>Osa05LNT0292100.2

ATGCAACTTCGGCCATAGATAACAAATAAAATTGTCGTGTGCTATCTCAGCATACAAGTGGTGAGTTCAGTAAAATCCAATGGAGCTGTGTATCCTCGATTCGACCCTACAATTAAATAGGATAACCTTTTAAGGTTCCAACATGTCAGGTCCATTGTCAAGCTTCATAACAGAACACTTGAAGCAAGCACTACATATCATAATACGCAGCAAAAGCACATCAGCACGACTGCTACATACATATCCAACACTTGGAGAGGTCAGAATCAGGCCAGCAAAATTAACATCCATTGCGGGCAAACGACGTTCTTGTCTCGTCGCAGGGAAAATGGTCGTGCTCCACAACAAACTGAGCACCTAACCTGCCTGCCAACTCATGCACGCTTTAAGGTCTTCAGTAGTGTAAGTGCAGCAGTACCAAATAGCCTTCTGGTTCTGGATTGATAACTAGTACTTGTTAGTTGTGGTGGTTTTCCCAACAAACTAACGCCAACTGGAGAACACCATTTATCCTTCAATCCATTCTCAGTACCACCGGCCATATGAAGATTTGAAACATGATCACGCTCCATCATGTGTGCATAGAATGGGAATACTTTTACAGTATATCGAGATGTTAAAAGTGATCTCCAATGTGGGAAGAACATTTTCCTCGTTTGCTCAAGTTCTCGTCTACTTTGTATTTGCTTTCCAACAGCTTTTTTAGCTTTAACATTCAGATTAGGAGATTCTCCAACTGCCTTGGTCGTACCAGAATCTTCATAGTTGCACTTCGGCACACTATTCGACGCATTGCAGTCATAGGGACGGCATTCCAGGTCTCCTATGCTGATCCCTTTTCCAGTAGGAGCAAAACCATGATCATCGAGAATTGATGAAACACCCTCAAGCACCTCCTGATGAGAGACCTCTGAATGAGACTGGATATACTCATCAAGAGCTTCACCGGTTTTCGAAATTACAAAAATGAGCATCAATGAATTATGAAAAAATTTCCGCTTCTCCTCCAGCTGCTTATGTGCCTTGCTATTTTTACCACTTGTTAATCCACGCCCTTCCCTTTCTATGGAAACTATGGATCCCATAACACGATCCCTGATAATATCAAATCCATTCAGGTTACAGCTGATGTTTCTATTAGAGGAAGCACAGGTACGAATTTTTCGTTGAGCTGCAAGGAGCAAAATAGCAGCATGGACAAGCCTCCCCTCCTTGATGTAGTTCCATAGCTCATCAACAATATTATCTGTGTTATCTGCAAGCAGTCTTGTCGTGTCCAAGAAAATCTTCATCTCAGGCAGACAAAGCAGATGGATGAGCTTGTAGATGAAGTCAAGATCCACTTGCTTGAGCTTCCGGTCAGTTAATAGATTGTCCTCCAGATACTTGTGCATGCAAGTGTTCTCAATGGCAACATGGAGTGGGAGGAGGCCCTCGATGACCTTTTGGCCTGATGTGCGTAAATTCGCCGATGCACCATAACAAAGCAGCAACTTAATCATGTCAACTGAGAATTTTTCAGCAGCTTTGTGGAGGGGGAAGTACCCATAGCTAGTCATGTAGTTGGGGTTGGCACGGATCTGACAAAGCTTAGGTGCCTTGCCCTCCAAGACAACCTTAGCACAACGCAGGGCATTGAATGAAACAATGAAGTCCATTGTTTGAGATGTGATGACCAGACCCCAACCCATGATACGCATATTTCTTCTGTACAAGTTGAGGAATCTCCGAACACTGTCCTTTTCAAGGATGTCCGCCAGTTCACTGCATATTTCAGCAAATTTACGGCGCACCTCCTGAGGAGTACGGTCTGGGGCAATTATATTTGTGGCCCTGGAAGCAGCAAGTACGGCCAGTACTTGAAAATGATGCTGTTTGACCATTTCCACTTGGCTCATAAGGCTTGCTGTGGGTGGCAAAGTAGGACAAGGAGGATGCGGAGGGTCCCATGGGTCCCACTCAACTGTGTCCGATGACTTTGATCCATCTGAGCCTTCACTATTCTCTCCGGAAAGCATAGATTTCACAGCATCAGTTTTGTCGGTTGTTTGCATTGGCATTGACTGCAACGAAAAACAAGTAAAATGGAATTACAAGACCAAACCAAT

Explanation	CPC Score
noncoding	-1.14924

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0292100.2	5	1349221	C	G
Osa05LNT0292100.2	5	1350604	G	A
Osa05LNT0292100.2	5	1349168	T	C
Osa05LNT0292100.2	5	1350871	A	G
Osa05LNT0292100.2	5	1351121	G	A
Osa05LNT0292100.2	5	1351848	G	A
Osa05LNT0292100.2	5	1352078	A	C
Osa05LNT0292100.2	5	1352171	A	G
Osa05LNT0292100.2	5	1352501	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0292100.2	osa-miR5538	Translation	3.5	22.1	1	22
Osa05LNT0292100.2	osa-miR396c-3p	Cleavage	4.0	10.564	1	21
Osa05LNT0292100.2	osa-miR1866-3p	Cleavage	5.0	16.79	1	22
Osa05LNT0292100.2	osa-miR1883a	Cleavage	3.5	24.825	1	24
Osa05LNT0292100.2	osa-miR1883b	Cleavage	3.5	24.825	1	24
Osa05LNT0292100.2	osa-miR2864.1	Translation	3.0	17.635	1	21
Osa05LNT0292100.2	osa-miR5339	Cleavage	4.5	17.519	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0292100.2	5	f5-Du	Physiological trait	Sterility	nan	nan
Osa05LNT0292100.2	5	S31	Physiological trait	Sterility	nan	nan
Osa05LNT0292100.2	5	CORN5	Physiological trait	Source activity	C597	R1838

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus