© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0297800.1
GGGGGTACTGTAGCAGATCATCCATTTCTATCTATCCCTTTAACGACAACTACTTAAACCTCTGGGCAATTAATCATCATCATCATCAATTACCAACTTGTGTCTTCTTTTCAGACCAGGCTTTTGATCAGCAAAAGAGCTTTCCATGTCCCCAGATTCGGTGATATTTATATCATCGATTACCCTTTGCTCAGTATTTTCAACGTTATCTAGCTCAGGCTCAATGAAGTCATCCAAAAGTTCTGTTTCACCAGCACCGCCACTGTTATTAGACGAATTTAATCCATGGTGCAGATTATCCTTAGAACTGATAGTTTCATCGTCTTGACCTATGTTTTTCAAAGGCTCTTCATGTTCTTGTGTATTTGCTGCAAAACCTGACTTCAATAACCTCTTCTTTTTCCCACTTCTATGCATAGAGTCTATGATCTCATCACCAGAATAAGTGTCTTGCAGGGCTTCTTGTTTTTGAGATATTTCCGGTGAATAATTACTGGTGTTTGTACTGTCTGGTGACTCCTGATGTTTCTCTATATTCATTGCATTGTCCGGCGTCAACAGCCTCTTCTTTTTTCCACTTCTGAGCATAGATCCTATGGTCTCATCATCAGAATCCGGGTCTGCCAAACCATCTTGATGCTGTGATGTACTAGGTGAGAAACCCACAAGTGGTACCTTCTTATTTTTTGTTCTGCTTTTAATTGCTTGTAATGTTTCTTCATCAGATGATTTTCCATCGGTAGTGTTGTCCTCATAGCTAGCATGCGACACATTTTGCCTTTTCCTTCTGCGCCGGGTCGTTTCTGGCTTGGGATCACAGTTGTGTTCACCTAGCATCTGGTCCGTCTGTGTAGCCAATTCTTGAGCTGAAAGAGGTGCCTCTGGAACTTTTGTCCTCCTCTTCATGGCATTCCTCAGGCCTAGCTGTGTGAGCTTTCGATAAACTTGAACAGAAGAAATCTTTCCACTGGGGTCTAAAGCTTCAGCAATGAGATGAGTGCATTTGCGGTCATCTTTGTATTTTTCATAAAGATCTCTCATAAGCTTCTCTTGCTCTTCACTAAAAATGGAACGACCTCGCCTTTTGGGGGCTTCAGAATTCTGAGAACCTCTTGATACAGTGTTCCTATCATTATCGTCAGCTTCACTGTCTGAAAATGACAATATCCTGTTACTTTTATTTGTGGCACCCATGCTTCTCTTAGAAACATCTTCATGTTCGCCAGACGATGAATCATCATCCTTATCAGCATTATATGGTTCATGTGGTATAACCAAGTCCACTTCGTCATCACCAAGAGAATCTGCTATGTTTATTGAACCTCTCCATCCCTTACTTGAACCAATTTCGCCACCCTTGTTTGTAGCATCTTTTGTGATATCACTCAGAAGAGCATCAGCATCAATGCAATGGCACTCCTTGCGTGTTTTCCAAAAGAGTACATCAACAAATAGCAATGGTTGTTTCTTCATTACCCTCAGCATCTTTCTTACAATTTTAGAAAGAAAATTTACAATGTTCGTATACTCCTTTGAATTTGATGATTTCTCGTCAGCTAATATATCATAGAAGGTAGTTAGAAGGGACAGCTGATAGAGCATTGGTGCCAATTCCAGGTCTTCGCAAAATCTCCGCAGCATGCATATTATGTAGTGATTTGTTCGAAAGGAGTTACTCTTGTAATGCTTCAACAACCAACATATATTTTGGACAACAGAATTGTTCGCAAGAGTAGATATTAGTCGGGATACATTGAAATCAACTTCACTAGTAGCAGGGGGTTGATCATCAAGTGAAGAGTCTGAAGTCCCATCCTCTTCATCAATTAGATTTCCTTTCAGTTCACCATTGTCTGCACGAGATGGCTCGCCTTCACAATGCGAGGTGCTATCCAGATTAACTGATGTGCCAGCAAGTTCATCTGGTGCATCCATGCCGTTGGAGACAACTTTTTCTTGCTCTGTGAGAGGAGGCTCTGCTACAGAATCCACATTTTTCAAATCTGGAAGTGATTCAAGTGCAGATTTAGTCCCATCTGTTGAATCAACATTGCTCTGTTCCATTTTCTCTGCATTGAGATTTGTGTTCTCAATTTTGTTCTTTGAAGCCTTCTTTTTTCTTCCTTTTCTTGTCCTTTTTGCAACCCTTAATGCACCACGTGCTTGAAGCTTCTCCATGAGCTGTAGCATGATATGGATTGTTCCTAGTAAATCTGCAAGATCACTTTTTGGTTGCTTATGAGTATCAAATGATCTGAATAAGTTCAGCAGAAATTGAGTGAGCCCTTGTTCTGTCTGATCATAAAACAGCTTATACAGTAAAACACGAGCTGTTTGAGATTCTCTTGAATCATCAGGAAGTACTTTAAGCACCAAATATACCATGTCAATCATGTTCTTCATTAGAGACCCAGCTGCTGAAAGAGTCTTGTAATCATGTGTTTCCTTCAGGCTATCATAGGCCTCACGCCACCTGGAGATGACCAAGTTAAACATACCTTCATTCAATGTGGCTGCAACAGGTCCGCATATGTCACCAAGAAACGGCAGATTATCATCAAGATGATCGCTAGGAGAAGCCTCAGGCAGTTGGACCGCAGCATTAGATTTCTGAGCATTTGATGCCTTCTCGTGTTGAAAAGCTAAGACAAAGCGAGCAACTTTGAAGAATGTAGTGATGTCAGATTTCTGGATAGAATGATGCTCCTTTACGATATCATCACAGACAGACTGCATGAGGACATTGTATCCTCCAGATAAAAATTGTTCCAGGAAATTTCTTATCATCTCCATTGTGCCCTCTCTCGGTGTGTAGAGAAGCTCATTATCCCAGGCAATCCTTTTCTGGGGCCCTCTTTGGACATTACGTATTTTCCTTAGGCTATTTGCAGATGCGGAGTTGGGGTTCCCTTTGCACAAGGATTTAGATCCGTCCACTGCCGTGCATGTAAAAATTCCACTGATTGAGTGATGCTCTGAGTTTCGTTGCCTGAACATCCTCTTTTTCCTCTCTTCCTCCTCCATCATTAATCTCAATGAATGTACTGATGTATCGATATTTCCTTCAACATGTTCCTTTGAACCTGCAGTAGAAGCTCTAGCAATCAATTCTGGATCCCGGCCTAAGAAAAGGTAATGAAAGATTTCCAAAAGAAGAAGGTTTTCCTGCTGGAGATAACCAGATGGCTCATCCATATGTTGAGTCAGCACTAATATTAGATCCATCACATTCTCTTGAAACATGAGCTCTAAAAAGCTGTCAGCTAGACAGAGCAACTGGGTAGCTTCTCCAGATGCCTTCTGACCCAATGTGATTTCTTGAATAGCCAAGATGTTGCGGAACAAAGTAAGCACCAACTGAACTAGTTTCCAGTCATCTTCTGTGAATGAAGCTCTTTCCAAATGGTCCAGTGGATCTTCAAGAAGAGACACAATGACAGCCATAGCAACATTGCGCGTCAGTGCTGCCTTCAGATCCCAAAGATACTCTATCTGTTGTGCAACATTCTCTGATGACGGCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0297800.1 | 5 | 6843476 | G | C |
| Osa05LNT0297800.1 | 5 | 6843745 | T | G |
| Osa05LNT0297800.1 | 5 | 6843746 | C | T |
| Osa05LNT0297800.1 | 5 | 6843847 | T | C |
| Osa05LNT0297800.1 | 5 | 6844104 | G | T |
| Osa05LNT0297800.1 | 5 | 6845745 | T | C |
| Osa05LNT0297800.1 | 5 | 6845867 | A | T |
| Osa05LNT0297800.1 | 5 | 6847500 | T | A |
| Osa05LNT0297800.1 | 5 | 6848149 | C | T |
| Osa05LNT0297800.1 | 5 | 6848169 | C | T |
| Osa05LNT0297800.1 | 5 | 6848192 | T | A |
| Osa05LNT0297800.1 | 5 | 6849316 | T | C |
| Osa05LNT0297800.1 | 5 | 6849491 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0297800.1 | osa-miR5815 | Cleavage | 5.0 | 14.719 | 1 | 24 |
| Osa05LNT0297800.1 | osa-miR6251 | Cleavage | 5.0 | 18.068 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR1861o | Translation | 3.5 | 19.305 | 1 | 22 |
| Osa05LNT0297800.1 | osa-miR167e-3p | Cleavage | 5.0 | 19.179 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR167i-3p | Cleavage | 5.0 | 19.179 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR171c-5p | Cleavage | 5.0 | 15.459 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR426 | Cleavage | 3.0 | 13.444 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR535-5p | Cleavage | 5.0 | 12.644 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR444b.2 | Translation | 4.0 | 19.964 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR444c.2 | Translation | 4.0 | 19.964 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR1846d-3p | Translation | 4.5 | 17.696 | 1 | 20 |
| Osa05LNT0297800.1 | osa-miR1861a | Translation | 3.5 | 19.305 | 1 | 22 |
| Osa05LNT0297800.1 | osa-miR1865-5p | Cleavage | 5.0 | 15.652 | 1 | 24 |
| Osa05LNT0297800.1 | osa-miR1870-3p | Translation | 4.5 | 15.548 | 1 | 24 |
| Osa05LNT0297800.1 | osa-miR2919 | Cleavage | 4.0 | 7.872 | 1 | 19 |
| Osa05LNT0297800.1 | osa-miR5339 | Translation | 5.0 | 15.432 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR5488 | Translation | 5.0 | 18.809 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR5508 | Cleavage | 4.5 | 10.5 | 1 | 21 |
| Osa05LNT0297800.1 | osa-miR5521 | Translation | 4.5 | 13.241 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0297800.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0297800.1 | 5 | An7-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa05LNT0297800.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0297800.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)