© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0290900.1
CATACATTATATGCCATAACTTGATGGCAGCAAGAAGGAAGCCACATTATTACTTATCGAATTAATATTAACAATGCCGGAAGATCTGTACTGTACTATCACCTTATCATTTATTATCTACTTAAAAACAAATACCACATCTCTCTATGCTCATCCCTGCAACTCCCATCACCTACCTCCGTATGAACTAAACTACAAATGCCATGTTCTACGCCAAATTGTCGACAAGGTCTTTTTTTTTTCTTTCTTCAAAGACAATGAGACTGAAAACCTGTACTTTTCACTCACAACAGCTGCTTTGCAATTGTACACACTTCTAGACAGCCTGACATCAACAAGCAGCAGCAGGCCAGCAGCTGGGACTGGGAAGCCGAATGCCGAGAAATGCGAACCGGTCAGACAAATCATTGGTGGATCTCGCATAGCTCCCAGTTTCCTTCTCCGTCGATGAGTTTCAGCTCCAAGGAATGGAAGGGGATCAAAGCTGGCCTTTGCGAGGAAGTAATCACAGTGATGCCCATGCTAGTTGCTAGCTTGTACAAATGCTCTTCAACATCAACGCTTGTAGCATTCGTGCATTCGTCAAGAATACCAAATTTAGGATGGTGGAAAAACAAACGGGCCATCCCAAGCCTCTGCTGTTCTCCCAACGATAAAACATCTTCCCAGTTTGAAGTTGAGTCCCATCCTTCTCTTTCTAGAAGATAGACCAACCGAACATTCACTAGAATTGTCTTCAGGTGATCATCCAGCAGATTAGAAGCACTAGACCCGTTACCATCATTGTATAACGAACAAATCTTCATCTCTGCTTCCTCCCTTGAGAGAGGGTATATGATCTGATCTCTCAGAGTACCCAAGCTGGTATATGGACGCTGAGGAACATGAAACATCCCATCTGAAGGTTTGGTAACTCTCCCAGAACACACTGGCCATAAATCTCTCAGAACTCTGAAAATAGAGCTCTTTCCACTACCGTTGGGGCCAGTCAGAAGAAGGCTTTTCCCTTGTACCACATTGCACGACAGCTTGCTAGCCAACAGTTTCTGCGATGGTGTTACAATATCCACTTCGTGAAATGAAATGGTTTCTTCTGCACTAGTGGCATCGGAAGGCACAAAAGTATCCCTTTGAGATACACGAAGAAGCTCCTCAAGCTCAAAAATCCGGTTAATCCCACCAGAAAGTTCAAGGAACTTTTTGTGTAAGTCAAGAATGTCACCAAAGGCTATGAAACTTTGTGACACAACAGATGCCAAGAACCGCAGAGCATGTGCCAACTCTCCTTGAGTTGAAGTCAAAGCTCTGTCACCCTTGTGCTCTAGAGCATATAACAAACTAAGACCCCATGTTACATTGTGAGGGAGTTGCTTTGTTACAAAATCATCAACAATACCATAAAGCCACTGCTTTCTCAACAGAATCTTTGAGTGGTCAAGCAATTTCATGAATTTAGCCTCAACAATAGCTTTCTCTCTTGATCCACCACCAAAGAAAGCAATTGATTCAGCATGCGTTCGCAGTCTCGAGTGCATGAACCTGAAAGTTCCTTCAAGCTCTTGTTCTTGCCCAGCAAGATGACCAAAGTCTGGGGATACAGCTCTCAGGAAGCCCAAACCTAGCAGCATGTAAGCATACAAGATAGCAACTCCTCTTCGCCCAGACAAAAGCTTCATTCTCCATGTAAACCAAAGAATGTCGACAAGTGGTTTTACCATTCCAGTAACTAAGCCAGCAAGGTCGGTGGTCAATTTATCCACATCAAGTGTTAATCTTTGGTCTGCATCAATACTTTTACCTGACATGTTGAATACCTTGTAGAATGCATTTCTTTTCAAATAATATTGAAGCAAATGATTGGTCAGGCGAATCCGCCATCCAAGGGCAAGTCTTCCAGTAAGGGTTCTCAAAGATGGGGCCACAAAAGAATTTGCAGAACTTTGCAGGACACTGATACCAATCAGACGAATAAATGCAGCTTTGTCCTGCTCCAAGACAAACTTAACAGTTGTCCCATTCAGTGAAGCAATTCGGTCTGAGATCCAAGTTCGAGAGAAAACAAGTAGTGCAACAGCAAGCAACTGCCCTCCTTGTTTGTCAAGTAGCTTAGGAACCAATATTTTGACCATTGCAGCTACTCTGGCAGGCAGAGGCCTTGGGAAGCACCGTAAATGCGGGACTCTATGTGTTTGTATTGTTTGTTCTATTTCCAACTTGGGAGAAGTTGCTATAACCTTTGTAGTGTAGCAATGTTCTTTGGACCTTGATGAAGCATTGCTCTTTGCCCTGCCCATAAATGCCCTTTGAACAGTAAGCGCATCAGATTTACGATCAGTTTCCAATAATGTATAGTCAGACTCTTCAGTAGAAAAGGATGAGTCATCCCTTCTGTGCTGGACATCCCACCCTCCTTCACCATCCAAAGACAAAACAATGTCATGAAACGCAACTAAAGCTGGGCGATGAGATATCGTTATGCATGATGTTCCCATTGCTCGAACCTTTTTGCAAAAGCGTTCTTCCATATCAATTGTCACAGCGCTAGTACACTCATCAAGGATGGCGAACTTTGGTTTATGGTAGAATAACCTTGCCATTCCTAATCTTTGTTGCTCACCAAGGGACAATTCATCACCCCAGTTAACTTCCTTATCAAGAGGATAGCGTTCTAGCAAGTATTCCAAGTCAACATTCTTTAGAAGGTCCACCATGCCATCGTAGCTAAGGGGTTCAATCTCCTGATCTGCTGTAAGAGGATAAATTAGCTGTTCACGAAGTGTACCAACAGCTGTGTATGGTCTTTGCGGGACATAGAAAATTTCCTTATTAAGATCAGAGCCAACACCCGGTTTGACAATATGACCAGAAACTAATGGCCATAAGCCTCCAAGGACCCGAAAAAGAGAACTTTTTCCGCTACCATTCGGACCAGTGATCAAAAGATTAGAACCCCTTTCTACTCGGAGAGTTAAATCATCAACCAAGACATTGCTAGCAGGCGTCACCACCTTAACACCCGAGAATTCGATATGGTTTGCTTCACTGATATAATTTCCAGCAGAGGAATTATGATTTAACGATTTATCACGAACCCCAGACAGTTCACGTGAAACATCCAGTAACTCACGAATGCGGTCTGCATAGCCACTTAGAATATTTAAACGTCTTGTGCTTATAGATAGGATCCCAAGAGACTGAAACAGTGATATGATTACGCTTGTGTGGTATCGAAGATTACTTAACATTTCAGCCCTTCCAAGTGTGGATGAATCAGGTCTGAGGTGGCCAGAGAAGAAAGGTTCAATAATGAGGACAACTGCTACAGTTGCACCAAAATACTTCAGAAAGAAATCTTGAATCATGCCGAACCACCAGTTTTCATGGAGTACACAATTCAGGTGCCCAATAAGAGCCTGGAAACGCTGCATGATATAATATGCTTCTCTGTTCTCACCACCATAAAATGCCACACTCTCAGCATGAGTTCTTAATCGTGAATGAAGCTGACGATAATCTCCTTCGAGTTGCTGTTCTGTGGATTTCAGCTTTCCGAAAGCAGGGGAGAAATTTCTAATTGCTCCACCCGCAACTAGTATATATCCCACAATCCAGAGCATGTATTTTGGACTTGCATAAGAACAGAGACGCCAGGTGTATATTAATCCTTCTGCAACTGCAGCTAGATCATCCTGTACAAGTTCACTTAGTTCAGAACAGAACTTTGGAATATCACTAGCAATCCTTTGCTCTGGGTTTGATATTCGATGATCCACATGTGAAATTTTGTAGTAAACCATATTCTGAAAATAATCAGCATGGACAAGATCTGTCAAAATTTTCTTGAAGCGCAGACTCAAAGACCCTGTTAAGTATTTTGAGGTCTGGTATACGGCGGATTGAAGAAAGCATAAGATTAGGTTTTCGATGATTAGGCGTGTAAAGGTTGGAACACGCCGAAGAAATGCTGCCCTAAACAAATAGCCTTGGACTCTTGCTAATCTATGTCCCACAGCAGTACGTAACACCGCAGTTAACGTCAAGCCAAGAAGGTAGCGGGTGCCATTTGGTCCAATCTTCTTCAGTAGGATGGCAGCAAGGAAATGAAGAGATCTGAGGCCACCTTTTCTTCGCTTTGTTCCGGCCAATCTACCATCCACACCATTTTGGCCCATCCTGTCCCCATTCCTGGCCAATGCAGTGGTGGCATCGTCACCCTCTGAACGCCTTCTCCGTTGGCCTTGGCTTGAGCGTGCATACGCCAAAGCTCCTCCGGCAAGCAGCGCGCCAGAAACAACCGCAAGAGTTTTCCTCCTTGAGGCCAAGAGTCCCCGGCCACGCTCCGTCAACTGCAGCAGCTGCAGGGATGGCATCTCGCTCACTGAAGATCTTATCTATAAAAACAGTAGATTGTCGAGCGCGGAATCAAGGCGCCGCCGCAAAGCATCATCGCCGCTGGATGTCGATCTCGGCGGAGGCAGGGCGGCGAGATAGATCGCCGGCGACGAGGAGGAGCATGCAGCAGCAGAAGCAGTAGATGCCGCGAAATTGGCACTGTCGCGCTAGTAAATAAATATACTCCGAAAGTAACAAATTTTGGGGGGGTTGATGAGATTTAAGGGAGGGAGATGTATGATAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0290900.1 | 5 | 421607 | T | G |
