© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0289200.1
TCTCAACTAAGTTATTGCCGGATGTACATGAGCCAAAATTGCACAGGCTGGAAACACAAAAACTAGAGCTGTATTAAAATATCCCAGTGGCTGCCGCCTTGTTCAGCGTTCTTCTAAATTTAGTACACATATTATATGACAAAACAGAAAACTCATACCAATCAGGTGTGAGTAAAAAAATATTATACATGCAAGCATCCGACATATATACAAAATCATTTCTATGCTGCCGTGCTAGCAACAAACAGTAGCCTGGTAGTTTTGAAGAAAACCTCTAAGCTGTTTTCACAAAGGTCACAAGGAGCCCATGTATTCTCTATCGCGCCGATTTCTTTTGTATCTTTGCTTTGGGATGTCGACTTCCTGTCTTGGAAACCAGGACATGCCGTAAGATATCTTCCAATTCTACAGTAATCTCTGAGAAAAGGGGCCGCACATGAGGATTTTCATCCCAACATCGTTCAATCAGTTTGGACAACCTCGGATGCACCTTCGGTGGGATCTCCATGCGCATTCCCTGCCTTACTCCCAGTGCAGCTTGCAAGGGTGTCAGATTTTCGTATGGTATCTTTGTAGTGACCAACTCCCATAGAACAATAGCAAAGCTGAAGACATCTGCCTTATGGTCATAAGGCTTATGGTTTATTACCTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGCCGAGAGACACCAAAGTCTGCGATCTTCACGACTTGACCAGAGCCAATTAGCAAATTGGCAGTCTTCAAGTCCCTATGGATGATATTATTCTGGTGCAAATAATCCATTCCTTTTGAGATACCAATAGCAATCCTAAGAACAACAGGAAGCTCCAAAGTATTGTTTTGCTTATGAAGGAAGTCATACAAATTACCTCCGGGCATGTACTCTGTTACAATGAGATACTTTCGATGCTTTGTGCAAGCTCCATAAAATTGGACAACATTTTCATGATCAACACTCTTTAAAATCATTATTTCTTGCAAGAACTCCACTTTCGAAGAATCGTTAACATGTTCAGATCTAAGAAATTTTACTGCAACATCCACACCGAGATAAGTTCCTCGATATAGATCCCCAGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCCATGGCTGCTTGCCTCTGCCTCTATAAGCTTCTGAAGCAAACCATCCGTTTCCTCTGTATCCCAGCCATCAACAACAAACACATCGAGACAAAAGCCATCTGATGTTGAGAACACATGAGCTTCACGGATGTTCAACCCAATATCAGACAGTATCGCGGATAGCTTACTGAGGAGCTTTGGCTTGTCTATGGAAGAAAAAATAATTTCATGAACACGGACGAATTTCGAGTCCCTTCTTGCAGAACTGGCTTCGAAGTCATCCACACCTTTTCCTCTCTCTAGACTCAGGTCTTCCATCATCCTTTCATATGGCTCGGATTCTGTGAATTCATCATCTCTCAAATTGATAGGGAGAAAGCCCCCACCATTACCGTTTTCAGTTGGAGTTGATCCAGAGTCTACCCCTATGTAGCGGGCATGGAAGATTGGGCGCTTTTCAGGGTCGGCGCAGTCGGCGAGAATCCTCCGGTGCAGCAGCACTTGCTCTGCCTTGCTGACATCCAGATCGATCAAATAGCTTTCGGGCAAGCGAAGGAAGTGGCGGTCGAGCTCAACGCGGAAGGAGGAAGGGTTGGAGATGGCCTCCTCGTTGCGAATCGCCACCAGGCGCTCGTAGATGACGTTCCTAATGTCAGGGGACCCGTGCACGCTACCGCCGCCGCCGCCGCCGCCGGAACCGAGTCCCGCGGCGGCGGCGGCGGCACGGGGAGAGGGTCCCGAGCTCTCGGCCACGCCCTCCTCGATGTCGTCCTCCATCTCCCCCGCGGCGGCGAGGTGCCGCCTACGCGAGTCCCCCCATAGCGACGTCGTCCACTACGTCTCAGGAGGAGGCGGCGAGAGAGATGCGGTAGTAGAAGCAGCCTGAGCTGAGGTATCCAATCCAAGAGGTGGTGAGGAATCCGAGGGGACTCTTTTGGCGCGAGAATCTTCTAGAGGATGGCGCGCGCCGGCCGGCGGGCGGTGGGCTAATATTGTAGGGTGAAATTCCTCGCCGGAGCGGAGATTCCAATCCAAACGCCGGCGAGGCGAAGCGAGACGACGAACTGAGCAGCGTCTCGCTCTCTCGCCAGCTCGCAGGAGGAGGAGGAGGGAGATTTTCCTTTTCTCTTTTTTTTCCTTTCTTTTTATTATGAATTTTTGGCTTTGGTGGAATGGAATTATGGAAAAAAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0289200.1 | 4 | 35094022 | A | G |
| Osa04LNT0289200.1 | 4 | 35091992 | A | G |
| Osa04LNT0289200.1 | 4 | 35092127 | G | A |
| Osa04LNT0289200.1 | 4 | 35093963 | A | G |
| Osa04LNT0289200.1 | 4 | 35094114 | A | C |
| Osa04LNT0289200.1 | 4 | 35094145 | C | T |
| Osa04LNT0289200.1 | 4 | 35095761 | G | A |
| Osa04LNT0289200.1 | 4 | 35098008 | G | T |
| Osa04LNT0289200.1 | 4 | 35098177 | G | A |
| Osa04LNT0289200.1 | 4 | 35098298 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0289200.1 | osa-miR5822 | Cleavage | 5.0 | 18.127 | 1 | 21 |
| Osa04LNT0289200.1 | osa-miR6252 | Translation | 5.0 | 18.06 | 1 | 23 |
| Osa04LNT0289200.1 | osa-miR166c-5p | Cleavage | 5.0 | 22.414 | 1 | 20 |
| Osa04LNT0289200.1 | osa-miR319a-3p | Translation | 5.0 | 12.06 | 1 | 21 |
| Osa04LNT0289200.1 | osa-miR166k-5p | Cleavage | 4.0 | 22.414 | 1 | 21 |
| Osa04LNT0289200.1 | osa-miR444d.3 | Translation | 5.0 | 14.222 | 1 | 21 |
| Osa04LNT0289200.1 | osa-miR1846e | Cleavage | 4.5 | 20.975 | 1 | 20 |
| Osa04LNT0289200.1 | osa-miR2106 | Translation | 5.0 | 16.394 | 1 | 21 |
| Osa04LNT0289200.1 | osa-miR5503 | Cleavage | 4.5 | 15.532 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0289200.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289200.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Osa04LNT0289200.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0289200.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289200.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289200.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0289200.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0289200.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)