© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0287900.1
GCATGGACAAAAATTCCCATTTCAAGCAAGCAACAGCATACACTACAGGCCTTGAACCCATCTGCAGGTACCCAGAAGCAACGCTCTAAGTCTTAAAGGATTTACTTAAAGGGGCAAGCATCTGAAGTCGAAAACCCACGGGCCGAGTCGCTCTTTCAAAAAACCAAAAAAAAAAACCCTTCGGGTGTTCTGCTACCAGTCTACTACTAGAAAGAGCTAAAGCTCATCAACTTCCAGCCTTGGTATGATGGTACCGCGCTAGAGCATAGTCTGAAACTCTGAATGTTGGGACTATGGAGGTGCTTCTGGTTCTAGGACCCATACAGTACAGGTAATGGAGAGAACATGATGTATTTCGATGCCGTGGAGATCATGCAACCATTCAGTTAGACCGAGATAGGAAGAATTCATAGTCTGGATGACGGTTGATAGACTTCTCCCCGTTGGCCTTGGGTATCACCATGCTTGACATAACTGATGCACCATGTCTTAAAGTCTTCAGCCTCTGTTTCAGGACTTCAGCACGATCAGTTTTGGGGCCAACGTCTAATGACATTGGCTTGATCTCTGGGTTTCTCAGTTGAAACCATTGCTCTCCCTTGTCATTGTAACTCCAGAAACCAACAACTGGACAAACCAAATGAGTAGGTTCATCAGCCTTGTCTGGAGAGTGAATTTGGGGAACTACTTTGCCCAGGGAGTGGTAAGTCAGGAATGCAGCACGGCAGTTTCCTTGAGGAATTCGGCAAATAGGATACCACGCAACACAAAACCAGGAAGCAGGATGAAGATCGCGCAATTTAAGATTTTCCAACATCTTGGGATCCCCAAATATTTGGCAAGTAGAGAGATTTTCACCACTGGTAAGCTGTTTGATCTTCTCAAAAAGTGGAGGACGTGAAGAAGGATGCTCTGATTCAAAATATTCAAACAGGGGTTCCCCATGGTCTTGTACAGATAAAGATGGTTTTGGTAAATACACACCATTTGGTTGGGATAATAAGAAATCATCATCACTGTCAAACTTATGGTCCAAGTTATTCTTGCACTGTTCAAACAATTGAATAGCAGATAGAGAAGGTAAAAAGTAAGCACAGAACTCTGAGACACCACAAGCTGATCTCGTAGAGTTGAGACTTCTATGGATTTCTACTTCCAATCCATAGGATCCAGGTTCCTCATACCATTCCCACACATTTCTCAAGGAGACATCCGATATCTGATATTGATATGGTGAGCTGCCAGCTTGCGGGTCCTGCAAACAGTTGCCATTCCTCATGCAAGATGTCTTAGCAATGACTGGACTTGCAGAATATATAAAAGTCTCAAAATCAGCAAGGGGGTGACCAGAAATCAGATGAACATCTGATGCACCTTGCACTTTGCAGGCATCATTTGCAGCCTTGATCATCTCACCTAATTGCAATTTAGAACTAACAGATCTTTGCTGGTTCGTGTTACAGCGCCCTTCAAAAGCTGATACACCATGATAGCCAACCTCCAAACCACTTTCAGTAGGCCTGGAAGTTTTCCAGTAATCTGTGGTGCATCCAGGGAACTGAGAACCTGAATCTTGGGATTGTAGATGGTGACCTTCCATGCCATGAGATCTGCTCATTACAGCATTATCTACTTTCTTCTGTTCTTCGGAATCAACAGAAGAAACATGATTCAAAACATCAAGAGAACCTGTGCCAACAACATTTTCTTCTCGAAGCAAAATCTGCAGCCCTCCTTTCTGCACAGGACCTATTGGTGTACAAATTTCCTCAGATATCTCTCGGACCGTCACATCAGAAGCTGAACTCGATGCTATCTGACCAACACCTGTTTCTGTTGAGTGTGTAATTCCAGGAAGCATTTTCGCTGTACAGGCACTCTTCTCTTCAATAAAACCACAGTTTGCCACTTCACTCAAACAAGAGTACTTATGTGGTTTCCCCCTACGGTTTTGTTTTGGATCCTGGAGGTGATTCATATTTGCTCCTATCATGTAATCATTTAGTGTAACTTCATGTGGAGTCCATGTGCGAACTTTAATTGGGTGAATGAAATCCTTAGTGGAATCTTTTGATGCAACTTGTGTGCAAGAATTACTTGGTCTAGAAGAAATTTTGGATTGTTTTCCACTTTGACCATGCTCAACACCACAAATATGTTCCACATTACAACCCCCCAAAGGTTGGACCTTTCTATTTTTCCGGGCTCTTTTTCTAGAAATTACTGGGAGGAAATCACCATCGCTACTAGCATTACTGCATGATTGCATTTCTTGTGTACCACTGCTAGCATCAGCACTGTTTCTGAAACAGGAGAATTTATCATGATTTGCTTTGTTTAGCCAACCTTCACTGCCACCACATTTAGAACCCCTGAGATCTGTCACTTTTGACTGAACACACGGAGGGCACTCATTTTTGTCAATCAACAAGTTCTCGGTATCATCACTGAAGTTCCAACTGCTATCTGTGTAATGGCCATCCAAAGAGGAATCAGTAAGAGTGGAAGTGGAGGCACTGTCCAAACATCTGGAGTTATTGCTGTTAGATTGCTCACAGCATTCAAAATAAGAAGCATGCCTAGACAATTCTATCTCATCACTACAAGATGTACTTGATATCAGAGTTATGAAAGAACCATCGTTACCAGTTTCACTATCAGGTCTCTCCGCAGAAACTTCTCTCACTGAAGAATCAGAAGACAAATCCCCAAACAATTTGTCAGCCACATGGTTTGGAGGCAGTGTCAAAGTTTCACCTCCATCAGCCATAGAAGGAAAAGTCTCCTTTCTACACCGCATTTCAGATCCAGCATGAGCCACATGGTTGGATGAAAGTGTCAAGGATTCACCACCAGCAACATCGATGCAATGAGAAGCACCCTTGCTCTGCATAGACTGTGTGTCAGATGCCTCAGATACTTTTTTGCCATGCACTCTTTTGTGCCTCTTGTTTTTCTTTTTGCTTTTCTTTCGTGAAGTTCGCTTCACGTCCACACTCGCGTTGCTGAAGGTGTTGACTGAGAAATCATTATCAGGGGCTTTGTCTGATTGTTGGGAGTCCTCTAGCAACGCCCTTGATGAAGTTAAACATCTTGCCAAATCCTCTGGATCATTGAAGTGAAAAAGTAACAATGATGGTGATGCGGATGTCTCAAGTTCATCTCCATTTTCCACGAGATGGGATGATAAAGACAATGTGAAGAATAAACGACCACCATTGGCTCTCTTCCTCTGTTCTTCCTGCCTGTATTCAAGCGCAGCTACTTGACGTTCAAACTGGATGTTATGAGGGTTCTTCTTTTCTGTTGAACGCCTAGGCACTATGTGACGATGCTTCCTGTTTGCAATTCTATCAACATCTCCAGAGGTGCTTGCAGGTTGCCGCAGCATATCGTGCTACATTGAGGGGAAACTAATCAAGTAGATGAAAAAGAATGTTTCAAAGACAATTTTTTGCAGTTCGGGCCAAACAACCATGTCATGAACACACTACTCACTGTATTTTTACTTGCAATTTGGACAATGTTTGGCTTTACTTTCTTTAATTATATCTTTACAACAATACTAAACATATAACAAGGTCAAAGTCGAAGTACTTTTGATTAGAAATAAGCTAATCTAAAAATGGTATGAAGCTATTTAAGAAATATATATTTCTGAAAAGAGCATAGAAGACGACAAAAAAATATATTCCGTCCGTTTTCGAATAACTGATACCGTTGATTCTCTCATTCAAATTTATTAGCGGAAACGCAAAAGCTTTGCACGTGAATATATCAGAAGAAACAAATTTCAGTTACACAATGTGCCTACACGGCGGTGGCGCGAAGATTCTCTCGTTCAAATTTGACCGACAATAATTTCAGCCGCTTTGTTTTGTGAAAGAAAAAACACATTGTAAGATTCATTTCGCGCCATACATTTATAGTAGTGCCGAGATCTAAGTATTTGTATATGTATTGATGAAAACACAGTGGTCAAAGGGTCTACAGATTGGTCAGCATTATCTTTTTCACCCGGGCCAGCCTAAGTTTAATTCAGATTGAAGGGGAGAACATACATAGAAATCGACAATACTATCAATTGATAGTGACGTTTCCAATTAGTCAACACTATCAATTACTTATTTACAGTCAGGTAGTGGTGAAGATGCTCCATATTGATCACAGCCACAGATAAACAAATGATAAATAATAGCCTATCCTAGCACTCTACTTGTTGCTGCATCTAAACTCTCCAAAAGAAATCCCAATAGACAGCTAAGCTAACAACAGAAACAGTATGCTTATGAGTTTTTCTCCATTAAACAAAAGGGGGAAAAGCTCTAGGGTGAGCAGCACGATCGACTAAACTAACGAGCTCCACCGAACTCTCATCACTGCCTGAGGCTTAGTGCTCAGATCAGGAAACACGACAAGAATATGCTGGCATAGCGCATCCGATGATCCGATCGACCTACCAAAATCCCCAAAACAGCACACATCTATCTCATCACACCAAGGGTAAAAAAATCCTCAAAGGGCGTAGGGGGGGAGGCCAACCGCTTCCCCTGCAGATGATGTTCCGATCGATCGAGCCGAGATCACCCCGCCTAATCACACCGCCCACAAGAACCCCCCTCGAAATCGGATAAAATCAAAACAACCACCGGAGACGGAGCAGATAGACGCACCTACGCTCGCGGCTCCGCCGAAGAAAAAGGATTGGAAACCCCAAACAAAAAACTAAAAAAAATTCCCCCAAATAGAGACGAGTTATCCGCTCCAATGCGCTTCACATGCGATCCCCACCCTCACGGCGCCGGCCCGCGTCGAGCCGGGACGCGGCGGGGCGAGATCGACGCGGAGAATTCTGGGGGTTTTTGTTCGCCCGCGAGGCAGCAAGGCTGGGTTGGCTGGCTGCAGCAGCGGAGCGGAGGGAGGCGGACGGGCGGGTGGGTGGTGGAGAGTGGTAGGGTGGAGGTGGAAGAGGAGGAGGAGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0287900.1 | 4 | 34458850 | T | C |
| Osa04LNT0287900.1 | 4 | 34459388 | C | T |
| Osa04LNT0287900.1 | 4 | 34459709 | T | C |
