© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0298600.2
GCAGCTCAATGTAGATTTATTGAAGTCGTTACATTTGTGTTCATCGCTGGCTAACACAACAACAGGTAAGATGATGTCCATACATTTTATTTTCCTAATCATCTAACTTGTACATACATTCTTTTACACTACAACATAGGCTCCCGATATGAGTCACTACACTTGCCCTATGGAATCCTTCTAATTAACTAGTGTGGTGGATGTCACAACTACTGTAAATCAAGGAATGATTTTGCTACAACAAACAGCTGATCATCAGATTGGGGAACCCAGATTCCTTGATCTGATCCCAACAGATAAATGGCATGTCCTAACTCCTAATGCTATTCACTATTCACGAGAAAGGGTGGCAACAAGAAGAGGAGCAGCTTTTGTAGCAGAGCATTAATGTAGATGGTGAATTTCAATCAAACCAACGAGGGAAGGAACTCAAATTTGTGCCTTCTGACAAGGGTGTTTGACTAGGCAAACCCTCTTAAGTCATGGGAGAATGCAAAGTTGGGCGGCAGCAACATAAGGGGATCGTCTCCAGACTTCTTCAGGTAGGCCATCGCCAGGGCGTATCCAAGTGCTCGTCCAACAGGTACGGCCACCGCATTTCCAATCTGGCGATACCTGTCTTTGACTGTTCCACGAAACCTGTAATTGTCAGGAAAGCCTTGCAACCGAGCACTTTCACGAATAGTAAGCAGTCTGTCTTGTGCAGGATGTATCAAGGCCTGCATACGGGCATTTGGAACTGTCAGCACGGTTCCCACTACCTCATCCCACCATACTCGACCAAAAGGTCTTAAAGATTTACCATTCTCATAAGCTAGTATGCAATCAAGCACCAGAGGACGACCAGATGGCAAAAGTACTCTTTCTTTCGTTGGATCTAATCTAGCCACATTGTCAGGACCAACTATGACTCCTGAAAGGTCTCTAAAATTAGCTCCCTTTCTCTTGGGAATTTGCAATATCCTTTGGTAGTTATCATTATCCAGTACCAATGGTCGATGATCATACAATTTTGAGGATTTGGAATCTTTTGTAACATGAGCTCTGGGACCATGCACTTCAACATTAAATGACCGAATGTATCTTTGGAATTCAGTTTGAGGACCCTTTACATACAGCATTTCATCACGGCTTTCCCCATTTGCCACTTCTGGGAGATCAGAAAGAATGTCTTCAAGGACAATTGGTCTTGCTAGTTGCATTGGTGTGTCATTGGGCCAACCAACCAAATTACGCTCAAAAGCCAACGGGCAGCCATTCTTCACAATCGCCTCATGCGTAGGCAGTGGAAAAGGGGGTAATTTCTCCTTAGAATGACAGCCTAATAAAAATACACGCATCCGAAATTGTGGAAGGCCATAACATCCAGCAGCCATGATCCCTAGCCTTGCTTGATAATGCATTGCAACTAGCCGACTTAAAGCATATCTTGCAAGTGTTGCATCAGCAAATTTCAATATATCAAGGACGTTTTCCATGTACACATATTTGGGCTTCAAAAATTGCACAACATCCATAAAAACTATGATCTGCTTGTTTTTCTCACATTTAAATGGTGCCTCGAATTCTCTATTGCGGTTGTAGCCACTAATTCCTTGGCATGGTGGACCCCCACATACAACGTCCACATCACCAGGGCGTGGTAGTATTCTTTGCCTGTGGCCTTCAATAACAAAATCCCTAATTGCCTCTTTGCAGTTCCTTAATCCTTCAACTGGCTCCCATGTGTCATGATGAGGGCCATAACCCTTCCAACGGACCTTAAAATACAAGCCGTGTTTGCTGACTTTATTTGGATCACCAAAGCAAATGTCAACTAGCTTCCATACTTCAAACTCCTCAGGTGGGACGGTAGAACAATCTGGAGTTTCATTATTGGATTCTGTTGTACTGTCAACACATGCCTTAGTCCTACTATGTTTCACATATGTTTTGCATAATTTCTCCCATTCTTTTAACAGTTCAAGGAAATCATCCGTGGTTTCATTCCGAACCCGTGTTTCTGGATGATTGTTCCTGAAGCTTTCACATGCAATTTCATCATCATCAATGGCCCATCTCGCTGAAAGATTCACACCACCACCACGAGCACCAAGGCATAGTCCAGTTGACATTCCTCCACAACCACAATACAGGTCTAGCAAAGAGAGCTCCATCTTCTCTAGCACAGGAGACTTGTGCTTCTTATTGACATCTATCTTCTTCATTTTGTCATTGATTCTACTAGTGTAACATGACTGCATTAAATCATCTGTGTCTTCCATTTCTATGGTAGAGAATGTACTATAGTCGATAGAGTATTTCATGTCATAGTAATAGTCGGACGAAGGAACTGACTTTGATTTTCCATCTACACTAGGAGGAACTTGCACGATTGTCACTTTCGAGACAATGCAGTCCAGTAAATTGTCATCTGTCAGGTCTGAGTAAAAGAGCCTCCTCGGGTCATGTGATTGTGCTTGCTCTCCTATGACCGTGTCTTCAGCTGTGAAAAACCATTGCACTCTGAAGTAACATTCACCAGTTTTTGTTTCGAAGAACTCTAGCAACCTGCCAATATAATTTGGTTTTCCCTCTGGACCCTTTACAAATGCGCATTCTCCAATGCAAAATGTGTATCTGGAGACTTTGGCTTGTAGATAATGACATTTGACATCCAAGACAGCTTTGCCAGCATTGGCAAATGTTTGGCTGCTGGTCCTCTTATCCTCGCAGTAGTGCCACAAGGAGACATCCAGTAACAAAACCAGTCGTACAGTCAGTAAATAGTAACATCAGAAGGGGAGTGCAGTAACACACCACTGGAAACTCATTAATGAGTGCACTATGTTTGAAACGGCACACCCTTCATGCTGTTACTCCACGAGGAGAATAACTATTCTACACCTTTTTCATGATTTGATCATTTATTTCGTAACGGTGAGGCCACTGCTTCCTAGCCTCATCATCAGGAACTGCATCCCCCACAAAGAAACAGGAACCATCGTCCGTTTCCAACATCACTGAATCAACCATGTGCTTGTCCAAAACAAGTTCGTGCTTAGTGCTCAGTTCTGGTATTATTGGAACTCTTGGTGATTTGGACATTGAGCCATTATTTTCTGGTATCATTGGAACTCTTGGTGATTTGGACATTGAGCCATTATTATTATTGTTTTCTGCCCTCTTTAATTTTTCCAAGTATTTAACCGACAACGTCCTGGCCCTCTGTGTCTTTGGAGGTTGAGGGGATCTTCTTCCTCTCCCTTGAGGCGTCTTGCTGACCACTCGTGATTTTGCACTTTTCAACTTTGAGTTGCACAACACAATACCACCACCATCCACTCCATCCAGACTTGTCAAGCACTCTTCAACAGCAAGCTTATGCTTTTTAGTAGGTATACAAACATCTGATTTCTGCACAGGAGGTCCACCATTTACCACTGGTGATATAGCTGACACCCTGTCTGAATTCACCAATACCTTTGAGGCTAACCTAGTCTTCCTTCGAGGAAGAACAGAAGCTCCTTTGTCTTTCAACAAACTATTACTCGCTGCTGGTAAAGCCACCACAACCTGATTGTAGAGACCACCTGCTTTCTGATTATTGTCGTAAGAGGAACTTACGTTTTCCACGGCAACAATTTCTTGCAATCCTTGAACCTTCACCCCGTTAATCAAATCAACTGTGTTTACTGAAATTGGCCCTGTGAACGCAGGGAGTTTGCTCCCTTCACTGCTTCTACTCTTCCTTGAATCCGCAACTCGTCGCTTGGAAGCTCTAGATGAGTCTCCATTCTGATTCAAAGGCATGGAGCTCGCCGCTGACTTGATTTTCATGATCCTCCGTGATCTCCGCAGAGCTGTACCATTTGCACAAGTAGCATCCACCTCGGGATCCTTCGCATCCATGGTTGTTCCCCAAGCAACCGAAGGGGAAGAATCCTTGATAGGATCCTCAGCCCCCAAACCGACCTCATATGGGGAAGCAAGAGGTGGCGATGGCACGGAGTTGAGCGTACAATCGAGCATTCTCCCGTCTAAATTGGCTTCCGAGGAAGCGACAGACGGCGGTAGTGGAGACTCCATCGCCGGGGCGGAGTCGGCGACGGGGTCAAACCCCCGCGCATCAAAATCCACCGGAGGAGACGACGATGGCGGCGGGTCAGGCGAACAATCAACGCCGGAATCGAGCGCACTCACCTCAGGAACGTCGCCCAACGAAGCCGCCGCCGCCCCCGCCGGATACGAATCGATCGGCGCCGCGGGCTCGAACTCCGCGAACCCCGCGGCGGCCGTGGGGGGAACGAGCGCGGTGGCCGCGCCCTCGCCGGCGACGACCCCGGAGGACCTCCAGGGCGCGCCGTCCCATGGGCCCCCCGCGACGTCCATGATCTCGGGCTCCACCTCCGCCGCGGCGAACTCGGCCCCCACGCCGAACCCCCTCGGCGGGGACCACATGGGCTCCAGCTCCTCCGGGGAGCCGAACAGGGCCGTCCACAGCGAATCCAGCCCGGCGCTGAACCCCCCCGCGTCCTCCGCCCCGTCGTCGCCTCCCGGCGAGCCCTCGTCGGCGGCGGGCGGCGGAGGCGAGACGGGGTCGGGGGGCGGGGTCTCCATGGGAGGAGGAGCAAAGCACGGGGGCAATTCCTCCCCAACCACCACCACCACCAGCGAAAGGTAGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0298600.2 | 5 | 7635179 | C | T |
| Osa05LNT0298600.2 | 5 | 7634863 | T | C |
| Osa05LNT0298600.2 | 5 | 7635149 | C | A |
| Osa05LNT0298600.2 | 5 | 7635660 | T | A |
| Osa05LNT0298600.2 | 5 | 7636178 | A | G |
| Osa05LNT0298600.2 | 5 | 7636559 | A | T |
| Osa05LNT0298600.2 | 5 | 7636727 | A | G |
| Osa05LNT0298600.2 | 5 | 7637398 | A | G |
| Osa05LNT0298600.2 | 5 | 7637753 | T | G |
| Osa05LNT0298600.2 | 5 | 7638708 | T | C |
| Osa05LNT0298600.2 | 5 | 7638946 | G | A |
| Osa05LNT0298600.2 | 5 | 7639046 | T | A |
| Osa05LNT0298600.2 | 5 | 7639616 | T | A |
| Osa05LNT0298600.2 | 5 | 7640130 | A | G |
| Osa05LNT0298600.2 | 5 | 7643280 | G | A |
| Osa05LNT0298600.2 | 5 | 7643323 | C | G |
| Osa05LNT0298600.2 | 5 | 7643735 | A | G |
| Osa05LNT0298600.2 | 5 | 7644335 | A | G |
| Osa05LNT0298600.2 | 5 | 7644897 | A | G |
| Osa05LNT0298600.2 | 5 | 7645107 | T | C |
| Osa05LNT0298600.2 | 5 | 7645155 | G | C |
