>Osa04LNT0290100.1

TCAGCGATCCGTCCGTAACGCCTGCGTGCCTCTTGCCTGGTTGTCCATGCGCGCCCTTCGTACCGCCTGCTGGATTTGACGCTCGTGTTCTTTGAGAATCTCCTCCATGTTACCTCCGTGAGGCATCAACGGCCCAGAGTAGTGGATCCTGTTCTTCTTACTGCCATTCACCTGATGATACGCCATACATGCCTCCACGTTCGCTCTCATGACCACAGTATGCTCCTTGTTAGCCGCCCCACCTTCCTTCCGATGGGAAGATGACGGTCTTTCTTGAAACTGGTGTGTCCATTCAGATCTACCGGAGGAATCAACAGCAGTTAATTGCCTGTACCTTGACCTAGATGGATGCTCTCTCAAATGTGGCCTCTTGGCACCATCCCCATGGTTAGATGACCGAGTAGCACCGCCTCGTGGCTCAGCAGCACAAGACAAGTTCGGCATCTGAGATGTGTAAAATCTTTGGGTCTTTTCATCAGTCTCATTCGATCGGCCCAGAGTAGACGATGAACGGCCAGCATGCAACAGAGGAACACGCTGAGCAATGCCATTTTCGCCGACTCTTGCTGGAGGATCAATTCTAAAGCCACGAATGCCGTCATCCATCCGAGTGCCTTTTCTATTTGCCTGTGCCCGTCGTTGCTGCACAACAGAAGCAAAAACTTGAGA

Explanation	CPC Score
noncoding	-1.2908

Transcript ID	Chromosome	Locus	Ref	Alt
Osa04LNT0290100.1	4	35490085	A	G
Osa04LNT0290100.1	4	35490278	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa04LNT0290100.1	osa-miR5813	Cleavage	5.0	11.716	1	22
Osa04LNT0290100.1	osa-miR5829	Cleavage	5.0	14.678	1	24
Osa04LNT0290100.1	osa-miR5144-5p	Cleavage	5.0	17.848	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus