© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0288100.1
ATCAAAACTCAGACATTAGCTGTTGTAGGGACGTGACAAGCCAACGAGTAACAAAGGTGTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAGAAGAGGGACCAGCTGATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTGAAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAACAGTACATAAATCTAGTGTGATTGTTTCACTTTTCTCCATCAGAACACTTGCAACATCAGCAGATACGGCATGATCAGACATCTTCTCCATTGCTGCAATAATGCCCCGTATATCATTTCTTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAAATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAGTTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAGAAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAGAAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCTTACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAAATCCCATCCTGTCAATCACACCAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAGACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATCTGTTTCACTGTTTTTGCTCCCTGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTAGTTCACTATATCTTGATTGGACCCTAAACGGTGACATTCTTCCAGCAGAAATTTCTCTCCTAGAATCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAGCACTTTCTTTCCTTGAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAGGTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTACATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTGCCTGACTTGGGAACAATAGGTGCCGAGTCAGCGCTTACTTCCATTCTTAAGTTAGCTCTGGGACCAACAACAGGTGCTGAATCAGAGGCCATTTCTGTTCTAGAGTTTGTTCTGGGAACAACAGCTGCTGCCACATCAGAACTTTCTTTCCTAGAATCATTTGCAATCTCTATTCTTCTACCACTCTTAGAAAGAACAGGGCCCACATCAGCAGCATCACTCCTAGAATCAGTAGCCAGCTCTGGTCCTGAGCTAGTTCTTGGTATTATCACAGGCACCACATCAATTTTGCTAAAATTCTGAAGACTAGAAGAGTTGTTACTCTTCAGTGAACCTCTCTTCAGGTTGGTGCCACTAGATGCAAAGGTTGAATTTCCAACTGTTTTGGTACTGGAGCCATTACCAGCTCTCTGAGGTGTGACTGGAACCAACCCGCTTGAAGTTGTTGATTTTGTCTCTTTCAATGCAGAGTCTGAATTTTGAGAAACTGATAATCTTCCTGTAGAAGACTTTATGTTATTCTCAGAATTTTGTAGAACTGATAACCGCCCAATGTTAGCCCTTGAACCACTGTCATTTTGTAATGGCATAGTGCTACTTGACGAACTTTTCAACTCTGAATGACCATTTAATTTTGTTGAAGTACCCGTTGCATATGGCTCAAGACGCGTTAGATCTACAACCCATATTCCAACACAACTTTGATTAAATGAACAACCAAGAAGTTTTCCCTCGTGGACATTTAGATCAGACAGTCTAGACCATCCCACATCAACGGTATCATGACATCTTATTGGTTCCCAAGAGAAAACCTTTAAACTTTCATGCAACCCACACAACAGAGATCTTCCATCAGGATTGAATGTCATGGATCGAACACCTGTTGTCTCAGGTCCAGTAGACCCAATCAATTCAAAGGTCTCCAAATCCCAAAACTTGACAGTTTTATCGGATGAACCTGTTGCCAGAAGGAACTCATGGGGATGGAAATCTATGCACTGAATCTGGCCTTCATGACACTTGAAATCATGTAATAACTTTCCAGCTGTCAGATCCCAGAGCTTCACAACATTATCTTCACCACCAGACACAACCCAGCGGCCATCAGGTGTGAATCTAATTGCATTTACACCTCTTGTGTGGCCTTTGTACGTGTGGATACAGCCCTTCCTTCTTATATCCCATATCTTCAGATTTGTGTCCAGTGACCCCGAGGCAAAGAATTCTCCAAAAGGATGGAAATCAACTGACATGCAGTTTGACCTATGTCCAGTAAGCGTGCGGACAATTTTTGCCTCCTCTAAATCCCATAGTTTTATTGTTCCACTGGCTGCTCCTGCGGCCACGAAAACTTCTGTGGAATCAAAATTAACAGACTCCACAGCACTGGTGTGCCCTGATAAACTCAAAATTGAATTGGGCTTCCCAATAGCCCAAAGATTAACCTTATGGTCATCTCCTCCTGTCACGAGAACTCGTGAAGTCTTCCTCCCAATCTTGAGGCAGTTGACATTGGATGAATGCGCCACAAACTCCTGGAGCTTGTAGGCGCGCTTGGTGTTGGTCGTCATGGCAGGCAGGTCGTCTCCGAACACCGCGCCTCGGGCTCCAATCTCATCTCCAGATCACGCCGCCGCCACGGCGCCACCCCCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0288100.1 | 4 | 34614124 | G | C |
| Osa04LNT0288100.1 | 4 | 34614346 | A | G |
| Osa04LNT0288100.1 | 4 | 34614561 | T | C |
| Osa04LNT0288100.1 | 4 | 34614634 | T | C |
| Osa04LNT0288100.1 | 4 | 34616286 | A | G |
| Osa04LNT0288100.1 | 4 | 34616760 | G | T |
| Osa04LNT0288100.1 | 4 | 34617347 | T | C |
| Osa04LNT0288100.1 | 4 | 34619852 | C | T |
| Osa04LNT0288100.1 | 4 | 34620178 | T | G |
| Osa04LNT0288100.1 | 4 | 34621961 | A | G |
| Osa04LNT0288100.1 | 4 | 34622690 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0288100.1 | osa-miR5793 | Cleavage | 5.0 | 21.87 | 1 | 21 |
| Osa04LNT0288100.1 | osa-miR5796 | Translation | 5.0 | 14.154 | 1 | 21 |
| Osa04LNT0288100.1 | osa-miR6248 | Cleavage | 3.5 | 22.204 | 1 | 21 |
| Osa04LNT0288100.1 | osa-miR396a-3p | Cleavage | 5.0 | 14.824 | 1 | 20 |
| Osa04LNT0288100.1 | osa-miR396a-3p | Cleavage | 5.0 | 17.499 | 1 | 20 |
| Osa04LNT0288100.1 | osa-miR396b-3p | Cleavage | 5.0 | 14.824 | 1 | 20 |
| Osa04LNT0288100.1 | osa-miR396b-3p | Cleavage | 5.0 | 17.499 | 1 | 20 |
| Osa04LNT0288100.1 | osa-miR396c-3p | Cleavage | 4.5 | 14.824 | 1 | 21 |
| Osa04LNT0288100.1 | osa-miR418 | Cleavage | 4.0 | 13.269 | 1 | 21 |
| Osa04LNT0288100.1 | osa-miR1874-3p | Cleavage | 4.5 | 22.75 | 1 | 24 |
| Osa04LNT0288100.1 | osa-miR2122 | Cleavage | 5.0 | 16.925 | 1 | 22 |
| Osa04LNT0288100.1 | osa-miR5523 | Cleavage | 5.0 | 20.387 | 1 | 22 |
| Osa04LNT0288100.1 | osa-miR6253 | Translation | 3.5 | 22.633 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0288100.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288100.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288100.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288100.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288100.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0288100.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0288100.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288100.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)