© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0025700.1
ACCTATTCGTGAATTTATTCAAAACTCAACAGCTTATAATTGTGGAACAGAATGGTATTGCCTTATAATTTTCTCCCCTTTGTGTTTATTTTCAGCCCAGTAATATCTACCTCTAGTAGTCTTTGATGTGTCCCCTCAGGAAGAAGATAGAATCACATTGCATAAGAAGGTATAGAGGAAAGGCAGGCATTGATATGAACAGCTCTCCCTGCTTGTGTCAAACTCCTACCATTCCATCCACTCAGTCTCTTCTCCATTCTCTCAAGTAGAAAATTTAACTTAGGAGTAAGAATCTTCTCAGGTCCAATTGGCAAACCCAGATATTTCATAGGAAAAACTCCAATGGGGCAGTTCAACATTTTTGCAACTGTCTCAGTTTCAGCAACCTTCAATCCCACAGTGGAACTCTGAAACTCTCTCCTCCGCTTCATTAAGAACGATTGACTTTCTGTGGAGCATCCAGTTAATTGGTCAACATAGTAAGCTCGTAGCGTTGGACAAAATCGTCGGAGAATCACTGGAGAAATTGAAATCGCCGGAAAGGGATAAGAGGATTTGGGATTATCAATGTGGGGAGAGAAAAGCGAAACGCACCGTTCAAAAACGCAACAACGCTATTTCTGATATAACTTTATCTTTGATATTTTTCCGCTTCCGCTTCTGATAAGGATGATAAAAAAAAAAGGAAAAATAGAAAAGCAATCAGGAAACGGGGCCATGCGAAGAAAGTTGCGGACGGCCCAAGCCCAATACGACAGATACGCCTAGACCAGAAAAGGCAAGGGGAAACCACACGTTTGGGCCAAGATAACGAAAGGGGAAATCGATCGCTCGGCTTTTATCCCAGAGATCGATTAGGATTTTTGATTCGCTCCTACCAAATTTCCTTCCGCCGACGGCGCCTCCAACCCACACGCACGCGCCACCTCCTAACCCTACCTTTCTTTTCTTCCATATATGGATCTAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0025700.1 | 1 | 23431545 | T | C |
| Osa01LNT0025700.1 | 1 | 23432919 | A | T |
| Osa01LNT0025700.1 | 1 | 23433031 | A | G |
| Osa01LNT0025700.1 | 1 | 23433195 | T | G |
| Osa01LNT0025700.1 | 1 | 23433289 | T | C |
| Osa01LNT0025700.1 | 1 | 23433572 | T | C |
| Osa01LNT0025700.1 | 1 | 23433573 | A | G |
| Osa01LNT0025700.1 | 1 | 23433832 | T | G |
| Osa01LNT0025700.1 | 1 | 23434250 | T | C |
| Osa01LNT0025700.1 | 1 | 23434283 | A | G |
| Osa01LNT0025700.1 | 1 | 23434688 | A | G |
| Osa01LNT0025700.1 | 1 | 23434722 | A | G |
| Osa01LNT0025700.1 | 1 | 23434979 | G | A |
| Osa01LNT0025700.1 | 1 | 23435147 | C | T |
| Osa01LNT0025700.1 | 1 | 23435192 | T | C |
| Osa01LNT0025700.1 | 1 | 23435280 | C | T |
| Osa01LNT0025700.1 | 1 | 23435281 | A | G |
| Osa01LNT0025700.1 | 1 | 23435288 | A | G |
| Osa01LNT0025700.1 | 1 | 23435292 | G | A |
| Osa01LNT0025700.1 | 1 | 23435348 | C | A |
| Osa01LNT0025700.1 | 1 | 23435510 | A | C |
| Osa01LNT0025700.1 | 1 | 23435767 | G | A |
| Osa01LNT0025700.1 | 1 | 23435985 | C | T |
| Osa01LNT0025700.1 | 1 | 23435996 | G | A |
| Osa01LNT0025700.1 | 1 | 23436165 | A | G |
| Osa01LNT0025700.1 | 1 | 23437069 | A | G |
| Osa01LNT0025700.1 | 1 | 23437076 | A | G |
| Osa01LNT0025700.1 | 1 | 23437089 | T | C |
| Osa01LNT0025700.1 | 1 | 23435255 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0025700.1 | osa-miR7694-3p | Cleavage | 5.0 | 15.471 | 1 | 22 |
| Osa01LNT0025700.1 | osa-miR1435 | Translation | 4.5 | 11.053 | 1 | 20 |
| Osa01LNT0025700.1 | osa-miR2118a | Cleavage | 5.0 | 23.874 | 1 | 22 |
| Osa01LNT0025700.1 | osa-miR2118c | Translation | 5.0 | 12.67 | 1 | 22 |
| Osa01LNT0025700.1 | osa-miR2118q | Translation | 5.0 | 12.67 | 1 | 22 |
| Osa01LNT0025700.1 | osa-miR2275d | Cleavage | 4.5 | 24.516 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0025700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0025700.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0025700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0025700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0025700.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025700.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0025700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0025700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0025700.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)