© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0293200.1
GAAATTTCAGAGCTGTATAAATCTCATTGATCAGTCAAATGAACTGTCCCTAAAAGTAGCGGCAACGCTGCAAACATTGCAGCCTGCCAACGTAGCACTTCAGTCATGAAAACAACAACGTGTAAAGCATATATCCATTTCATGGGATGAAGTACTGGCTGAATGCTGATGTATCTCCAAGACTCCAACATCATTATATTTCTTATATTTATATAGTGTTGTGTCTCGTGATGGATCCTTCTCCACAAATGGTTGAGGGGGTAGCCAGTTCAGATCTTTGGAAGAGACTCAGCGGCTATAGTACTGTTTGAGATCCTATCCAGCTCTGAAACATTTGTGCTATTGGACATGTCTATCACCTATATCCCTAATTGTCTGCTGGAACTGCGGGTACCTGGTTAACTGTACAAGTCACAGCTGCTTGTGCACCATGACTATGGCCCAGTGGAAATGGATACCGGGCTGGATCTCGAAATCCCCTTGGTTGTGGCAATGGTAGCTGTCTGACTGTTAATCCTAGAACTGGAGGTTGTATCTGATGTAATTTCCAGGTTTGAGCCTGGAGCTTCTTGAGACGAATTTGATGCTCTTTTCAAGGATTTCTGCGCTTCCTCTTCATCGTCATCAGATGTCGACTCTTCATCTGAACCACTCATCTCTGTGTCAGATTTATGATGAATCAGACGAGCAGCATGCCAGCACCGTCCATTTGCCTGTGAAAGAGGTACAGTCCAACCTTTCTCCAGGCACCAATCAAGAGCAGGCCTGATGTCCTTGCAGTAAGCAGTATAACTCCCCCCTTCACCTATAGGAGGTTTCAACAGCTGTACCTTAACCATATCTTCACTAAGTAACTTAGTAACTTTCGCAGTCCAGTAAGAACCTTCAGACAACCACTCAACCAGATCACCTACTTTCGGGGTATCACAAACAGATACTATCACATTACTCTTTGGAAATTGCTCGGGAACTTGATCCCCCCAATACAACTCAGGATAGGAAGGACGAAGCATGCATTCTCTTTCTCTAACCACATTTGAGTTCCTTTTGCCATACGCTGGGTTCTTTTCAAAGACTTCAGTCCATGTTTTCTCTTCGTCTGGGTAATCAAGATACTCCAGTAAATACTGAAAGGACCCTGTTTCTGTGACACGCATATCATTAATCTTACAGCGAAACCAAGCACATTTGTAACCATCGATGAAGGACTTTGACTCCGCGAAATCGCCCTTTTTAAATGGAAGAATCAGATCCATGCCCAACCACCAATCTTCGATTGTGCGAGAGGATGATCGATGGCGACGGATTTTCGGGGAGGTGGCGGCGCCGGCGGCCGGCGGCTAGGGTTCCGGCTGTGCCACGAGGATGCTGGCCGCCCCCGCCCTCGCCGGCGGCAGCTGCAGCGGAAGAAGGAAAAACAGAGAAGGAAAAGAGAGAGGGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0293200.1 | 5 | 2335012 | A | T |
| Osa05LNT0293200.1 | 5 | 2335172 | G | A |
| Osa05LNT0293200.1 | 5 | 2335232 | C | T |
| Osa05LNT0293200.1 | 5 | 2335920 | G | A |
| Osa05LNT0293200.1 | 5 | 2336265 | G | T |
| Osa05LNT0293200.1 | 5 | 2336603 | T | C |
| Osa05LNT0293200.1 | 5 | 2336809 | T | C |
| Osa05LNT0293200.1 | 5 | 2336863 | C | T |
| Osa05LNT0293200.1 | 5 | 2337766 | T | C |
| Osa05LNT0293200.1 | 5 | 2338442 | C | T |
| Osa05LNT0293200.1 | 5 | 2338755 | A | G |
| Osa05LNT0293200.1 | 5 | 2338918 | T | C |
| Osa05LNT0293200.1 | 5 | 2338991 | T | C |
| Osa05LNT0293200.1 | 5 | 2339617 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0293200.1 | osa-miR5797 | Cleavage | 4.5 | 11.687 | 1 | 21 |
| Osa05LNT0293200.1 | osa-miR395c | Cleavage | 5.0 | 15.733 | 1 | 21 |
| Osa05LNT0293200.1 | osa-miR164c | Translation | 4.5 | 17.527 | 1 | 21 |
| Osa05LNT0293200.1 | osa-miR395o | Cleavage | 5.0 | 15.733 | 1 | 21 |
| Osa05LNT0293200.1 | osa-miR2878-3p | Cleavage | 5.0 | 16.226 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0293200.1 | 5 | nan | Morphological trait | Root | RZ556 | RG313 |
| Osa05LNT0293200.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | RG313 | RZ556 |
| Osa05LNT0293200.1 | 5 | Ph5-1 | Morphological trait | Dwarf | RG313 | RZ556 |
| Osa05LNT0293200.1 | 5 | CORN5 | Physiological trait | Source activity | C597 | R1838 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)