| Osa04LNT0287900.1 | 4 | 34461424 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0287900.1 | osa-miR5526 | Cleavage | 5.0 | 15.434 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR6248 | Cleavage | 4.5 | 14.207 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR6251 | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR166b-5p | Translation | 4.5 | 15.218 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR395f | Cleavage | 5.0 | 16.809 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR395f | Cleavage | 5.0 | 16.522 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR166g-5p | Translation | 5.0 | 16.141 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR166j-5p | Cleavage | 5.0 | 18.825 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR414 | Cleavage | 3.5 | 20.631 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR437 | Cleavage | 5.0 | 13.04 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR395w | Cleavage | 4.5 | 16.522 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR810b.2 | Cleavage | 5.0 | 13.346 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR1854-5p | Cleavage | 4.5 | 18.805 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR1861c | Cleavage | 4.0 | 20.69 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR1861g | Cleavage | 4.5 | 20.69 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR1865-5p | Cleavage | 4.0 | 15.69 | 1 | 24 |
| Osa04LNT0287900.1 | osa-miR1865-5p | Cleavage | 5.0 | 17.462 | 1 | 24 |
| Osa04LNT0287900.1 | osa-miR1871 | Cleavage | 3.0 | 11.327 | 1 | 24 |
| Osa04LNT0287900.1 | osa-miR2055 | Translation | 4.5 | 23.316 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR2100-5p | Translation | 4.0 | 18.245 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR2100-3p | Translation | 5.0 | 18.964 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR2867-3p | Cleavage | 5.0 | 21.71 | 1 | 20 |
| Osa04LNT0287900.1 | osa-miR5485 | Translation | 5.0 | 21.548 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR5499 | Cleavage | 4.0 | 16.875 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR5524 | Cleavage | 5.0 | 16.085 | 1 | 21 |
| Osa04LNT0287900.1 | osa-miR5525 | Translation | 5.0 | 17.187 | 1 | 22 |
| Osa04LNT0287900.1 | osa-miR1869 | Translation | 5.0 | 10.162 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0287900.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0287900.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0287900.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0287900.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)