© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0288700.1
AGATATAACCTTCTTCACTATCATTGTATTAGCAAAGTATAGTAGGAGTACATACGTTAGATCAGGCCAGGGGTACTAGTCACGCTATAGACCAGACTTTCAGCATCAGAGTGCACTACCAAAATGGTGAAATTACCCACTAGCCAGCAACAAAGAACATAATGACAAGGCTTCTACTTAATTTCTCCATTCTGACTTAATTCTACTTGCAAGAAGAAGAAAAGTCAAGGCCCTTGAGTTAGTCTATGGAGTTCACTCTGTTCATCCAGTGTCTCCACTAGGAGAGGGGGAGCGTACTGCGCGTTCCCTTGGTGCTCTTCTGAATCTTGACAGAAGGAGAGGATTATGGTGTCGATCGACATCTCGACGACTTGGAAGAAAAGCTTGGCGACTATAAAACCAAGTGCCCATGATACCACTACAGGAACAAGAGGAGATGATATCTTGTTATGTGCAGACTTGTACTTGTGAGTGTCTAACATAAGGAAGGCAAAGAGCGCACAGAACAAGCTCACACAGAGCTTCCCCAGAAAGAGGATGACGTCTCCAATGACGTTAACTTTTCCAATGCGCAGTATGTTATTCATGATCAAACCAGTTGCGAGAACAGAAGCTTTGAAGAACCCTTTCCCAGTAATGGCTATCATTATATAGGCATTTCGATTCACAGACTTGAGGGTCCAGTCTATGCAGCCCAGGCAGCATTGAGAAGAGGATGATGTCATTTTACCAAAGCAGCTTTCACGAGCGGAATCAAATAGCTTCAACTTGCGTCTGAGGCATTCTAGTATAAACCGCACCCACTCAACAGCAGATACAACAAGTGAACCTATAGCAACTGAACCAAGGCTGTAACGCAACAACCGCTTCAATGAAGAAACAACTGTAACAAATGGTATGTCATGGGATATTTCACCACGTGCCCAATAGTATGAAGCAACTGATCCAGCAATCACGGTTGAAGAGCACGCAATAAAGAATTGGGTTGCCCAGTAACAGCCAAATAAGTGGAAAAGAATGGCAATACCAATATGAGGGGTGTAATGGATGCTGTACCCACAGCAGTTGTCACAGTTTACTTTGCCCAACTTCAGATCATATGAGCAACAATCTGTATTGCAGTCATTTCGGAGAACTTGACCAGAGCTGAAGAGATGGAGTGTGGCAGAAAACCAGAACATATAAAAGATAGCGAAGATAAAGTATGGCACAACTGGGAAAATAATTAGTGCCTGAACTTCACCAATGACCTTCGCAGCAACCTTCAGGACAGGTGTTGCTATCAGTATACGCCGGATAATAGCTATGGAGGACAGAAATGCAATGATCATTACAACTGTCATCACCACCGTAGCAGCATGAAGGTGGCTTATTTCCCGTCCAGTTATATGCACATATGGATCACTTTCACCAATTACAACTGTCAAGGGATCATTGCCTAACCAGCCAGCTTTAATATAAAAAAACATAGTAACGGAGATTACTAGAGCATTGAAGAGCACTACAGTTATCCATGGCATGGCAGCAACAAAATAACGAATCAGAAGCAACCAGATAACTGACAAGAAAAGAGGGAGCAGTCCACCGCAAACAATTAACACAGGCCATGACTTCCCAATGTCAGCAACGTATCTCTTCAAGACTGAAGATTTAGAATTGATGGCCTTGTGTATTGTTTTATCTATGAGAATATTTTCGTCGATGTTGATACCACCCATCTGCTGCCAATGCTTCAAAGAGACATTGGATGCTCGCGCAATAAATTGGCAGCTCCAGTAGACATTCACACTTGGAAATATGACAGGGTAGCATGGACCCTGCAGCTGAAGAGAACTATTTCTCATATCTGGTGCGAGAAACTCAAAATAATCATAGTCCCTGTTGATCCAATCATCGATAGAGAGGCGAATGTCCCCTTCTGGATAATCACAAACAAAGTTTAATCCGTCTGCTGCTGGAATGGGGCACTCCATCAGGCAGATGGCTTTGGCATCAGCAAGGTTAATCTTGTTGTCCTTGACCCCACTTTGGTACACCTGGTTTGGGTTCATCCAATATCTAACATCAAGCTCATGCAAATCCGGGTCACCATGCCTACTGCCACAAATGTTCCCTTTGTAGTCTAGTTCATAGGTAAGCCTGAAATAGCTCCGTTCTTGGTAATTATTGCTGTCTAAAGAACAGCTCAAAATGTACAGCGGCACTAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0288700.1 | 4 | 34792097 | A | G |
| Osa04LNT0288700.1 | 4 | 34792608 | G | A |
| Osa04LNT0288700.1 | 4 | 34792979 | A | G |
| Osa04LNT0288700.1 | 4 | 34793469 | T | C |
| Osa04LNT0288700.1 | 4 | 34793662 | A | G |
| Osa04LNT0288700.1 | 4 | 34794292 | G | A |
| Osa04LNT0288700.1 | 4 | 34794786 | T | G |
| Osa04LNT0288700.1 | 4 | 34795896 | G | C |
| Osa04LNT0288700.1 | 4 | 34792507 | T | C |
| Osa04LNT0288700.1 | 4 | 34796883 | A | G |
| Osa04LNT0288700.1 | 4 | 34797251 | G | A |
| Osa04LNT0288700.1 | 4 | 34797647 | T | C |
| Osa04LNT0288700.1 | 4 | 34797930 | T | C |
| Osa04LNT0288700.1 | 4 | 34798704 | C | T |
| Osa04LNT0288700.1 | 4 | 34798794 | G | A |
| Osa04LNT0288700.1 | 4 | 34800093 | G | A |
| Osa04LNT0288700.1 | 4 | 34795723 | T | C |
| Osa04LNT0288700.1 | 4 | 34798891 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0288700.1 | osa-miR171c-5p | Cleavage | 4.5 | 19.748 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR413 | Cleavage | 5.0 | 8.802 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR1424 | Cleavage | 4.5 | 15.345 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR1432-3p | Cleavage | 5.0 | 16.577 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR1438 | Cleavage | 2.0 | 17.835 | 1 | 22 |
| Osa04LNT0288700.1 | osa-miR1441 | Translation | 4.0 | 17.57 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR1320-5p | Translation | 5.0 | 16.344 | 1 | 21 |
| Osa04LNT0288700.1 | osa-miR2098-3p | Translation | 5.0 | 16.949 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0288700.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288700.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288700.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288700.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288700.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288700.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0288700.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288700.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)