© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0026600.1
AAGGTAAGTTAGGGTCTCCGATTGGAGCATTTAATCAAATAGAATTAAAAACATATTTAGTTGTCGCCTCATGTACAAATTGGAAAGCATGCCGATAAAATAAAGATATGATGCGTTCTTCTATTGGATTAGAAGAAACAATGTACTGCTCTATATTGTTAATGTAGAAATGGTCGTTGATATAGGCCCCAAGATTCTTTTTCCCTGGGGTTTGTGCTAGGGTAGTTGCTGTTTATGTAGGCAGGCACCTATCGCTGGCTCCGAAGGCAAAACCCCTCTTTGCCTGTATGACGAGCATTATTTTGTGAATGCTAATTCACAAACCAAAGCGATATGATCACTTCCCCATTTCTTGGTAGGGAACCCAATTGTTTGTTTCAGAATTTCTTTTGGGAAGGTATCTAGCACTTGAACAGTCTGCAGATCTTCGGAAGCCCATATGTAGTCCACTGTTCCCATAAATTTTCTGTTGTAACTTGTTACTAGAGGCTCCTTGTTGGCATCTTTTGTCCCTTCAAAATCCTCCACATCTGTGTAGACACTTCGGACTTTCAAATTATGTTCCACGAAGGTGCAATCTTCATTCCCAGTAGCAGCTTTAATTTCATCTGGTGTCCACCTGTATGGATCATAATCGTAATATCTTTTATCAGAAGTAATCACTTGCTGGGCAGATGGTGAACCATCTGAGGTTGTTTGCAGCTGGTCTTCATCTTCAAGTAAAAATTCATTAACACCAGAAAACTCTTTAAAGATGGAAGGATCTGCATTCACATCTGAGCACAAAACTTCATTGGATGCCCCATCATCCTCAAAAGCACAAGAACAATTTCCAAGCTCATTTGAACATGAATGCGATTTTGAAAGCCTGTTTATCACTTCAGGTGTACATTGAACATCACAAGTGTCAGAAAAGGCACAATCTGTGTGTTGCAAAGGCTCTAGTGGTGATGTTAACTGAGTTGGCTCAGTATTGTTTTCTTCTTCTAGCCTCAGATTACTCATTTGATGAAGTGTATCAGCAAACTTCAGGGGATCACTGAAACAATTTGATTTTGATTCACTACGCATGCAATTATTTTGAGTAGACAAAGGTTCACTGTCTTGTTCCTTTTCATCGGGTCTGACCTTTGATATATCAAACAGTGTATCTGACTGGACATTGTTTCGCTCAAAATCACAAGTAGCTTTTCCAGAAATCACATGACCAGGAAAGTTTGCCAGGGTATTTGAACTGTTATTGCTACCACCAGCTAATTCTTCCCAAGAATCTTTAGATTCAGATGATTCATAAGATGGAAGAAGCTGACTTCTATCAACTATTTCACTCGAATCTGACTGAAGGGTCTCATCATTTACTGTCGTTGAAGCAGACGAAAAGTTTGTAACGTTAGTTTCTTCTACAGAGCTCTTTTTTATTACTCCATATCCTTCACTGGAGTTGTTAACCACTGAAGTTTCTTCACCATTAGTGGTGTTGGTATGTGCTTCAGCATCAGATGTATAGGCTTCCTTTGTAGGACCTTTCACACAGCCCATTAATTCTTGCTCGTGAGGATTTGTAGAGCTCTCTGGGTTTAAGAAAGAGTCTGAAGCAGTATCAGTCAAAGTTGGTTCTCTGCCAGAAAGACGAGAATTTTCCGTTACATTTCTTGCTTCAGGTTGAGGCTTATGATCATTTGGGTAACTTATGCTACCCTCCTTACTATTCGTCGTGTGAAAAGGCGGATAGAATCGAGCTGTGTTAGGACCAGTATATAGTCCCTGTGCAGTACTAGTTTGCTGCCCTGATATATTACTCTTCACAAGACCGGACAGATTCAACTTTTGCTCCAGCATAAAATTGTACAGAGGGCTCTTGGGTGTAGAGTTGAAATCTCCACAAATTATTACTGGAGCATCATTCCATGTCTTTGATAGAGCATACACTCGATCAAGAAGCGTCCTTACCTGACCAAGTTTGATGTCCCCTCTCTTTGGATTGTAAAGAACATGAGTATTGCATACAATAATTTGCTTAGCTTGTTGAGGATGGTTAGGGCTAGACTCAGTTTGCACATTTCCTGGAATCACCGACTCTAAAACACAAATCTGTGCAACATTATCACGGAGATCAATCTTATTGAACTCGATATCCTCTTGATAGCGCAACTGAAACCTAGCTGTTCGCCAAAAGATCGCACATCCATCAGTGGCATTTCCAGTCCGCATCTTCCATATGCCATTATATCCTCGAGTTGCCATTTCTTGCTCAAGGTCTGTAAATTTGTCAACCTCCTGAAGACATAAAATATCTGGAGACCACAAACCAAACTCGAACACTAACTTTTCCTTCCGCCAGTTCCAATCCATGATGAAAGATGGTATGCGCTCATAAAGAAACTGGTGCTCCTGGGCCAGATAATCAGCTAGTATATTGTATGATAGAACCTTAAACCTCTCTGCATGATAAAAAAAGATCTACTCAATATACCAAAGGAAAACACGTGGTAATTTTAAAACAAGAACATCAATTCCACACACATAATGATTACTCGACTTTAATACTCTTGGTCTAAAACACACCATGTCCATGGGTAATTATCTGACTGAATTATTCATATACGGAAAGTGTCTACTTTTACATCTTCAATACTTCTGAAAGTTTAGTTTTCACCCCTCAACTGTAAAACTGAATAGATTACAATCATAAGCTTGAAATAAGGTGTTTGCTCATGGATAAGATGCCCATGGACCCTTTTCTGTTTCCCTCTCCCATTCTCTTTGCCCATTATCCTGTCACAGAACAAGATAGTTAGCTGTGATATTGATTTAGCTGAGGAGAGAGGGGAAAGGTAATAGGAGGGAAAGAGAAACTGTATCACTTTTCCAATGCCTTGCTGTGGCATCAGTGCTAGCATGGCAGTGGATGTGGCGCTGAAGTCTGTTTCAGGCTTGATCGGTTAGGGGTGTAATTTATCTGGTATAGAAGGTTCAGTGGTGGTTTTCATCCACCTTGAGAATTGAGGTGTGAACACGTAAACTTTTGGAGGAGTTGAGGGGCATAAACTAAATCATTTTCCTTCATATATCATATATCACATACCACATGGCACATCTGTTGTCTAAAATCAAGTGAAACTATAATCCATTACTAGTTTAGTACACAAACCAAATTGAAAAGCTTTCACCATTTTGACTTCAGAGAAGTGCTAAGCCATCAAATATTAAGAAACTCCGATCATTAATAACCTAAAAGTTTTTCCACACAAAAAGTAAAAAGCAATTACACTATTTTTTACTTCAGAGAAGTGCTCCCTGGATGGTTTGCTATGCGATTCTACTACTACTGCAGTGCTAAGCATTGAGACAGAATATATCACAGACTCTGGAAGATGTTACCGGCTTGGCGTGGTGGCCGATGCTGCGTGAATCGCCACCGTCGGCGGTACTCCGCTAGCCTTGGTGATTGCTGCGGCGCACCAGGCCTGAAGCCGGCGTACGGCGGCCGGAACCCTGCATTTGTTGGCCCACGCCAGTACGGCTGCGGATGCCCCTGGACATACGGATTCGGGGTCGCGTATCCGTACTGAGGATCCTGTGGCTGCGGCGGCGGGGGCCCGTAGTTGTACGGCACGGCCCCGTAGGGCGGGCCCGGCTGCTGCGGGTGGCCGTAGTTGTACGGCACGGCCCCGTATAGCGCCGGCGGCGGCTGAGGCGGCGCGTATCCGTACAGCGACGGAGGAGGCCCGCGGCCGCCGCCGCGGCGGAGCGAATCGTTGGAGGCACGCACCGCGCTGTGGTGGGAGTCGCCGCTGACGAGCTCGGCGCCGGCGTCGTGGTGGTGGTGGGGAGGCGGCGTGGGTCGCCCGGAGTAGTAGCCTCGTCGCGGGCGAGCGGATCCTCGGGCGTTGTAGTAAGCGGACATGGCGGCGGCGCGGCGTAGAGAGGCGCGGGAGGCAAGGCGCATCGCTTTGGCGGCGCTCACGACGGCGACGGCGGGCGGCGGCGGCGGTGGCGGCGCGGCCGCGTTCGACGGTCGAGTCGCTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0026600.1 | 1 | 24156617 | T | C |
| Osa01LNT0026600.1 | 1 | 24157305 | T | C |
| Osa01LNT0026600.1 | 1 | 24155686 | C | A |
| Osa01LNT0026600.1 | 1 | 24156829 | A | G |
| Osa01LNT0026600.1 | 1 | 24157412 | T | G |
| Osa01LNT0026600.1 | 1 | 24158027 | G | C |
| Osa01LNT0026600.1 | 1 | 24158449 | A | G |
| Osa01LNT0026600.1 | 1 | 24159727 | C | G |
| Osa01LNT0026600.1 | 1 | 24160608 | A | G |
| Osa01LNT0026600.1 | 1 | 24160131 | A | G |
| Osa01LNT0026600.1 | 1 | 24160695 | T | G |
| Osa01LNT0026600.1 | 1 | 24160802 | A | G |
| Osa01LNT0026600.1 | 1 | 24160961 | A | G |
