© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0294400.1
GCTGAAGCAACAACAATTCATAATTTAGGTCAAAAAAGTAGAAGTGACAAAGCTCAGCTCCAGATACAAATTTTCCACTAGTACAGTACAAATGGATGCCATATTTTTATACATACAAAGTGCTAAACACGCTAAGAAAACAAACCGAAGTTTTCTCATGATGCTATCTAGTAGTTTTCTGTAATTCATCCAGTCTCCTCCTACAGTTATTAACACCTGAAAAAGGCTGTGAATTTTCATTCTACACCTGCAACAGTTTTGTAGCCGAGTAGAGATCATGACAAGTCTATCCAACCATCAGCCTTTCTACTTGGAAGGAAACAATTCTATGTTATGCGAGGAAGGTGTTTGAAGGTACTAATCGAGATTGAAAATAAATACCTCCATAACACCCGCATACCGATACCGCACATACTGCCCCCTACACAATCTGGACGCAGGCTGGTGTGTCGGACCTTGGACCTGCGATCGTCCGGTAGACGTACAGTTTCTCAACAGGTGTTTCATCCGGAAGCGAATCCAAGGGGCATGACCTTCCAGGATCGTTCATGATCTCCACACTAAGGCGGGGCATCTTGCGTGCAAGCTGTCGGCATGCGCCCAGGGTCAACAAGCACGACGACATCCAAAGGGATCGCATTGTCTCCAGCTTTGCTGCGTTCGCCAGCAATGGCTTATCACCAAATGGGCAGTCCCTGATCTCCAGTTTCTTCAGGCTCTTGCAGCCTGAGAGGATGTAATGCAGGCCCAAGTCGCTGTTCCCAGCGAAGGCGATTGAAAGCATCTCAAGACGATCAGCATGTGCCCCAATGGATTTAAACACAAGATCTGTGAGAAGGCCTGAGATAGAGAGACGCCTAAGGCCCCTGCATGACTCCACAATGGCGCTGAAACCTGCATCAAGAGGCTCCCGTGTGATGTAGTCTGGAGTGTGTGGCTCAAGGATGCATAGGCGGAAGCAAGTGAAGTTGGGACGGTTCTTTGCAATGGTAATAAGTGCCTCATTTGTCATCCGTCTGCAGAAGTAGAGCACTGACTCCAACATTGGACAACTTGCAGAGACATCAACAAGACCTCTTTCAGTCAAGAATCCTGCACCAAAAGGGTCAGAAGGGAAGACCCGCAACTCTTGAAGTTTATTGCAAGATGATGCCACAACAGCTAAACCATGATCCTCAATGAGGTCCATCACCCATAATTGTTGCAAATTTCTGCATCTACTAATGAATTTGATGAGCTCAGGACCTCGCACAGTAGCATAACTCAGATTAAGTGATGTGAGGCCTTCACATACACAATAGAATGCTGGCAGATAATCTGGAACAGCATCCCAAGCCCCAGAAAGCCTTCTCAAGCTTTTACAACCTCCAAACGCCGCCTCCAGCTTTGCAAACAGATCGGAATGGTAATCAGCAGAGAATTTGCCAGTTCCGAGTTCAACTAGCTGAGGAGCCTTATGAAGGAGGCTAGCAAGCTTGTCAAGGGGGATAGCATTGTTGAGCTTAAGAGTCTTCAGGTTGTGACATCTGGTCACTAACCGTTCAAGTACAGTGATATTGACCTCCCCCTCTAAGCATGAAAAGTTTAGAGTTACTAGAGAAGTGAACGATTCCGGGAAGAGGCTGAGCCAATGAATAGAACAATCCTCAATCTCGTTCTCTTGCAGGTCAAGTTCTCTTAGGTGTCTGCAATATTAGACAAAATCAGAAGTTGAAGAAATGTGCATGGTGACTCATATCTTAAAAGAAGAATGAAACTGTAAGGATAGCATATAGCCATTAACCAATGTTATCACTTGTGAAACAAAGCCCATATGAGTATATGGTGGAAAAGGCAAGGTAAATGAGAATCCACTCAAACAAACAGAAGCAAACTTTGACTACTGCATTCAACAACCATGGCAAACATAACTGGAACATATCATAAGACTAAAACAATGAACACGTAGGGTTTACTATCATTTCACAGGGACTTGATTTCATGTGTGAGCTATACTAGCATTCCCCACTTTCAATTACACTATGCGAACTCAGCTTATAATGAATGGTATTGTATTTGTTTAGTAGATAATGATTATACTCCCTTTGGTCTCAAATACTTCTCACTGTATGCTATTCACCTTTTTACCTTTGATCGCTTGTCCTTTTTACAAAAAAAGTTATGTATGCTTAAAAGTATGCCATGTTAGAAATGTGTGTCATGCCATAAATACAACCGCACAACTTTCATTAATACTAAATTAATCATATAAAAGTTAATAATGGTCAAAATTAAAACATTGATGATCAACAGTGAAGTAAATGATAGCGAGTATCATATGTTAGCAGTGAATATAAACCAATGGATAAAATCGGTGTAGGGATCAAAATCAACTAAATAAATGGAGTCCAGCAGCCTCTGAAAGTTGAAAAGACCTATTTTTTTACCACGTATCATGAATCAGCATGAGCAATATTACCTAGATAAATAGATTAATCATGGTGGTTTAAAAAATAAGGTGAAGGAAAGCAACATCAACAATTGGAAAGCAAACCATTCATGAAAATTTTCTTATACCCTATTATTCAAAAGGTATTAAGAAAGGCAACACGTGAAACACACTTTTAGTTGACACAAAATACCTGCCTACTCTAAAGCAAAAAAAGGAGATAGCAACAACAATAATTGTCAGTTGCAGATAACACAGCACATCAGTTGTCTAATGTATCACGTATGGCTAGGGCAAGTTTGAACTTTTTAAGTTGACACTTCCAGTATTTTAGACTACTCCTTGTAAAGAATCAAATCATCAAAATCTAGCATCTTGTTAAGAAGGAACCATCTAAAACAACAAGGTGTACCCTATCCATAATCAAGTCAAATTTCTGAGTGGACAGTGTAAACCGACATCCTCATAATCATTGTTTTAACAAAAAAAAAAGGTTTTATTTGCAGCTAGGGCACCAATGTGCTGCCCACTACTACATACTCTGTCCATTCAAAATTCAAAACATTTGACGTTGGGAGAAATAAACACAGTTCTCTCAAAGTCAAATAAATTTGACTGGAGAGAGAAATTCTTAAGGTAATTCAAAGCATGCTCAATCAATGGATATAAGTAGCAACAGTAACAACAAGGATAAGAATCACACAAGAAAAGTTTGTACTTAGAAGATAGTATTTCGATATAGCTAAGATTCATCAATGTTAACTACCATCTGCACCCAGAGCTACAAGTGTAGATCCTTGTAATTGAAATAAATGTAACGCTGAGTTTACATGCATAACAGTGTTAACAAAAAAGTAGCAAGAACTAAAAAATGATTCTGGCTCAATAACAGAGTAAATGTATGAAAATAGTTTTGCTAAAATCCTGCTTCCATTGTAAATTTTGAATGCTCTAAAATGTAGTCTCCAATCTAGAGTCAAAATATTTTGAATCAAAACTTAAATACATCTGGATTTATCAAACAAGTGAATGTACCAGTAGCCCTCTAGTCTAGCATAAAAACTAGTATCTATGCTAAGTTCTCAACCATCAGCAAGTACACATGTGGTGCTCAGGCTCATTTCGTCCTAATATCCAAGAATATGGCCTTATACGATCACCGAACCAAATTTAGTTATCTCACAACCTATTCTAATCTGCCTGTTTGAAGTGTACAGTAGTTAAACTTCACAGTTCAACTGTTTCGAGTTCCTCAAAATGATGCAAATGATACTGCTTTGGCATATTAAACTACTACTAATGGATGAATCAGGATCGAAACTCCCACTATTAGATCCTTCTATCTGGTTTAGGATATAAATTCCCCAATGATAGGAATCCCACACATTCCTAATTCTTTTCTGGGGGGAGTCCAGAAGATACTCGCAAGAACAAATCTGTTTGTTTTAACTGTCCATTACATGAGGACATCACAAATATTGGAGCAAAAATCACTTTCCCTCACCAAAAGCAAGATAAAAGGTAGTAGATTCTTGAGCACAAAAGGAGGGGGAGGGGATAAACTGGGAATCTACATGACAAAAACATGCTTAAAAGACCTGGTTCTTTAGAATCTGGAAGTTCAAATCAGGATAGGAACTCAACAAATTCACTTAAATATCAGGAAAATATAAAGGAAAACAGTTCAACTCAGATCTAGTAACTCATGATGGGAAGAATACATTCTTTTAAAAAAGCCCAAAATTATAAAGGCGCATCACCAGTTGTTTGTAAACTTGAAATATCCCATTCTTTTGGGTAAAAAGCACAAAAAGAAACAAAGAGATGGATCCATCATTGCTTAAACAGGTAGAAATATTTCTTCTGTCAATCACACAGATCCGTGCAAGAGAATCACATCTTCGCAAACCAGGCACTCAAATACAAGTCAAAGCTTCCTAGGAACAAATCATAGCTAAGATTTAAAGAAGACGTGAGCATCACTCAATTCACTCTGTTACTTAACTCCTAATAAAATGTACAAATCACAGCAGAATTTTCATGGGAATCATTCCTTTGACATTAACACGTTATAAGCATCTAAAATACTGTCACAAGAAGACTTCTTGGTCTTCAACTTAGGAAACACCAAAAGTAAATCCAGATCATACACAAGTAAACAGAAAAAAAAACTGTCCCTTTGCAAATTAAACACCAAGAATAGATCAAATCTTAGCAGAAAGCCACATCTACTTCCACATACTACTCAATGAAGTTCAAAACAAAGTTAATATAGGAATCATGGAAGAACAAATCACTTCAGCTAGACCATGAACTCACTAAAGAACACTGTGAAGAAAGAAATGGCACCAAGAAATCTGTCATGTTTTAGCTAAAAAGAAGACGAATCAAAGCTTGGGCCGTGAAAGATTCCTCTCAAATCCAAGAACAACCCAAAGATCCCATGCTTATTTAGCTAAAAAGATTTGACCCAAACAACACTCTCCACCTCACCTGCAACCGGCAGCAATGGCGGCGAGGCCCGCGGTGCTGAAGCCGTCGCAGGAGACGAGGCGGAGCACCTGGAAGTTCCTGAAGGACGCGGCGATCATCTCGAGGCACTCGTCGGTGACGACCATGCGCTTGAAGCTGAGCTCCTCGAGCAGCGGCCACCCGTCGGCGGCGGCGGCGATCCACGGCGCCGCGGCGGCGCCCCAGGCGGGGGGGACGAGGCCGAAGTCGGCGAAGTGGGGCTTGCCCTTGACCTCGGCGGCGCGCACGGACGGGAACCGCTCGACGGCGTCCCGCGGCGCGGCGGCGTAGCAGTTGGCGACGGCGAGGCGGCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0294400.1 | 5 | 2898652 | A | G |
| Osa05LNT0294400.1 | 5 | 2894565 | C | T |
| Osa05LNT0294400.1 | 5 | 2895375 | T | G |
| Osa05LNT0294400.1 | 5 | 2895844 | T | C |
| Osa05LNT0294400.1 | 5 | 2896275 | T | A |
| Osa05LNT0294400.1 | 5 | 2897079 | C | G |
| Osa05LNT0294400.1 | 5 | 2897587 | A | C |
| Osa05LNT0294400.1 | 5 | 2895226 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0294400.1 | osa-miR5537 | Cleavage | 5.0 | 13.176 | 1 | 22 |
