© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0288800.1
AATCATAAAATGACATTATCCGAGCTTTAGTTTGCCCTTAATCTATGAGACAAAATTTTTGAACAACAATAATCTTATCTTTCAATAATATAAGTGCCCACGCATGCGCGCGGGCCACCTTCCTAGTTTTCCAAAAACATAGCAGATAGAAGCACAGGTATATTACTGATCAACTGAAGGGATCTCCACCGTTGATTCATGATCTGTCGGTTGAGAGAGGTTTCTTGCCATTCAAGAAGATTGCGGCGTATATGTACGTATAAAAGTATAGGATGGCAGCCTTTAAAAAGAGAGCAGGCGTGTCCATGTCCATTCCATTCGGCCAATGCTAGCGAGATACCACCACCTGCTCCTCCAATCGAAGCCCACGTCCCCCTCCTCCTCTCGCCAAGGCTGATCACCGTCCGCCGTGCCGCTTCCCACGCGGGCCGCAGGCCGCTCTCCTCCGCTCTACCTTCAACGCTGTCCCGACTCCCCGCAAGCTTCTGTTACGAACCCACACCCGCCTCTAGAAGATCCTTCTAGTATTTATAGACTTCCTCAACTATTAGACCAATCACAGCCCATATACTTTGGGTTGGTGTGGACTTCTCGTTTGGATCTTCTAGGCCCAATGATACTAGAGTTATGGGTAGTGCTCTGTATTGATGCCGTAACATTCCTCCCTCCTTGAGTTTCAGCCTGTCCCCAGGCTGGTGCAGCTGGAAACTTAGCTTGCATTTCATCTAAACTCTCCCAGGTGTCAGCAGAAGAAGACACACCGGACCAACGAATTAGAACTTGCTTGATCATCTTGGAACCTCGACGAATCGAACGATGATCCAGAATTTTGATTGGAATCGCTAAATGACCAGCATCAGGATTCAACACAGGCAAAGAAGGCTGAACTGCTTCAGATGGTGCGAGAGCCTTCTTGAGCTGAGACACATGGACGACAGGGTGTATTAAGCTGTGAGCAGGCAACTGTAATCTGTAAGCCACCAATCCAATTCGTTGTAAGACTTGAAATGGACCATAATATTTGAAGGATAACTTCCTGTTAGATCGAGTCATAACTGATTGTTGAATATATGGTTGTAATTTCATGAACACCCAATCACCAACCGCAAAACAACGCTCAGATCGCTTCGAATCAGCTTGGCTCTTCATCCGTTGCTGAGCTCGCAACAAATGATGATGAATCAAAGTATTCATGTCATTTCGCTCACTTAACCAACTTGCAAGATCTCCAGGAGCATCAACAGATGAAGTGGATAATCCAAAGTAACGAGGTTTGTGCCCAAATAATACTTCAAAAGGAGTCATACCCAAGGCTGAATGAAATGACGTATTGTACCAATATTGAGCCAATGCCAGCCAATGCTTCCACCGAGAAGGACAAGAATGAACAAAGCAGCGCAAAAACATTTCCACACATTGATTCACACGCTCTGTTTGTCCATCCGATTGTGGGTGATACGAAGAACTCATTCGGAGTTGAGTACCAGCTCGGCGAAACAATTCCTTCCAAAGAGAACTAGTGAACACTCGATCACGGTCAGATACAATAGCTTGAGGTAAACCATGTATACTATGAATATGTTCCATGAAAAGCTGAGCCACTCCAAAGGCAGTAAAGGGGTGTTTCAGGGGTAAAAAAATGAGCAAACTTAGAGAATTTATCCACAATAACCAGTATACAGTCAAATGAAGCCGATCTGGGTAAACCTTCGATAAAATCCATAGTAATTACTTGCCATGATTGAGAAGGTACCTCCAATGGCTGCAATAACCCTGGGTATTTAACATGTCCAGATTTAGCTCTTTGAAAAATATCACAATGTTGGACAAACTCCTGAACATCTTTGCGCAGGCCTGGCCAAGAGAACAACTGCTTAACTCTTTGATAAGTAACCAAAATTCCTGAATGACCCCCCACTGCTGCAGTATGTAAATTGGCCAAAATCTTTTGTTGCAAAAGTTTGTTATGACCAATCCAGATTCTATGTTTAAAATACAAAATGCCATTCAGCACTTCAAAGTTAGATGGACCTGCACCTGACACAGATAAAGCTTGAAGTAATTTCTGAGCCTCCGAGTCAGACTGATAACCAGCAATTAGCTCCTGTAGCCAGTCCGGCAAACATATAGAAATGGCAGACAATTCCTCCAAACCATCAGATTGTCGGCGAGATAATGCATCAGCAGCCCCATTCTCCAATCCCTTCTTATAACAGATTTTATACCTCAGACCTAAAAGTTTAGTCAAAGCTTTTTTGTTGCCAAGGGGTCGACAATCTCTGATTTATTAGAAAAGACAGACTGCGATGATCCGTTCTAATCACAAACTCGTCATGTTGCAAATAAGAACGCCAATGGTCAATTGCTAACATGATTGCAAGACTCTCCTTTTCATAGGTAGACAAACCTTGAGTGCGAGGTCCAAGTGCTTTACTGAGAAAGGCAATGGGATGACTATTTTGCATAAGAACAGCTCCAATCCCTTTGTCCGATGCATCCGTTTCAACAACAAAGGGTTGCTGAAAATTAGGTAAAGCCAATACTGGAGCTTCAATCAAAGCAGTCTTGAGAGCTACAAAAGCCTCCTGAGTGACAGAAGTCCATTGAAACAGTACCCCTTTTCGTAGCAAATTGGTTAATGGTTTACAAATAACACCATAATTTCTGACAAACTTGCGATAGTAACCAGTTAATCCCAAAAAACTACGCAAGTCTTTGACAGAAAGAGGAGTGGGCCAATCCTTGACAGCAATAATTTTCTCCTCATCAGTAGCTACCCCCTGAGCACTAATGATGTGACCCAAATAAGCCAAGCTTTGTTGAGCAAAAGAACATTTTGAGAGTTTAACCTTCAATTGGTGATGTGTCAAAGTGCTTAATACTTGTCTCAGATGATTCTTATGCTCTTCCAAAGAACGACTGTAAACTAAGATATCATCAACAAAGACCAAGACAGACTGACGCAATTGAGCTGCCAAAACAGAATTCATAACACCCTGAAAAGTGGCTGGAGCACTGGTAAGACCAAAAGGAAGAACTCTGAACTCGAAATGGCCATTGTGGGTCTTAAATGCAGTCTTATGTTCATCCTGAGGAGCCATGCGGATTTGATGATATCCCGAGCGCAAATCTAACTTAGAAAACCAACAAGCACCCGCCAATTCGTCCAATAATTCATCAATAACAGGTAAAGGGTATTTATTCTTGATGGTTATGGCATTGAGATGTCGGTAATCCACACAAAAACGCCATGTGCCATCTTTTTTCTTGACCAACAACACAGGAGAAGAAAAAGGACTGGAACTAGGACGAATGATACCTTTTTTCAACATTTCCTGAACTTGTTTTTCAATTTCATTCTTCTGATCAGGTGTATAACGATATGGGCGAATGTTGACTAGTTGTGCTCCAGCAATCAAAGGGATAGTGTGATCATAAGATCGAGAAGGTGGCAACCCTTCTGGTTCAGTAAAAATGTCAGCAAATTCATCCAAAATGGACTGAATTGAACTTGGAACATTTTGAGAAGAACTAGAGCCGTCACTGGCAGTGAGCTGAACCAATGACTCCACAGCTCCTTGATTGTGCAACAACTGTAACTGGTGAATAGAGACCAGATCACATTTATCCAATTCAGGTACCACTCCTTTAAGTTCCACTGACTTATCATGAAGACAAAACTGAATTGTTTTGGCCTGCCAATTGATATCCATTGGACTATATTTCTCTAGCCAGTCCATACCCAAGATCATATCATAATTGTCCAAAGGAAGCAGTTTGAAATTAGTAGAGAACTGATGCCCTTGAACCTCCCATTTTGCAGCCGGCAACTCAGAGGTACAATAAAGAACAGTACCATTGGCTACCTTTACTTGAATTGGAGTAAGTAAAGATTTCACACCAGTGAGATGAGGTAAAACCACTGAACTAAGAAAACTGCAAGAGCTGCCTGAATCCACCAAAATTAACACATCAAAGCCTTGAATGGACCCTTGTAATCGCAAAGTATGTGCAGAAACCGTGCCTTGAATGGCCTGTAAAGAAATAGCCATCAGACTAGAGGTAGAATCAGCATCCTGTTCACCATCAGAAACATCAGCTGCCAAAACACTGAAAAGTTCTTGAACAGCATGTAACTGTACTGGTCCTGAACACTTGTGAGTAGGAGACCACTTTTCAGCACAAACATAACAAAGACCTTGAGCTCGTCGATAGGCCTTGAGAGCAACCAATTTGTCAGAAGAACTGGCCACTTTAGGAACTTCAGCTGCTCTTTTATCATCTCCCTTGCCAGCATGCACAAATTTGGGTGGTGGTAAAGGTAAAGGGTAAGCGCCTTTAATTCGAGCAGCGTGATCACCCAATTTCTTCCCATCCTTGGACACCAAAGATCCACCAGCCTCTCCCAATTCCTCCTGTAAGATAGCAAGAGCCAAAGCAGTCTCCAAATCTTGGGGAAAATGCATTAACACTGCATTTTTAATATCACTGCGTAATCCCTCCGTGAATCTATGGACACAACTCACAGTGCTCAAGGTTGGATCATAAACCAACAACTGACTCCACAAATCATCAAAACGCTCATAGTACTCATTCACCGACCCTGACTGCTTGAGCTGATCAATCTGACGAACAAGCTGAAGGTGTCTATTCCTATCAAACTTCCTATCCACCGTATCACAAAAAACTCCCCAACTCCCACAAAGCAAATGAGCTCGCGAAGAACGTAACCAAGATGCAGCTCGACCAATGAAATAAATGGTAGCTACTCTAACCCACAAATCTGGATGAGTGCCATAAACCCCAAAATAATGTTCACATCTTAAACGCCAATTCTGAGGATCACTGTCATCAAATTGGGGAAAATCCAATTTCGGCAATCTGTGATTGTACCCACGCCCCTCTGATCCCCCACTCTCCTCGCGACCAACAAACTCCGAAAAATTTGAATGAACACGAGGAGGAAACGGTAGAGAGTGCGTACCCTTGCCCGGAGGTGGGACGAGAGTAGTGACTACCCCCGGTGCCCTCCCCCGGAACTGAGTTGAAATGCGGTGGCCATCCAGACCAATTTCGCCAGTCGAGGCTGGCATAGACGCGGTTGGCGGCGTCGGCAACAGAGGTGCGTGACGAGCAATTTCCTCCCGCTCCTCCAACGCCTGCGATACTGGCAGAGACGTGGTTGGCGGCGTCGGCAGCAGAGATGTGCGACGAGCAATTTCCTCCCGCTCCTCCAACGCCTGCGAGGTGTTCGACGATTTGTCAGCTTCCGCTTGATGTCGCTCCACCGCACCGACTTGATTTCTCAGCAACTCCATGTCACGCTGCAAGCTCTGCACCGCAGCATCAACTTGAGGTCGCCAACTTGAAATGGATTTCTCCATTTTGTTCATCGTCTCCTGCACCTCGCCTTGCTTCACCGACAAGGCGCCGATCGCCTCTTGAATACTGGACAGCATCTTCCCGAAGCCTTCGTGCTGCTTCTCCATGGCGTCCACTTGACCTTGCAAACGCGTCTTGAATGTTGGCCGCTCCAGGATCGGGCTCTGATACCAAGATGTTACGAACCCTAGATCGAATCACAGATGAAATTGGGGATGAGGAGGAAGAACAGAACAGAACATAGCATTTCAGAGCAGAGGAAGAAGGAAACAGAGTTAGGAGGAGGAATGGTTTCTTCAGATAGAAGTTAGATTCAATTACCACACCCGCCTCTAGAAGATTCTTCTAGTATTTATAGACTTCCTCAACTATTAGACCAATCACAGCTCATATACTTTGGGTTGGTGTGGACTTCTCGTTTGGATCTTCTAGGCCCAATGATACTAGAGTTATGGGTAGTGCTCTGTATTGATGCCGTAACAGCTTCGTCTGGAGGTGCAGCCGGACGGTAGCAAGGTGGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0288800.1 | 4 | 34853441 | T | C |
| Osa04LNT0288800.1 | 4 | 34854231 | A | G |
| Osa04LNT0288800.1 | 4 | 34854546 | A | G |
| Osa04LNT0288800.1 | 4 | 34854796 | A | G |
| Osa04LNT0288800.1 | 4 | 34855078 | T | C |
| Osa04LNT0288800.1 | 4 | 34857776 | A | G |
| Osa04LNT0288800.1 | 4 | 34857872 | T | C |
| Osa04LNT0288800.1 | 4 | 34858176 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0288800.1 | osa-miR5539a | Cleavage | 4.5 | 19.678 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR1440b | Cleavage | 4.0 | 10.56 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR6254 | Cleavage | 5.0 | 14.704 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR5539b | Cleavage | 4.5 | 19.678 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR156b-3p | Cleavage | 4.5 | 22.465 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR156c-3p | Cleavage | 2.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR156f-3p | Cleavage | 1.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR156g-3p | Cleavage | 2.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR156h-3p | Cleavage | 1.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR156j-3p | Cleavage | 1.