© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0286300.1
GGACAAAAAGGAGCTTAGTTCTAATAACTCTTCCACCATCTGATTCTCCTATGAATGTGTGCTACGGTTCCCTTTGTACAAGAGGCATCATTGCCATAATATAATCTGTTACTATACAATTGGTGTACAACATTGTTAGGTCATACCGGAAGGTTCTGTTAGCGGGTGATTGGTGAACACGTCGGCGTCGGCGAGTCGAAAATGATCATCAACATCAGTCACCTCTGCAGACGGTGCAAGGATGCAACCAGGGGCATAGAATTCTGATGGTACCTTGTTCTCAGCTAGTCAAGCGATTATCTGCTTTCTCCTTTGGTGTCCTCTCTTCCTGTATTTCCTCCAGGTCGTCGTCTTCACTACGCTTGCCAGCTTGCTCCTTCCAATAAGCAATTAACTTCTTCAACCTCATGATTTCCTTTGGGGCAACATGCTTGCTCGTATCATTGACAATGCAACGCACTCGTGAAGCATACATGAGTGAATTGTAAGTCTCCTCCAGGTTGGACTCTGCTGGTGAGACATTCACAAACATCAAGGTTTTCGCATTGCCTCCAAGAGAATCACTCATCAGCATTGTCAACTTATGGTTCCGATAAGGTATATGTTGTCCATCAGAAGATAAAGCCCCAATCACATCAGCCAATGCAGAAAGAGACTTATTGATGCTTTGAGCTTCTTTCAGTTGTTTTCCTGCTGAGCCGGACTTTTTCACCCTCTCAGAACCAGCAAGGTCCACGAAACTTAGCTTTCCTCTTGCATAAGATTGAGTCTGGAGGTTGGTACTTTCAATAATGATTGAAAGAATTAAATGAGACCTTGAGCTCTCAACATTCATATTTGTTCCAGCGGTGTGTCTTCTCTCGGAACCTCTTAAAATTATAGCCCTCAGTTCTTCAAAACTTGAAATGTTCACAACTGTCACATTTTCAACAGTAACAACCCCCTTGGAATCCTTTTTTATTTCCAATTTTTGGTGTGTTGCGTTTTTGGCCAACAACAGGTCCACAAGATTATCCTGATAAAGCTCAACCATATATGCCTTCAAAGAAAATGAATATTTGTGACCATCACGCTTTATCACCCTAAAAAGTTCAGAGGTAGCCCTTGGGGTAAGACCAGGATTGTTTTCAGATCCATAAATTGTAAAAGTTTTTCCAGAACCAGTTTGCCCATAAGCAAATATACAAACATTATATCCATCAACGGCCGATTGAACTAGATACTTCGTGTCCTCAAATACTTCTTCTTGGGTAGTGTTAGCATCAAAAACACGGTCATATATATGTTGTTTTGACTTGTCATCTTTCCATGGATGTGCAACTGTAAACTCATCAGGGCTGCAAACAATATTCTTGTCCTTTTCAATGAGCTCCTTATCATTTAGAGGACGCAGACGACAAAAAACTCTTATTTTTCCCTTCATATCTTCAATTGTGTTATAATAACGCTTTCTCAGAACCTGCTCTTGCTTATAAAGATTTTCAAGCTCAATCAATTGTGCTCCTTGCCTTTTAAGAATCTCAGCAGTCTGTTGGTTTTTTCTGTCCACATCCGCTTTGAACTCTCGTAACTCGTCAAGTTCTTTGAGACTGTTTTGCAATGTATCCACCTCAGCATTTCTTAAGGCAAGAGTCGATTCAGTAACATTCAGGGAACGTGTTCTGCTTTCCAGTTTTTGCTCCAATTCAGCAATACGAGATTTCAGCTTGCAACATTCATCCTCATAAACTCTTTCCATATTACTTTTCTCTTCACTTTTTGCTCTTTCAAGCCTTTGAACCTTCTGGTCAAGCAGATTATTTTCCATTGTTAATTTCTTTGATAATTCCTTGGATGCATCAAGCTCCTTCTTACAGGATTTTAACTCCTCCTCAAGCTTTGCTAACATCTCAATGCTATTATTGACAGTGCCTACAGTTGGGAGAGTATCTCTCTCAAAATGATTTCCTGATACTCCTGTTCTATTACTGCTTTCTTGGCCCTGACCACTTTTTAATCTGGTCTCCAGTCTAGTTTTCTCCATCAGTGAAGCCTGCAAAGAGGAGTCCTTTTCATCACAAAGGGATTTTAGTTTATCAAGATCATTTGTTACTTCTTTAATGCTTTGCCGTTCAGATTGCAAGGTATCCCTCAGACCTTCTAATTCTTTTTGCATATCTCTTTCTTGTTTTGTCTTCTTCTGTAACTCCTCATTCAACAGATCTGCTTTCCTTTCAGATTCCTCAACTGCTTTTGACAGTTCTTGGACACGTTTCTCATATATTTCAATATTCGGTGGTTTATATGTTTGAGAAACATCGTTTTGAGAAACCGCGCTAGTAGCAGAGCGTGCTTTTGAATATCTGCGGAGCATCACATCATTGATATGCGTCTGAAGTGCTACACATATTTCCTCGCCCTGCTTAGTTTCAAACTGAAAGATATGAAGAACACCAGCGACTCTCATTTTAAAGAAAACAGCGGTATTGCTGCTCCCAAATTGCATGATATCTCTCAGTTCTGCAGAATGAAGATATTCCTTGGGAACCGGACGGAAAAAATGAACCCCTCGTTTGTTTATTCCCAGAATGATTCTTCCAGGTAAAAGTCCTATTGGATCATCAATCTTCCGGACACTGAAGAAAACTGAGTTCCCATATGGAAGAGTCCTTAAGATTCTGAGAAACTGTTGCCTTGCATCATCTTTTGACAGATGTTCCATTAACTGATAGCGTGAGACAATGTCAAGCTCCCAGTCTCGCTTTGCTCTTGTAATTGCAACTTGTCTGGGTAGAAATCTCTCTAAAAGAGATATCCATTCAACACAAGACTCAGGATTGTCAACAAAGCCAATTTCGACCAATATTTGCAGAGCAGATAGCTGTGCAGCATCATCCCTACCTACTGGATAGTTTCCTAAAATATAATCATGTTGTAACTGGACATAAGATAGCTGAACAAACATTGGATCAGTTATAGCCTCATCGGACTCACGGAAGAGGCGTTTTTTAAATACAAGTTTGCAGTGTAAAATTTCTCCTTTGTTCCGATCCTTGGCTGCCTTGAATTCAGATAGGAGGTCACCAATATATTTGTTATCATCTAAACCAATGTACTCCTCATTGCCAACATCTGAAGACTTGGATCCATTAACAACCTTTCGGCATTCAAAAAGGCTGAAACTAGAATATACTGAAAGTTTGATAATGCCAGCAAGTTCCTCAACAGCATCAGCAACAGTTGTTGCCATGTCATATGTGATCTCTTCAAAAGTTTCATCCAAGAAAAAAACAATTGTTGTAAGCTTACGGCTGGATAAAAGAGCCTCTATCTCCTCCCGTGCAGGAATTGTAACCCTAGGGCCTGCCTTAACTGAGCGTTTCAGTGCATTTAGTGTGTTAAGTGCTAGAACTCGAACATCAGAATCAGTTGTAGCGCCATGAGCAATGTAGTGAACATACTCAGACAAGTATGCTCCAATATCTTTGCTTGGTGGCATGGATGACGCACATAAATACATAAGCTCCCAAGCTCTTATTAACCAAGCCCTGTCGGGATTGTTACGTGTTTGTTTTGAAATCTGTGCAAAGAGCTCATCTCTCAGTTCAGAACGTTTCAAAGTATGCTTGTAAAGCTTTGCAACAAGTTCAATTCTTTCATCCAAACTTATTATTGCTGGGGAATCGATGCCCATGTACTTCAGTATGACATGGAATAACTTAATTGAACGGCTTACAAGGTCACTACTTATTTTTAGCAATGACGTTGGAATAGGATCCTTTTGGAAGCACAACATATCTTCCAAGGTGAACTTTTCACGAACATGTGGTCCCACAGATTTCTTCGAAAAAAAACCACGTTTTCCAGCTGAATGGATCTGTTTTTGCATTGCCTTCAGAAAGCCCTCTACCTGGAACCTATCAATAAGTGGAATTGCTCCAGCAAGTTCCGGAGGTATGGACATAGACAAAGTCGTCGGGGTAGGTGGCGCGAAGCTGTAGCCGTCGCTGTCGTACCCATCGCCGCCGCTGGCGCCGCCACCGTTCATGCTGGAGGTCGCCGAGCCATGCAGCGGCGTGGCGGCAGTAGCCGCGCCGTTGCTTCCACCGACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0286300.1 | 4 | 34040570 | T | C |
| Osa04LNT0286300.1 | 4 | 34045886 | A | G |
| Osa04LNT0286300.1 | 4 | 34049229 | T | C |
| Osa04LNT0286300.1 | 4 | 34040203 | T | A |
| Osa04LNT0286300.1 | 4 | 34043572 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0286300.1 | osa-miR5532 | Cleavage | 3.5 | 18.036 | 1 | 22 |
| Osa04LNT0286300.1 | osa-miR5532 | Translation | 3.0 | 13.091 | 1 | 22 |