| Osa05LNT0298600.2 | 5 | 7645492 | A | T |
| Osa05LNT0298600.2 | 5 | 7645918 | C | T |
| Osa05LNT0298600.2 | 5 | 7642273 | C | A |
| Osa05LNT0298600.2 | 5 | 7647752 | G | T |
| Osa05LNT0298600.2 | 5 | 7639465 | T | G |
| Osa05LNT0298600.2 | 5 | 7641561 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0298600.2 | osa-miR5794 | Cleavage | 4.5 | 16.716 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR5806 | Cleavage | 4.5 | 21.233 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR5837.2 | Cleavage | 4.5 | 10.288 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR6247 | Translation | 5.0 | 15.754 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR6255 | Cleavage | 4.0 | 8.284 | 1 | 22 |
| Osa05LNT0298600.2 | osa-miR395t | Cleavage | 5.0 | 10.412 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR395a | Cleavage | 5.0 | 10.412 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR319a-3p.2-3p | Translation | 5.0 | 23.612 | 1 | 20 |
| Osa05LNT0298600.2 | osa-miR319b | Translation | 5.0 | 23.612 | 1 | 20 |
| Osa05LNT0298600.2 | osa-miR444a-5p | Cleavage | 5.0 | 12.29 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR169r-5p | Cleavage | 5.0 | 14.839 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR169r-3p | Cleavage | 5.0 | 19.771 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR444d.3 | Cleavage | 4.5 | 24.652 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR444d.3 | Cleavage | 5.0 | 10.994 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR1853-5p | Cleavage | 5.0 | 22.424 | 1 | 24 |
| Osa05LNT0298600.2 | osa-miR1854-3p | Translation | 4.0 | 21.965 | 1 | 22 |
| Osa05LNT0298600.2 | osa-miR1863c | Translation | 5.0 | 15.459 | 1 | 24 |
| Osa05LNT0298600.2 | osa-miR2926 | Translation | 5.0 | 16.161 | 1 | 20 |
| Osa05LNT0298600.2 | osa-miR2929 | Cleavage | 3.0 | 16.941 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR5338 | Cleavage | 4.0 | 21.051 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR5522 | Cleavage | 4.0 | 13.636 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR1428a-5p | Cleavage | 4.5 | 17.36 | 1 | 21 |
| Osa05LNT0298600.2 | osa-miR812g | Translation | 5.0 | 19.92 | 1 | 24 |
| Osa05LNT0298600.2 | osa-miR812h | Translation | 5.0 | 19.92 | 1 | 24 |
| Osa05LNT0298600.2 | osa-miR812i | Translation | 5.0 | 19.92 | 1 | 24 |
| Osa05LNT0298600.2 | osa-miR812j | Translation | 5.0 | 19.92 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0298600.2 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0298600.2 | 5 | nt5.1 | Morphological trait | Culm/leaf | RM169 | RM249 |
| Osa05LNT0298600.2 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0298600.2 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0298600.2 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0298600.2 | 5 | An7-glum | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)