© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0289000.1
GGGCAGAGAAGAAGGGTTGTTGGCAGGTAGAGTCCAAAGGACAGCTCACATAGGGAACCCATGTTAGGGACGTCTCTTAAGCCAAATGGGCTCTTGTTATATGCTATGCGCACTGTAATCTTCCAATACATAATTGTATTAAGAAAAGTATGATTAGATGCAGTGAATTTGTGGTACCATAAAGGTCACATAGGAGTATCTTTCACACTAATGCGCGAGACTTTGAACCAGCCAACCAGAGTTTCTGATAATTGATTGTCTCCACTAGGACATAAGATGCAAGGAACGGTGCGCCTTCCAATTACTGTACACCTGATGCCTGCCGTATAATCACTGTGCAGCTGCGCTCCAAGTTGGCATTCGGAAATATGCCCTCGTGGTTTCCATGCGCTTTAGCTATGGCAGATGATGAATAAGGCTTGGAGCCTGCTACCTCGTTCGCTGACTTCGCCTACAGGAGTCAAACAGTTAAATGGGATGTTTGATGCAATCAGAATCCCTGATGACCTGATCACTTCGTAACTTCTTTGCAAATAGATTACCAAGAGCTTGCTCAAGTGATTCTGGAGTGTACTTCATATATTTTAAAGCGCTGTGGCTGTTCTCAACAAGAGGCCCAAAGTGTTTCAGGAAAGATCTATAAGCAGGTAACAATATTTCAGCAATCATAAGAATTAGGGAATCTCGTAAATCTCTGTCAGGAACACCCCAGTTCATCTGTTTCTGGCAAATCTCTTCAAATCGCATGTTGAAACATTTCAATCTCTCCTTGATCACAGATCTGGAGGTTGTACTGTTCTTAATATTTCTAAAACTTCCTTGAGTGACATCAATTGAAGAGCCTACTGATGAAGTGAGACCTTGAGTTGATAGACACTCCAATACCTTTAGCCAAGCAACTCTTCTATATCGAGTAGCATGTTGTTGCACAATCCTTCGTTGTCTTTCAATCCAATCAGCACCTAATAAATCCTTCAATTCTGATCTGCCAATATACTTGACAATATAATGGATGTTGTTCATCAAAAAGAGGTGCCCCAGAGCAAGGTCCTTGTATTGCTTTGCCTTCATAGCTAGATTGGTCTCCAGAGCATGTATTGCACCAACAATTTGAGAGACCACATCAGTATCTTTTTCATCTTCAACACAGGGATCTCCAAAGATCTGCTTTATTGATGATTGATAGTCAAAAAGAAACTTGATATAATCAGTGACATAGCTGGTCATATAATGCACAGCCCCATCAACAGTCGTACTCGTCACCGAGTGATTCAGAATGTATTCCATGAAATCACCTATTGTCTTTTTCGCAGTCTGTGCAAGGCTTTTAGTTAAAGTAAGGGCAGATTTCTGGTTTTCAGAGCATGCATTACCCTCAAAGATTGCATCAACCTTGGATTGAAGTTCCAATGTTGCCTTATACATATCTAGAAGTATATATAGTTTGTCTGGCAATATTTGGGATTGAACAACAGCATCTCCAAAACTGAGTAGAATTGAAAGGCTTTTAGCTGTTACTTCAGCAAAACAATGGTCTTTCCATGTATACTTTCCTTCAAATACTTGATCACACAGAATGCGTTCAGCGCCGAAAAGCAACTTTACTGTAATTCGGGAGAATTGTGTCCACTCGGCGATTTTAGCTTCCATGCTCTGAGCCTCAACTTGCTGCATTTCTTCTTTTGTAACATATTCAACTCCCAAGCGCTTAAGAGTCCGTTCCAAAGTTGAACTACGAATTTCTCTGTATATTTCCATAAACTTCTGATGGCAATCAAGTTGAATTGATTTCTGTGCTAACTTTGAGAGCAAAGTCAAGTAACAGGGATCAACGAGTGTAGGAAGAGTGCACTCAGCATACTGTTTTAGCGGTGCTTCAGAATAATCACCGGCTGATGGGCCAATAAGGTCCTCACTTGACAATTGCCGATTAAGACTTGATAGACAGTTGAAAATATTCTCAAGATCTACAGGTTTGCTGCATTTGGTTAACAGCCTGTGGAATTCATTCTCCAACCCATGGATTGCTTTAGAAAGCAATTCGTTAACACGTTCGTGAACATCATTACCAACTCTACATCTTATCTTGGAAGTAAAAAAGTATTCGACACTAGTCAACTTATCAATCGCCTCAAGATAGGCATTAAGATCCTCGTTTGGTCTGTCCAATAATATCACATGTTCTGCCGCGGCGCGCCGGCTCCGTCGCGCTTGCTAGGCGCCGCCGGCATTGCTAGCCCTCCTCCCATTCCCCTCCTCCGGCGGTCGCCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0289000.1 | 4 | 35014495 | T | C |
| Osa04LNT0289000.1 | 4 | 35013758 | T | C |
| Osa04LNT0289000.1 | 4 | 35014445 | C | T |
| Osa04LNT0289000.1 | 4 | 35015441 | C | T |
| Osa04LNT0289000.1 | 4 | 35017640 | T | G |
| Osa04LNT0289000.1 | 4 | 35017711 | T | C |
| Osa04LNT0289000.1 | 4 | 35017986 | G | A |
| Osa04LNT0289000.1 | 4 | 35018820 | T | C |
| Osa04LNT0289000.1 | 4 | 35019067 | T | C |
| Osa04LNT0289000.1 | 4 | 35015932 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0289000.1 | osa-miR5516b | Translation | 3.5 | 20.861 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR6246 | Cleavage | 4.5 | 17.885 | 1 | 23 |
| Osa04LNT0289000.1 | osa-miR395b | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395d | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395e | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395g | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395h | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395i | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395j | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395k | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395l | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395s | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395c | Cleavage | 4.0 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 20.964 | 1 | 20 |
| Osa04LNT0289000.1 | osa-miR319b | Cleavage | 5.0 | 20.964 | 1 | 20 |
| Osa04LNT0289000.1 | osa-miR166l-5p | Translation | 5.0 | 15.145 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR171i-5p | Translation | 5.0 | 16.763 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR417 | Cleavage | 5.0 | 19.898 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395m | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395n | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395o | Cleavage | 3.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395p | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395q | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395v | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395r | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR1875 | Translation | 4.5 | 13.242 | 1 | 24 |
| Osa04LNT0289000.1 | osa-miR2093-5p | Cleavage | 5.0 | 18.091 | 1 | 20 |
| Osa04LNT0289000.1 | osa-miR2275a | Translation | 4.5 | 19.407 | 1 | 22 |
| Osa04LNT0289000.1 | osa-miR2275b | Translation | 4.5 | 19.407 | 1 | 22 |
| Osa04LNT0289000.1 | osa-miR2929 | Translation | 3.5 | 15.446 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395y | Cleavage | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR5155 | Translation | 5.0 | 16.811 | 1 | 24 |
| Osa04LNT0289000.1 | osa-miR5516a | Translation | 3.5 | 20.861 | 1 | 21 |
| Osa04LNT0289000.1 | osa-miR395v | Translation | 5.0 | 10.443 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0289000.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0289000.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289000.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0289000.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0289000.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289000.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289000.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289000.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)