© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0297500.1
ACCGCAGCTAACGAAACAACACTTATATGTATACACAAGATATTATCACCAATATTACATATAGAAACTTAGGAAAAGGGTATGAAGTATTTGAATTTCACAGGTTGAACCGTACATCACCTTGATAGTGCCAAGCCTGAATTATGGGATAAAGTTAATTATTCATCCATACAAGAGTTCACACGTAAAAGTTCTACTGACACAGTGTAATATATCTAACTGATCACTCTCCTTGAAGAAAGCACATGCATGATACGGATCCATATTTATCTTTCATTCGCTCGTAGATGCTGAACCCATCATGTTCACTGTTTGCAGTCCTCTTTCACTCTCGGCAACCATGTAGCTATGTTAATCTCCTTTTTTTTTGCAATGTAGAACAGAATATAGTTACTTCGCTCTTTGAGTACATGTTGTCATTCTGCAGCTCCGTTTCCCTTCTCTGCATGTACTCAATTTCAGCACACAGATATTCGTTCTGTTGGAGTTCTGCAGGTAGGTGATATGTTGCTTCAGCTTAGCAGCCTCCTGCTGGTAGTGCTGGGCATTGATCTCTGCAACTGTACTGGTATTGGAGGTGTCACTGTTGGCTTTCTTGTACCTCTCAATAGTTTCCTCCACGCTGTTGTTGGAGTACTCGTAGAGGCGGCCGCGGCTGGAGAAGACGATGAGGGCAACCTCGGCATCGCAGAGCATGGAGAGCTCATACGCCTTCTTGAGTAGCCCGTTGCAGCGCTTGCAGAAGGTGACCTGACGGTCCGCTGTGTCCTCGATGCTTGAGCCCTCTGAGCTGCCGGAGCCGGGGGAAGCAGCAGGTGCTGGTTCTGGCATCATCAGGCCAGTGGATGGTTCAGCCTCCTGCTCTTTGTATATGTGCATGTTTGCTAAATCCTCTCTATAATGAGGAAGAGAGGGGTGTGTTCAAGGAGAAGAGAAAGGTTGGGGAAGGATGAGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0297500.1 | 5 | 6425747 | G | A |
| Osa05LNT0297500.1 | 5 | 6425900 | G | C |
| Osa05LNT0297500.1 | 5 | 6426078 | G | C |
| Osa05LNT0297500.1 | 5 | 6426330 | G | C |
| Osa05LNT0297500.1 | 5 | 6426463 | A | T |
| Osa05LNT0297500.1 | 5 | 6427633 | C | T |
| Osa05LNT0297500.1 | 5 | 6427759 | A | T |
| Osa05LNT0297500.1 | 5 | 6428855 | A | G |
| Osa05LNT0297500.1 | 5 | 6429037 | A | G |
| Osa05LNT0297500.1 | 5 | 6429251 | A | T |
| Osa05LNT0297500.1 | 5 | 6429297 | T | A |
| Osa05LNT0297500.1 | 5 | 6430219 | A | G |
| Osa05LNT0297500.1 | 5 | 6430277 | T | A |
| Osa05LNT0297500.1 | 5 | 6430521 | T | C |
| Osa05LNT0297500.1 | 5 | 6430824 | C | T |
| Osa05LNT0297500.1 | 5 | 6430927 | T | A |
| Osa05LNT0297500.1 | 5 | 6431215 | A | G |
| Osa05LNT0297500.1 | 5 | 6431233 | T | C |
| Osa05LNT0297500.1 | 5 | 6431259 | A | G |
| Osa05LNT0297500.1 | 5 | 6431820 | A | G |
| Osa05LNT0297500.1 | 5 | 6432041 | G | A |
| Osa05LNT0297500.1 | 5 | 6432256 | C | A |
| Osa05LNT0297500.1 | 5 | 6432700 | A | T |
| Osa05LNT0297500.1 | 5 | 6432874 | T | C |
| Osa05LNT0297500.1 | 5 | 6433168 | A | G |
| Osa05LNT0297500.1 | 5 | 6433558 | T | C |
| Osa05LNT0297500.1 | 5 | 6433654 | A | T |
| Osa05LNT0297500.1 | 5 | 6433985 | A | C |
| Osa05LNT0297500.1 | 5 | 6433260 | T | C |
| Osa05LNT0297500.1 | 5 | 6433791 | C | T |
| Osa05LNT0297500.1 | 5 | 6428508 | T | C |
| Osa05LNT0297500.1 | 5 | 6428365 | A | G |
| Osa05LNT0297500.1 | 5 | 6428481 | T | C |
| Osa05LNT0297500.1 | 5 | 6428450 | T | C |
| Osa05LNT0297500.1 | 5 | 6428475 | A | C |
| Osa05LNT0297500.1 | 5 | 6428610 | A | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa05LNT0297500.1 | DTM_#DNAt_MULE_japo_Os0218 | Chr5 | - | 6428344 | 6428651 | 307 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0297500.1 | osa-miR6253 | Cleavage | 4.0 | 11.792 | 1 | 22 |
| Osa05LNT0297500.1 | osa-miR2864.2 | Cleavage | 4.0 | 11.537 | 1 | 21 |
| Osa05LNT0297500.1 | osa-miR5504 | Cleavage | 4.0 | 12.94 | 1 | 21 |
| Osa05LNT0297500.1 | osa-miR2275d | Cleavage | 5.0 | 21.174 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0297500.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0297500.1 | 5 | An7-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa05LNT0297500.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0297500.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)