| Osa01LNT0026600.1 | 1 | 24161063 | G | A |
| Osa01LNT0026600.1 | 1 | 24161942 | A | C |
| Osa01LNT0026600.1 | 1 | 24162183 | T | G |
| Osa01LNT0026600.1 | 1 | 24158410 | T | C |
| Osa01LNT0026600.1 | 1 | 24159792 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0026600.1 | osa-miR6248 | Cleavage | 4.5 | 19.166 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR6248 | Translation | 4.5 | 18.548 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR7694-5p | Translation | 4.5 | 12.162 | 1 | 24 |
| Osa01LNT0026600.1 | osa-miR160f-3p | Cleavage | 4.5 | 21.482 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR435 | Translation | 5.0 | 10.904 | 1 | 20 |
| Osa01LNT0026600.1 | osa-miR395v | Translation | 4.5 | 18.948 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR1428a-5p | Cleavage | 5.0 | 17.789 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR1429-3p | Cleavage | 3.0 | 11.958 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR1430 | Translation | 4.0 | 15.945 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR810b.2 | Translation | 4.5 | 15.484 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR1877 | Translation | 4.5 | 17.205 | 1 | 24 |
| Osa01LNT0026600.1 | osa-miR2921 | Translation | 4.5 | 16.762 | 1 | 24 |
| Osa01LNT0026600.1 | osa-miR5487 | Translation | 5.0 | 15.413 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR5499 | Translation | 5.0 | 18.628 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR1437b-5p | Cleavage | 4.5 | 19.964 | 1 | 21 |
| Osa01LNT0026600.1 | osa-miR5499 | Translation | 5.0 | 17.59 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0026600.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0026600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0026600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0026600.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0026600.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0026600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026600.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0026600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0026600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0026600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0026600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0026600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)