© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0297400.1
TTCATAAAACTAATTGTAATTAAAGAGAATTTTTTGTATTACATGGAAAATCATCCTCATAAGTCATGACATTAAATTTTGTTCAGAACATCATGCACAAATGTAAACTAAACTATAGAAAAAAAAACATGCATCTGAAGTTGCCACTATCATTGCCACCATCTTCCATATTACAGTCATCATCATATTCACAAGGGATCTTTAGATGACAGTTGTCCACCTTGCAGTAACCATATTGCCCCAGATCATGATCCATTTATCTTGTCAACAAAAATTGCTGGCCACGCAATATCAAGTTTTACGACATTGCTAATAATTTTGTAGCCTTTGTATGGCCTGATCAATTCTTCATATTTTGCCAATGGAAAATGAACATGCACCATCAAGTATTCAGTTCCTAGCTCAACACCTGCAACTTTGCGTGTTGGATCACAGCTTACAATTGAAGCAACAGCCACATTCTTATTTCGATTTTTCCAGCTTTTCAAGAATACATTAGTTCCAATCTTATAAGCATTAGAATTATTCTTCCCTTGTTGCATGTGATCATTCTGGTTCATGTTTCCTTTATTCTTCACACAAATAATCTTCCTCTGTTTCTCAAGGTGATTTTGGCCATAAGTTTGATTGCTCTTATATATAGTAGATTGCTTGGTTGGTAGTTGCAAAACCTTGTTCTGAACATGGATATTTGTGTCCTCCATTGAATTGTCAGCGATAAAGTTTGTTGTGCTGCACTGTCTTTTCTTAGGAGCAGCAGTTGGTTGGTTTTGGCCTAGTCTAACATGGCTCTGAGCATTTTTTTTCTCTTTCTTTATTCTTGGATGCTTCAACAACTTTTCGTGCATTCATCACATGGTTTTCCTTGTTAGTTTTTTTTTTCTGTGCAGAAATAACCTTCCTTTGTTTCCCATAGTCATGTTGTTCCCAATTTTGTTTGTTCTTGTCTTCAACACATTGCTTGGTTTTTGGTTGCAAATCCTCATTTGGAACATGGCTCTGTATATTCATCATATTGTTTTCCTCCTGAACCATATCGTTTTCCTCCTCAGCAATACAAATTTCTTGCAAGGGATGGTCAGAATACACTCTCCTCCTTTTCGAAATAGGGCCATCAACACTAGCTTCTTTGTTTGTAGATACTCGATCTAAACCTCCCTGATTCATTTGTTCTTTTTCCAACTTGTTTGTCTTCGCTTTCAATTCCAAAAGCTCAGCATCATGATTCTGGACATGATTTTCGATCTTTTCCAACTGCAGTCTAGCAGCCACAACATCTTCACTCCAGTTATCATCCAGTCTAGTAACATTTATATTCTTTAAGCGTCAGGAATTTGGCACATCGAGAACTTGTTTAGGCTTTGGAACTAGTCCAAGACCATGCACATGCCCAGGCTTGTCATCTCCAAGTATTTGGTTCAATGCATCTCCTTTCCAAGCAGTCCTTCCTTCACTAGTGTCTGCTAAAGCTGGTTGTTCAACTACAAGTTTCTTCAAATTATCCACATGCCCATTTAGATTCTTGCCAGTTTTGCGCTTGTGTGTTTGGATGTACACAATAGCTCTGTGAGGATTCTTTGCAGGATCTTTTTGTCTCATCTCTTCTCTTGTACGAGCAAAACTATTTGTCCCTGCTGTGTGTAATGCCTTCTTCTTTCGACAATTTTCCTTGTTCTGCTTGCTTATTTTCTTCGATTTCTCGCTCATCCAATGATTGATAAGAGCAATCCACTGGTCAGGAAGCACATCAGCTGGGACATTGTTGCAATTAGCTTCTTTGCTCTTATTCACATCAAAATACTTTTCTTTTAGTTTTGCTTTATGTCCCCTCCATCTCTCTCTAATTGTTTTTAATATGAATTCTTCCATCCGAGGAGCATAAAGGAATCTCATCTGGATACCAACAAAGAAACTCATCTAGGGATTTTGTTTTTCTCTCTCTCTTTCCTATTAGAAATCTCCAGTCTGTGTAGCTTAAGCTACACAAAGTACCATTCCTAGCTACCATTCCAAGAAATTTAGACAAAATTCCAGCTTCATCTCCTACTGCCTGGTTGAGATCATTGCACTGAACCACAATCCTAAGCCTTTTCGGAAGGTTCCAAATATCTTTCAGTTTTGTCTTCCCACGTGTTTCAATTGTTCCATTTTCATCTCGAACATTAATTTCAACATCATCATCAGATTCTTCATTGCCTTCTCCAGCATTCATACTAGCATCGTCATCAGTATCTTCATTGGCTTCTCCAACATCGTCATTAGTATCTTCATTACCCTCTTGAACATCACTACATATTGTTTCTTGTTCAGATGGTGTGGCAAGCTGTTTAGGGGCATTTTCTTCTGCAATGTGTTCCTCTGACAAATATTCCTCATGGCTTTGAACAATGCACCGCCTTCTACTCCTTGCCATATTGGTCTGTTCTAGCCTAATAGGCTCTGTCACCTAGGATTCATCACTGCATCTGATCCAAAACCTGCATACAGAACATATATATCAAATTAGTAATGTAGTATAGTGCTGAAATGGAATTAGGCCCGAGTGTGATTTGGCAACACAGCTAAGTAGTGAAACATGTAGGAACTAGGAAGGGAGGCGGAGATGCAGGAGCATGGCGGCAGGGCCGTGGGGTGCGCGGCGCGGTGTAGACGTAGGCGCTGGGGAGGCAAAACCGCACTAGCGCTGCAGTGCACGGCCACCGGGCACGAGGCGTCGCCGCGTGGCCCTCAGCGGCCGTGGGGGAGCTCGCCTGCTCAGGGTTGTTGGTCGGCAGGGAGGTGTAGGTAGGTGCATAGGATGGCAGCCAACACAGATTGGGAGAGGAGTGGACACGCGGAGCGGAGAGAAGAAGAGAGGGGATAGAGTTTCGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0297400.1 | 5 | 6358459 | T | C |