| Osa04LNT0286300.1 | osa-miR5830 | Translation | 4.0 | 14.882 | 1 | 24 |
| Osa04LNT0286300.1 | osa-miR164a | Cleavage | 5.0 | 14.574 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR164b | Cleavage | 5.0 | 14.574 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR393a | Cleavage | 4.5 | 15.199 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR395t | Cleavage | 4.5 | 13.921 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR396c-3p | Cleavage | 3.5 | 10.997 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR397b | Cleavage | 5.0 | 15.563 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR164d | Cleavage | 5.0 | 14.574 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR168b | Cleavage | 5.0 | 14.247 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR164f | Cleavage | 5.0 | 14.574 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR1435 | Translation | 4.0 | 11.627 | 1 | 20 |
| Osa04LNT0286300.1 | osa-miR1860-5p | Cleavage | 5.0 | 20.594 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR1860-5p | Translation | 5.0 | 12.594 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR1860-3p | Cleavage | 5.0 | 19.536 | 1 | 22 |
| Osa04LNT0286300.1 | osa-miR1882e-3p | Cleavage | 5.0 | 18.629 | 1 | 24 |
| Osa04LNT0286300.1 | osa-miR2105 | Translation | 4.0 | 18.764 | 1 | 20 |
| Osa04LNT0286300.1 | osa-miR5151 | Cleavage | 4.5 | 20.462 | 1 | 22 |
| Osa04LNT0286300.1 | osa-miR5340 | Cleavage | 5.0 | 14.213 | 1 | 23 |
| Osa04LNT0286300.1 | osa-miR5494 | Translation | 4.5 | 11.272 | 1 | 21 |
| Osa04LNT0286300.1 | osa-miR5513 | Translation | 5.0 | 12.827 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0286300.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0286300.1 | 4 | np4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | np4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | tgwt4 | Morphological trait | Seed | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0286300.1 | 4 | nan | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | nan | Physiological trait | Source activity | RG143 | RG329 |
| Osa04LNT0286300.1 | 4 | QGn4 | Morphological trait | Panicle/flower | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0286300.1 | 4 | QGwp4 | Physiological trait | Source activity | RG143 | RG214 |
| Osa04LNT0286300.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)