© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0026300.2
CCCAATATATAACACGGGAGAAGCCCTACGCCCCTACGCCCGTACCTGCCTCTCCCTCCTGCAAACGGAGGTGGCGCCGCGCGGCGGCGGGATCGGTCTTCCCGATCGCCGGGGGGCCAAGCCGCCAAGGGGAGTTCACCGCGCGCTTCATCCACGCGCCCAAGGGCCATAAGGATGGTGGTGGTTACCGGTCTGGAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGGAGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAGCCATCATGCCGTAGAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCACTGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAGTGTGTACGGGAATTCAATGGCAACCTGCAAGGGAGAAGTTGATAACTGTCAGGTTTCTCAGCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGAGAGCTATGTACCTGCCCAAATGCATACGGGAGAGCTGAATACATCCCAGCAGCTCTTTCACGGTAAAAGACTGTCCTCTCCACTGATACCACTGGCTGAACTGACTGACCGTTTAGCACGCCAATAAACAGCACTGCAGCATACATTGACCCCATGGCGTTGAACAAGTCTTGTGACTGGCCCCTGGATCAAGAAGCCAAAGACGCGTAAATTACATTTTGAAGATGGTTTAGTCATACGCCATATATGTCTACATGGTAAGTGCATACATTTTACCACCAAGGTCCCAGAAGATGGTACCGAAGATGAGAGCTATGACAGTAGTGAAAAATAGTCTTATGGCATTGTAAGGAGGATTCCTCCAGTATGACAGGTGCTGCTTCCACAGGCATGCCAGGCATTGAATTAAGAAAGACTGTGAGTACTGTGTAGGAAAATATAGTTCACTTGAACCTGGCGGTGGTGTGCTCAGTTCCTGTATCAATGCCTTGTTCCTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0026300.2 | 1 | 24046859 | G | A |
| Osa01LNT0026300.2 | 1 | 24046719 | G | A |
| Osa01LNT0026300.2 | 1 | 24046730 | G | A |
| Osa01LNT0026300.2 | 1 | 24046837 | T | C |
| Osa01LNT0026300.2 | 1 | 24046840 | A | G |
| Osa01LNT0026300.2 | 1 | 24046921 | T | C |
| Osa01LNT0026300.2 | 1 | 24046930 | T | C |
| Osa01LNT0026300.2 | 1 | 24046936 | C | T |
| Osa01LNT0026300.2 | 1 | 24046938 | A | G |
| Osa01LNT0026300.2 | 1 | 24047279 | A | G |
| Osa01LNT0026300.2 | 1 | 24047474 | C | T |
| Osa01LNT0026300.2 | 1 | 24047745 | G | T |
| Osa01LNT0026300.2 | 1 | 24048442 | T | C |
| Osa01LNT0026300.2 | 1 | 24046781 | T | C |
| Osa01LNT0026300.2 | 1 | 24046863 | T | A |
| Osa01LNT0026300.2 | 1 | 24046766 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0026300.2 | osa-miR1861d | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.2 | osa-miR1861h | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.2 | osa-miR1861j | Translation | 4.5 | 21.427 | 1 | 22 |
| Osa01LNT0026300.2 | osa-miR1871 | Translation | 4.0 | 18.304 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0026300.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0026300.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0026300.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0026300.2 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0026300.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026300.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026300.2 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0026300.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0026300.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0026300.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0026300.2 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0026300.2 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)