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR164a | Cleavage | 4.5 | 15.82 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164a | Translation | 5.0 | 19.645 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164b | Cleavage | 4.5 | 15.82 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164b | Translation | 5.0 | 19.645 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR156l-3p | Cleavage | 1.0 | 22.465 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR164e | Cleavage | 4.5 | 15.82 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164e | Translation | 5.0 | 19.645 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR166k-5p | Translation | 5.0 | 11.296 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR169f.2 | Translation | 4.5 | 18.552 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR169i-5p.2 | Cleavage | 4.0 | 24.033 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR171e-5p | Cleavage | 5.0 | 20.438 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164f | Cleavage | 4.5 | 15.82 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR164f | Translation | 5.0 | 19.645 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR1426 | Cleavage | 4.0 | 19.243 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR1854-3p | Translation | 5.0 | 18.386 | 1 | 22 |
| Osa04LNT0288800.1 | osa-miR1873 | Cleavage | 4.5 | 19.386 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR1862d | Cleavage | 3.5 | 17.157 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR1862e | Cleavage | 5.0 | 17.23 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR1862e | Cleavage | 5.0 | 9.766 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR2121a | Translation | 4.5 | 15.881 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR2121b | Translation | 4.5 | 15.881 | 1 | 24 |
| Osa04LNT0288800.1 | osa-miR812o-5p | Translation | 4.0 | 18.705 | 1 | 21 |
| Osa04LNT0288800.1 | osa-miR5083 | Translation | 5.0 | 17.779 | 1 | 20 |
| Osa04LNT0288800.1 | osa-miR5338 | Translation | 5.0 | 18.589 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0288800.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0288800.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288800.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0288800.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288800.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288800.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288800.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288800.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)