Cleavage | 4.5 | 6.817 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR2878-3p | Cleavage | 4.0 | 14.46 | 1 | 24 |
| Osa04LNT0285600.1 | osa-miR5488 | Cleavage | 3.5 | 14.088 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR5524 | Cleavage | 5.0 | 3.203 | 1 | 21 |
| Osa04LNT0285600.1 | osa-miR156k | Cleavage | 5.0 | 6.331 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0285600.1 | 4 | np4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | np4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | nan | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Osa04LNT0285600.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0285600.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0285600.1 | 4 | QGn4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | QGwp4 | Physiological trait | Source activity | RG143 | RG214 |
| Osa04LNT0285600.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0285600.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)