© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0026300.1
CCCAATATATAACACGGGAGAAGCCCTACGCCCCTACGCCCGTACCTGCCTCTCCCTCCTGCAAACGGAGGTGGCGCCGCGCGGCGGCGGGATCGGTCTTCCCGATCGCCGGGGGGCCAAGCCGCCAAGGGGAGTTCACCGCGCGCTTCATCCACGCGCCCAACACTCAGCACTGATACGGAGTAATCAAGCTGACGAGGGAAGATGCCGTTGAGACAAATCTTGGATTGCATTGAATTCATTCAGATCAAACGAAATCTCTCCTGCACCATCTCTTGCTAAGCATAGCACTGCCTTATTTCACAATTACTTCCTCTGTCCCAAAATAAGTGCAATTTTAGCACTATTCATGCTAAGTGCAGTTTTAGCACTATTTAAGTTCAACGTTTGACCATTCGTCTTATTTAAAAAAAGATTATGATTAATATTTTTATTGTTATTAGATGATAAAACATGAATAGTACTTCATGTGTGACTAATTTTTTTAATATTTTTTATATTTTTTTTCAAATAAGACGGATGGTCAAAGTGCTAAACACAAATATCTATGGTTGCACTTATTTTGGGACTTATTTTGGGACGGAGGTAGTTAGAGCTGCAAATTCTTGGCGTTTTATTTGTGGACAATGCGCTGTATCTTTACTGCGATGGAACCCTTAGCCATTTGTGCTACTCAACTTCTTCTTTTGAGCGAATTGCATGCCATTCCATCTGCTTGCAGATCACTAGTCATCTGCTGCTGTCTGCTTCCATGGTTAAGTAGGCATAGTGTTAACAAGATCAAGACGTATGATAAAGTTCAGTAAGACACCTCCTTTCATCTTCAACTCAATTAGAAAGTACTAAATTTGACTGCTCCAAGGAGATATTGATGGGTGTGTATAAACATTGCTCGTTTAAAAAATTAACATTTTTGAATCTCTCATTGATAAAGAATGTACCACTCCCAGCACATATTTTACAAATTAGTGTACAGATGTTTAATTCCAACTATAAAGGAAAGGAAGAGAACAAACCACCAAAATTTACAAGACCACTACAACAAACATTTCGAACTTTTTTTTCATGTTCTACACCGATATGCACAAATTAATTCGTATATGCAAATCAATCGATCTAATTCCTAGTTTAGGACCTGTTTCCTAGTCCCTATCAATCACTATCTCTTCTGGAAGTTGAGCTTCATGATGGCAAAGCCAAACAGGAAGGCAAATAACATGGTGAATGCGACGATCACCACAGCCACGAAACCCAGCCAGCTGTGCTTAAAGTCAAAATAGTTCTCCACGAAGACATTCACGGGTATGCCATCATCCATCGGCGTCACGATATCTCCATATTGCGAGACAATCAGCCCGTATAGTGTCCATGCTACAGGGCATATCCAGCAGTACCATCTCCACCAGACTGGAGTTGCCTGAGCACACGGTCCAGGGAAAATGGAATTGAGCTATAGAAATGATGAAACAAAATTAAATGCAGGGGCCATAAGGATGGTGGTGGTTACCGGTCTGGAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGGAGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAGCCATCATGCCGTAGAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCACTGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAGTGTGTACGGGAATTCAATGGCAACCTGCAAGGGAGAAGTTGATAACTGTCAGGTTTCTCAGCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGAGAGCTATGTACCTGCCCAAATGCATACGGGAGAGCTGAATACATCCCAGCAGCTCTTTCACGGTAAAAGACTGTCCTCTCCACTGATACCACTGGCTGAACTGACTGACCGTTTAGCACGCCAATAAACAGCACTGCAGCATACATTGACCCCATGGCGTTGAACAAGTCTTGTGACTGGCCCCTGGATCAAGAAGCCAAAGACGCGTAAATTACATTTTGAAGATGGTTTAGTCATACGCCATATATGTCTACATGGTAAGTGCATACATTTTACCACCAAGGTCCCAGAAGATGGTACCGAAGATGAGAGCTATGACAGTAGTGAAAAATAGTCTTATGGCATTGTAAGGAGGATTCCTCCAGTATGACAGGTGCTGCTTCCACAGGCATGCCAGGCATTGAATTAAGAAAGACTGTGAGTACTGTGTAGGAAAATATAGTTCACTTGAACCTGGCGGTGGTGTGCTCAGTTCCTGTATCAATGCCTTGTTCCTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0026300.1 | 1 | 24046781 | T | C |
| Osa01LNT0026300.1 | 1 | 24046766 | T | C |
| Osa01LNT0026300.1 | 1 | 24046859 | G | A |
| Osa01LNT0026300.1 | 1 | 24046719 | G | A |
| Osa01LNT0026300.1 | 1 | 24046730 | G | A |
| Osa01LNT0026300.1 | 1 | 24046837 | T | C |
| Osa01LNT0026300.1 | 1 | 24046840 | A | G |
| Osa01LNT0026300.1 | 1 | 24046921 | T | C |
| Osa01LNT0026300.1 | 1 | 24046930 | T | C |
| Osa01LNT0026300.1 | 1 | 24046936 | C | T |
| Osa01LNT0026300.1 | 1 | 24046938 | A | G |
| Osa01LNT0026300.1 | 1 | 24047279 | A | G |
| Osa01LNT0026300.1 | 1 | 24047474 | C | T |
| Osa01LNT0026300.1 | 1 | 24047745 | G | T |
| Osa01LNT0026300.1 | 1 | 24048442 | T | C |
| Osa01LNT0026300.1 | 1 | 24046863 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0026300.1 | osa-miR5544 | Cleavage | 4.0 | 8.394 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812s | Translation | 3.5 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR5799 | Translation | 2.0 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812v | Cleavage | 5.0 | 21.445 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR5811 | Cleavage | 3.0 | 13.365 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR6248 | Cleavage | 5.0 | 13.103 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR6248 | Translation | 4.0 | 18.51 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR6248 | Cleavage | 5.0 | 8.394 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR398a | Cleavage | 4.5 | 22.43 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR166i-5p | Translation | 4.0 | 15.424 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR395w | Translation | 5.0 | 24.427 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812a | Cleavage | 2.5 | 10.316 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812b | Cleavage | 2.5 | 10.316 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812c | Cleavage | 2.5 | 10.316 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812d | Cleavage | 2.5 | 10.316 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812e | Cleavage | 2.5 | 10.316 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR1436 | Cleavage | 5.0 | 13.05 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR1439 | Cleavage | 3.5 | 9.87 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR1861d | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR1861h | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR1861j | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.1 | osa-miR812f | Cleavage | 4.5 | 10.553 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR1871 | Translation | 4.0 | 18.304 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812g | Translation | 4.0 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812h | Translation | 4.0 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812i | Translation | 4.0 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812j | Translation | 4.0 | 10.041 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR2093-5p | Cleavage | 4.5 | 15.544 | 1 | 20 |
| Osa01LNT0026300.1 | osa-miR812k | Cleavage | 4.5 | 10.553 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812l | Cleavage | 4.5 | 10.553 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812m | Cleavage | 4.5 | 10.553 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812n-5p | Cleavage | 4.5 | 15.416 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR812o-3p | Cleavage | 3.5 | 10.939 | 1 | 24 |
| Osa01LNT0026300.1 | osa-miR5509 | Cleavage | 5.0 | 18.017 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR5522 | Cleavage | 5.0 | 20.178 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR6248 | Translation | 5.0 | 10.14 | 1 | 21 |
| Osa01LNT0026300.1 | osa-miR5337b | Translation | 4.5 | 14.698 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0026300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0026300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0026300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0026300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0026300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0026300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0026300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0026300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0026300.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0026300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)