© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0287500.1
ACCAGCCATGACAAAGTTTACTGCCAGGGATGTGCAACGATTCACGTTCAAGTCGACAAGGTGACAGGTAACCTACAACAAACGAATCCATCCAACCGGTTTACACCACCTATAAGTTAAACGGACCGACCCATGGACCATGGTACGACGGTAAACGCTTTTTGGGCAGGACGGTGTATAACATTCACATCACATGTACAGCACTAGAGAACGGCCCAGCAAAAAGCAAAGAGCGATCAGCACAAGGGGCTGCAACATCTACCTGCCCTTCTCTCGAAGAGTTGATAGGGCGACGATGGTATCAGCTGCCCGAGCGACATTGCTGCTGCTAGCATCGTCTGGCCCAGACGATTGACTGTGCACTCCACTCTGTAAATGCTGGCCTTTTGACTCCTTAGGTATGGGTGTGGGAGCATTATACCCCTTGGTGACTGCATTAGGTGCTTGAGAGTGCTGGCTTTCTGAGACCATGCCTGCTATTGGAGATGCATCGTCCTTAGGCTCCTTACTTGATGCTGGAGGGTCATGGACATTCGGTGCAATACTCAGAGATAGAGAACCACGGGCCTCAGTGGCCAAAGCTTTAGGATTTCCATGCCCTGGTGCATGTACTGGACGTGCGGCACCTGATGTCCCATCATGGCCTTTACCTGAATTAAGAACTGGGCTTTGTTGTGATGAAATACTCAATGAAAGAAACTCCTTGTCTTTAGGTGTCACTCTTGGTGCAGAATTGAGACCTTCTGCACCTGCACATTTGGAATTTCCCAATGCCAAACTAGGAACAAAAGATTCACCGCCCTTTGGCCTGATACCGGGAGGTGTCACTCTTGGTGCAGAATTGAGACCTTCTGCACCTGCACATTTGGAATTCCCCAGTGCCAAACTAGGAGCAATAGATTCACCGCCCTTTGGCCTGATACCCGGAGGAGTCACTCTTGGTGCAGAATTGATACCTTCTGCACCTGCACATTTGGAATTTCCCAATGCCAAACTAGGAGCAATAGATTCACCGCCCTTTGGCCTGATACCCAGTGGAGTCACTCTTGGTGCAGAATTGATACCTTCTGCTCCTGCACATTTGGAATTTCCCAATGCCAAACCATGAACAAGAGATTCACCGCCCTTTGGCCTAATACCCGGAGGTGTCGCTCTTGGTGCAGAATTGAGACCTTCTACACCTGCATATTTGGAATTTCCTAATGCCAAACTAGGAACAAGAGATTCACCACCCTTTGGCCTGATACCCGGAGCAAAAATCCCACAACTTTTAGAGGCATTATTTGGTTCTGTAGAAGCACGACCTGAAGGTCCTGTGCTTGGTCTAACAGAATTGCAAACTTGCGCTGCGAGAGATGCTGATTTTCCAGATGGCATCCTTAAAAGGCCATTATGAGCTACAGGTGCCACTCTTGATACCAATGGATCTTGCCTTTTGGCACAATCAGTAGCAATGTTTCCTGATAAAACGGTTTGTATAGGAGAATCCCTCACTTTGGGTTCCACACTTGGAGAAGCCCCATGTACGGGGCCGACAGAAGTAGAAGTTTCCGGCACACCTTTTGGTGCCAGAGAATCATAGCCCTTGGAAATCATGCCTGTTGCAGGAGTATCACATCCTTTGGTGCAAAGACTGGTGCTGTTTTCAGCTACTGCATTTGGGGCATGAGAATCACCATGCGCAACACTAACAATTAATGAACAATTCCCAGTTTGATCCAAAGACCTGTCTTCTGCAGCTGTCCTCGCAGGATCAGAAGATGCTATTTTGCCAGCAGATTTATACCATAATGATGGACAGTAATGAAGCCTCTTCAAGGTTTCCAAAAGCAACTTCTCTCCAACTAATATTATCATTTGCTTTACCATCTCCTCACGAGTTATTTTGTTTTCCTTCAGCTCTTCATAATGATGGAAGAGCAATTCCCTTGCTACCGATGATATATTTTCTTGAATCATGGCAAAAAGAACTCTGAAGGATATCCAAGGGGAAGTTGGTCCCTCAGCATTTCCACTCATTATAGGTACAAGAGTAGAAATATCCACCGCAACTTCCTTTGGTGATGGGTGAAACCATAAACCCTTCAAACCAAGTAAATAATTTCGAACTTTCGAGGAAAGCCTGAAACTAACAAGATATTCTAAACGAATATGGGTGCTAAGATGAGATGGCCACATGACGTAGCACTTTGGATTTGAGCAATCATCAACACCAGAATCATATATGTCACTGCTTGGAAAAGAATCTTGTGATCCAGGCATGACAGCCTCCATGTTCCCCAAAATCAACCGGCAGAGCAACATATATTGCACTCCTTTTTCGTCAACATCACAAAGACCAACACTGGAAAATGCTCGGTCTTCTGGTGAAAGATAAACACCAGCACTCAAGCCTGCCTTCTCAGCAGGTTTTCCATTGTTACCAAAACCATTAATTAGGATCCTAACTATGTCATTCTTCCTAGATCCCAGCCATCCATACCTTACATTTGCATCACCACGTTCTTCCTTGGTGGACATCATTTGTTTTTCAAAAGCTTGAAGTCTACACTGTGCAGTGATATCATTCGGAGAGTAGCGGTGGATGTGCAGTATATTATTTGGCGTTGCAAATGGACCCATGCCAGAGAGGAAAAGGTCCTGCGCAAAAAGAAAGCCTTCACTGCCTCGTTCCACAGATGCGATCTTTTTGCGTAATATGTCTGCAGTGGCAGGCTTCTGTGGAACTGGAGGACTAGATTCAAGGACAACTTGCTTCACCACTTCTGGTGGAGAATTTGCAACCTTATCCAACATTATTCCCTGTGTGGCGCCCTCAAAATCACCGCCTACTTTAGCCACTTCATCAGCTTCCTCATCAAAGAATAGAGAAGGATAAAAGCACTTCCCAGTGTCATCAAACCATGCCACAGACCGCTGCTTTCTAGATTTTAGGTTGACCAGGGTCATCGACAAGAAATCAACAAGAACAGGCTCATCGTCCATCACAGCAACAACACTAGATTTATTGCTTCTAAATTCTTCAATGAGAGACTTCATTATCTGCTCAGGAAAATTGTGCCAAGAACCCTGTTTGTAAAACATAACACGGCTGGGCACTCCACTTTTTAGGTAATTGACACAATCACTGGCAAGGTTAGGTCGAGTGCAACAGCATTTGCAGCGCTTGGCAGATGAATCAGATGATGGTCCCTTCTCAGTTTTGATGCGACGAGACTTGCACTCTTTTGACAGGCAGTCATCAACAAGCTTGCGCTTCAAGCACAAGGAATTGGATTCTTGTGGTGATGCCATGGGATAGCTCAGTTCCTAGCAGAACAAATGGAGAAAGATAAAAGAATAAACTAAGCCTAATATGGTATACAACTTAACAGATCTCCCTACATTTTGACTTCAGTGGCGGAGCATGCCCTGTATAAGATAACAAACAGATGTCTCGAATACACAGCTATATCCAATCTGTTCGGCTACTATATCTGTGATAATTAAAAGCTTTCTAAAATAGTAAAATACATGAGAGCCCAATTCGCGTTGCAACTTGCGAGCCAAGAAATCTCTTAGGAACCAACAAAAGAAAATTCTTGACTACATCCTCCACTAGATTAATCCATTAAAACTTAAGTTTCCAAAATATAGAATACATGACCAAATGAATACTCCAGGACCACCAAATCACTTTTATATGCGCCTATAAAAAAGGTAAGCGGTTCAAACAACTGATCATCCAACAAACAAAAATGAGTATTGCAGCAGGAGGGACACGTGAGCCAAAGGAATAGACAAAAAAAAAAACATCCCATAACGACATAGTAAATTACACACACCATCTCAAAACGGCACAAATAGCAGTTCTCGCTATCCATATCGCGACAAAGTGCATTAAAAACATTAATAAGAAGCTAACGAAACCTATTCGGTGACATTAGCAGGCACCCAAACCCTAAAAATACTAGTAGTAATCTACACACGAAGCAAGCCGCTTGACATTCTGATGAAGGGAAGAATAGCACCACCTCTACCAATCCATCAAACAGCACCAACGTAAGGTATCCTTTTATATAACTAAAAAATTCAAACCCTCCACCTGCTATTATCCTGTCTACTCGACTGGAATCAGGGGATGTGATACGCGCTAATCCGCTAAAGCTAAACCCACCCCGTCGACGACATCCACCCATCCATTCCCTAGCAGTAATCAAGCAATCAGAGATACCAACCAGGCCGACGGTCTTCCGAAACACCGGCGAGGCGACGTCGAGGCCCCCCAGAGAGCGGAGACGCACGCCCCCGTCGCCTGACTGAACGGCGCGGCGCTTGTTGTCCCGATCCCGGTGAGAGACGGCGCCGGCGGCTGTGGCGGCGCGGCGAGGTAGCGAGGTAGCGACGGGGAGCCGGGGAATCGAGCGAGCGAGCAGGCGGTGGCGGTGGCGGTGGCGGTGGCGCTAGGGCTAGGGCTAGGTCGCGACGCCACACTCCACCAGCATCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0287500.1 | 4 | 34315887 | A | G |
| Osa04LNT0287500.1 | 4 | 34319394 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0287500.1 | osa-miR5541 | Cleavage | 4.5 | 21.021 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5541 | Cleavage | 5.0 | 22.233 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5790 | Translation | 4.0 | 22.493 | 1 | 24 |
| Osa04LNT0287500.1 | osa-miR5512b | Translation | 4.5 | 20.759 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5512b | Cleavage | 4.5 | 9.175 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR6254 | Translation | 3.5 | 11.008 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR6254 | Translation | 5.0 | 23.781 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR7693-3p | Cleavage | 4.0 | 14.611 | 1 | 22 |
| Osa04LNT0287500.1 | osa-miR166a-5p | Cleavage | 5.0 | 15.959 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR166e-5p | Cleavage | 5.0 | 15.959 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR160f-3p | Translation | 5.0 | 16.624 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR166l-5p | Cleavage | 4.0 | 15.959 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR172a | Translation | 5.0 | 17.733 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR172b | Translation | 4.0 | 17.733 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR172d-3p | Translation | 5.0 | 17.733 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR820a | Cleavage | 5.0 | 22.199 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR820b | Cleavage | 5.0 | 22.199 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR820c | Cleavage | 5.0 | 22.199 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR1425-3p | Translation | 5.0 | 15.91 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR1429-3p | Cleavage | 5.0 | 12.46 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR2105 | Cleavage | 5.0 | 22.508 | 1 | 20 |
| Osa04LNT0287500.1 | osa-miR395x | Translation | 4.0 | 9.901 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5494 | Cleavage | 3.5 | 9.142 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5512a | Translation | 4.5 | 20.759 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR5512a | Cleavage | 4.5 | 9.175 | 1 | 21 |
| Osa04LNT0287500.1 | osa-miR2275c | Cleavage | 2.5 | 17.912 | 1 | 23 |
| Osa04LNT0287500.1 | osa-miR5514 | Cleavage | 4.0 | 18.809 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0287500.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0287500.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0287500.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0287500.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)