| Osa05LNT0294400.1 | osa-miR5543 | Translation | 3.5 | 13.953 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR5789 | Translation | 3.5 | 10.472 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR6248 | Translation | 4.0 | 11.657 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR166a-5p | Translation | 4.0 | 13.823 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR166d-5p | Translation | 4.5 | 13.823 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR166e-5p | Translation | 4.0 | 13.823 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR395f | Cleavage | 5.0 | 14.489 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR319a-3p | Cleavage | 4.0 | 23.528 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR160f-3p | Cleavage | 5.0 | 18.93 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR166k-5p | Cleavage | 4.5 | 12.337 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR171h | Translation | 5.0 | 11.502 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR393b-3p | Cleavage | 2.5 | 17.876 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR413 | Cleavage | 4.0 | 23.147 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR435 | Translation | 4.5 | 19.092 | 1 | 20 |
| Osa05LNT0294400.1 | osa-miR440 | Translation | 3.5 | 24.256 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR529a | Cleavage | 4.5 | 21.466 | 1 | 20 |
| Osa05LNT0294400.1 | osa-miR1429-3p | Cleavage | 4.0 | 14.826 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR1435 | Translation | 4.5 | 11.661 | 1 | 20 |
| Osa05LNT0294400.1 | osa-miR1850.2 | Translation | 3.5 | 13.211 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR1850.2 | Cleavage | 4.5 | 15.942 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR1853-5p | Translation | 4.0 | 13.875 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR1876 | Cleavage | 5.0 | 12.277 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR1876 | Cleavage | 4.5 | 9.921 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR1883a | Translation | 5.0 | 14.995 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR1883b | Translation | 5.0 | 14.995 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR2122 | Translation | 5.0 | 14.113 | 1 | 22 |
| Osa05LNT0294400.1 | osa-miR2876-3p | Translation | 3.0 | 11.353 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR2876-3p | Translation | 5.0 | 14.508 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR2931 | Cleavage | 4.5 | 12.049 | 1 | 20 |
| Osa05LNT0294400.1 | osa-miR812k | Cleavage | 5.0 | 9.974 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR812l | Cleavage | 5.0 | 9.974 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR812m | Cleavage | 5.0 | 9.974 | 1 | 24 |
| Osa05LNT0294400.1 | osa-miR5492 | Cleavage | 5.0 | 10.095 | 1 | 21 |
| Osa05LNT0294400.1 | osa-miR5508 | Cleavage | 3.5 | 16.028 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0294400.1 | 5 | CORN5 | Physiological trait | Source activity | C597 | R1838 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)