| Osa05LNT0290900.1 | 5 | 421731 | A | G |
| Osa05LNT0290900.1 | 5 | 421915 | C | A |
| Osa05LNT0290900.1 | 5 | 422472 | A | G |
| Osa05LNT0290900.1 | 5 | 422703 | G | A |
| Osa05LNT0290900.1 | 5 | 423359 | A | T |
| Osa05LNT0290900.1 | 5 | 424211 | C | A |
| Osa05LNT0290900.1 | 5 | 424343 | A | G |
| Osa05LNT0290900.1 | 5 | 424362 | A | G |
| Osa05LNT0290900.1 | 5 | 424842 | C | T |
| Osa05LNT0290900.1 | 5 | 425064 | C | A |
| Osa05LNT0290900.1 | 5 | 425248 | T | C |
| Osa05LNT0290900.1 | 5 | 427915 | G | A |
| Osa05LNT0290900.1 | 5 | 428005 | C | T |
| Osa05LNT0290900.1 | 5 | 428472 | A | G |
| Osa05LNT0290900.1 | 5 | 428835 | T | A |
| Osa05LNT0290900.1 | 5 | 429180 | G | A |
| Osa05LNT0290900.1 | 5 | 430783 | C | T |
| Osa05LNT0290900.1 | 5 | 430886 | A | C |
| Osa05LNT0290900.1 | 5 | 431117 | T | C |
| Osa05LNT0290900.1 | 5 | 431485 | A | G |
| Osa05LNT0290900.1 | 5 | 431547 | T | C |
| Osa05LNT0290900.1 | 5 | 431958 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0290900.1 | osa-miR5816 | Cleavage | 4.0 | 20.365 | 1 | 24 |
| Osa05LNT0290900.1 | osa-miR7692-3p | Translation | 4.5 | 8.829 | 1 | 24 |
| Osa05LNT0290900.1 | osa-miR395f | Cleavage | 5.0 | 13.365 | 1 | 21 |
| Osa05LNT0290900.1 | osa-miR159a.2 | Translation | 5.0 | 18.996 | 1 | 21 |
| Osa05LNT0290900.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 19.729 | 1 | 20 |
| Osa05LNT0290900.1 | osa-miR319b | Translation | 4.5 | 19.729 | 1 | 20 |
| Osa05LNT0290900.1 | osa-miR166g-5p | Cleavage | 5.0 | 9.613 | 1 | 21 |
| Osa05LNT0290900.1 | osa-miR1857-5p | Translation | 4.0 | 14.291 | 1 | 21 |
| Osa05LNT0290900.1 | osa-miR2928 | Translation | 5.0 | 11.211 | 1 | 20 |
| Osa05LNT0290900.1 | osa-miR2928 | Translation | 4.5 | 18.234 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0290900.1 | 5 | xa5 | Resistance or Tolerance | Bacterial blight resistance | nan | nan |
| Osa05LNT0290900.1 | 5 | CORN5 | Physiological trait | Source activity | C597 | R1838 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)