| Osa05LNT0297400.1 | 5 | 6360972 | A | G |
| Osa05LNT0297400.1 | 5 | 6360622 | G | A |
| Osa05LNT0297400.1 | 5 | 6361806 | T | G |
| Osa05LNT0297400.1 | 5 | 6362353 | T | C |
| Osa05LNT0297400.1 | 5 | 6358940 | G | A |
| Osa05LNT0297400.1 | 5 | 6359458 | T | G |
| Osa05LNT0297400.1 | 5 | 6360912 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0297400.1 | osa-miR5527 | Translation | 4.5 | 16.286 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR5790 | Cleavage | 5.0 | 19.598 | 1 | 24 |
| Osa05LNT0297400.1 | osa-miR5816 | Cleavage | 4.5 | 10.263 | 1 | 24 |
| Osa05LNT0297400.1 | osa-miR5820 | Cleavage | 5.0 | 15.65 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR395f | Cleavage | 5.0 | 13.142 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR398a | Cleavage | 5.0 | 13.967 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR169f.2 | Cleavage | 5.0 | 13.672 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR169i-3p | Cleavage | 4.5 | 17.972 | 1 | 22 |
| Osa05LNT0297400.1 | osa-miR1854-5p | Cleavage | 4.5 | 15.224 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR1861d | Translation | 4.5 | 15.123 | 1 | 22 |
| Osa05LNT0297400.1 | osa-miR1861h | Translation | 4.5 | 15.123 | 1 | 22 |
| Osa05LNT0297400.1 | osa-miR1861j | Translation | 4.5 | 15.123 | 1 | 22 |
| Osa05LNT0297400.1 | osa-miR1320-5p | Cleavage | 4.0 | 8.772 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR1320-5p | Cleavage | 4.5 | 11.307 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR5492 | Cleavage | 4.5 | 9.278 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR5492 | Translation | 4.0 | 10.296 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR5492 | Cleavage | 5.0 | 8.541 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR5504 | Cleavage | 4.0 | 12.613 | 1 | 21 |
| Osa05LNT0297400.1 | osa-miR2118a | Translation | 4.5 | 13.811 | 1 | 22 |
| Osa05LNT0297400.1 | osa-miR529a | Cleavage | 3.5 | 7.563 | 1 | 20 |
| Osa05LNT0297400.1 | osa-miR394 | Cleavage | 5.0 | 18.463 | 1 | 20 |
| Osa05LNT0297400.1 | osa-miR1854-5p | Translation | 5.0 | 17.054 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0297400.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0297400.1 | 5 | An7-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa05LNT0297400.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0297400.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)