© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0299900.1
GAAAACATAAGAATCGGCATAATGCATAATTAGAAAATAGTTAATTTTCAGGATGTTACAGCTTTCCACTTAGAAGAAACTTCACCTGATACGATGATACGAGATGTTGTGAAACATGACAAATCAAGCTTACAAGTTCCAACTCTGACTTCATATGACATAATTTAATATAAGTGGTGCATACATTCGACATCAAAACTACGGAGAACTTCCATGCAGCAGTTCAACTTGAAAACTCAACATGAATACGGCTCCTTTCAAGACATTTTTAACCAGAAGTAAAATCTAAGAGAGATAAGCAACATCCTCCAGACATCGAGATTACCTCGTAACAATGGCAGCTAGAGGCATGTCAGTTGTTAGGTTTTCAAGGAGATGTAGCCATTGTTGATCATCCACTCTAGATTCCAGTGGTTGTTAACATTCTTGAGAGTCCAATAGGACCATCCAAAGGTGGCCTGCCCATAAACATCCATCTGCACCTTTGCATATCTCTGGTACTCTTCCTTTGTTGCATTGGGTACTCTCCACTCAGCCACCCATTCTCCCACAAAGGTGAGAGGGCCATTTTGTGTTGTGACATTTTTTAGCTCACTTGAGAAGTTTGATTTGATAAAATCAATGTTCTGCTGCACAGTCAGGTTATTGAACAGGTCATTGAACACCGTGTAGTAGTGCACATCGATGACGGCACGGGGGAAGCCGTTGGCAAATTGAAGAAACTCAGTTGGATCATGCGGTCCCAGACGGTTCGACATGATGACGTAAGCCGTCGATGAGTATTTCCTGACGGCGTTGTATCCATCATGGTAGTACTTCATCAGACTCTCCAAGGTGGCACGGGGTGCAAACGGTTCATTCATCAGCTCCACTGCCAGGAGGCTTGGGCTCTTTGCGTACCTGGATGCGAGGAAGTCGATCACTTGCACTGTCTCTGCGATGTTAGCATCAGATGTTCCCCACTCCTGCGTGCCATCTCTGGATGAGCTATGCTCCCATGGGTTCTGCGACCCGGGAGCCGCATGGAGATCAATAATAACGCCCAGCTTGTACTTCTCTGCCCACTTGAAGGCATTGTCCAAGGTTTGCAGGGATCCTCCGACATATGGAGCCGGAGGATTGGGATCACTCGCAATCCACCATCCAACTGGAATTCGCACTGCTGTTAACCCGCTTGCTGAGATGAACTTGAAGTCGTCTTCGACTATGTATGTGCTCCAATGATTCCTGAGTATTGGTGTAGCCTTGGCTGTACCATAGCCATTGCAAATCTGGTACTCTCCCTGCAGCTCCAAAACTTTTGTTACTACAAATACTGATGGGTCATCGTCTCCCCAACTTGTGCTTTCACCGTAGTAATCTGCTGTCACTGAGTTAGATCCCAATGCTATCTGCAAGAAGTGCCCATTTGGCGCCCTAATCCGCACCCGGCTCTTGTCGCCGTCGTCGCGCACCACCTGGAACGTCTCCGACGGCCCCGGCGCGGCGGCCACCGCCACCACCGCCGCGCCGCCGTCGCTCCCGGCGCCGACGAACCGGCCGCTCGACGCCCGAAAGTTGAACGTCGTCTCGTTGATCCGCCACAGCTTGAAGGTCTCCGAGGCGGAGGGTGCCGCCTGCGTCCGGTTGGCGACGACCGCCGCGGCGCCGCCCTGGTCGGCGGCGGTGAGGTACGCGCCCGCCGCCACGGCCTTGAGCTGCAGCTGCGCGCCGTCCTGCAATCAATGTGTTCGGCGTTATGCCGGAGCGGCGCGGTGGCACCACCAAAGAACGAAACAGAGGTCATGGTCGGACTCATTCGTGGACATGGCGGCGGCGGCGGCGGCGAGACGGCCATACCAGGAGGTCCTTGTTAGGGATGGCGTCGAAGAGGGAGGGGAGGATCCAGCCCTCCGTGACGAGCCAGCCACCGAGGCACACCGCCCGGACGGGGAGGCCAAAGGAGGAGGGCGGCGGCGGCGGCGAGGGTGGCGTCTTCCTCTTGGCGTCGGAGAGGGAGCATAGCCATGACGAGACGAGGAGGAGGAGGCAGGCGCGTTTGAGAAGACGACTGCTCATCATGCTGATGCAGTGCTGGCTCACAACCTGCTCTGCTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0299900.1 | 5 | 8768124 | G | C |
| Osa05LNT0299900.1 | 5 | 8767030 | A | C |
| Osa05LNT0299900.1 | 5 | 8767219 | G | A |
| Osa05LNT0299900.1 | 5 | 8767626 | A | G |
| Osa05LNT0299900.1 | 5 | 8767759 | C | T |
| Osa05LNT0299900.1 | 5 | 8767918 | A | G |
| Osa05LNT0299900.1 | 5 | 8768147 | T | A |
| Osa05LNT0299900.1 | 5 | 8769515 | G | A |
| Osa05LNT0299900.1 | 5 | 8769632 | C | T |
| Osa05LNT0299900.1 | 5 | 8769673 | T | C |
| Osa05LNT0299900.1 | 5 | 8769686 | A | T |
| Osa05LNT0299900.1 | 5 | 8769752 | A | C |
| Osa05LNT0299900.1 | 5 | 8769981 | A | G |
| Osa05LNT0299900.1 | 5 | 8770431 | C | T |
| Osa05LNT0299900.1 | 5 | 8770525 | A | C |
| Osa05LNT0299900.1 | 5 | 8770594 | G | T |
| Osa05LNT0299900.1 | 5 | 8770656 | A | C |
| Osa05LNT0299900.1 | 5 | 8771576 | C | A |
| Osa05LNT0299900.1 | 5 | 8771639 | C | T |
| Osa05LNT0299900.1 | 5 | 8772133 | G | A |
| Osa05LNT0299900.1 | 5 | 8773082 | T | C |
| Osa05LNT0299900.1 | 5 | 8773205 | A | G |
| Osa05LNT0299900.1 | 5 | 8773217 | A | G |
| Osa05LNT0299900.1 | 5 | 8773232 | A | G |
| Osa05LNT0299900.1 | 5 | 8773251 | T | C |
| Osa05LNT0299900.1 | 5 | 8773462 | G | A |
| Osa05LNT0299900.1 | 5 | 8773546 | T | A |
| Osa05LNT0299900.1 | 5 | 8773839 | A | G |
| Osa05LNT0299900.1 | 5 | 8774175 | T | C |
| Osa05LNT0299900.1 | 5 | 8774239 | A | G |
| Osa05LNT0299900.1 | 5 | 8767546 | G | A |
| Osa05LNT0299900.1 | 5 | 8767470 | A | G |
| Osa05LNT0299900.1 | 5 | 8770919 | A | T |
| Osa05LNT0299900.1 | 5 | 8768136 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0299900.1 | osa-miR531c | Translation | 5.0 | 23.714 | 1 | 24 |
| Osa05LNT0299900.1 | osa-miR531a | Translation | 5.0 | 23.714 | 1 | 24 |
| Osa05LNT0299900.1 | osa-miR444b.2 | Translation | 3.5 | 23.896 | 1 | 21 |
| Osa05LNT0299900.1 | osa-miR444c.2 | Translation | 3.5 | 23.896 | 1 | 21 |
| Osa05LNT0299900.1 | osa-miR1435 | Cleavage | 3.0 | 15.13 | 1 | 20 |
| Osa05LNT0299900.1 | osa-miR1865-5p | Translation | 5.0 | 21.982 | 1 | 24 |
| Osa05LNT0299900.1 | osa-miR2092-3p | Translation | 4.5 | 21.817 | 1 | 22 |
| Osa05LNT0299900.1 | osa-miR2877 | Translation | 4.5 | 16.903 | 1 | 24 |
| Osa05LNT0299900.1 | osa-miR5154 | Cleavage | 4.5 | 15.074 | 1 | 24 |
| Osa05LNT0299900.1 | osa-miR5498 | Cleavage | 4.5 | 11.625 | 1 | 21 |
| Osa05LNT0299900.1 | osa-miR1423-5p | Cleavage | 5.0 | 14.064 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0299900.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0299900.1 | 5 | qTHJ-5 | Morphological trait | Seed | RM289 | RM249 |
| Osa05LNT0299900.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0299900.1 | 5 | nt5.1 | Morphological trait | Culm/leaf | RM169 | RM249 |
| Osa05LNT0299900.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0299900.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)