© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0300000.1
TCGGGAAAAGTCGGATAACGGGTGAATTATTTGCATGCATGATACATGACCTGCTATGCTCGTATCATTTGTACATTGTAACCACTAACCAGCACAGCTTCTTTCTGTTTGAGATGCACTCAGAACTCCGTGGTAACTCTAAAAGCTTTACTCAGCCGACCAACAAAGATACAAGCGCCCAAATCCAGAGAACCAGCAGGAGAAACAGCGATTTATGTCAAACCCAAAAGACAAACCACTATGGGTCTGATCTTACCTTACAAATGCAATAAATGAAGAAAAAGAAAAGAAGGAAATAAGATGATCTGAACATGAAATGTTCCTCCCCTTCTGATAGCCTGTGCCAAGCCAGAGAAAGAGTGGATGGGGCAGAACAGGAGAATAGAAGGAAAACATCGGTGGAGCAGGAAAGGGCTATCTATATGAGGGAAGCATTATCCATACTCCCTATGGCTTACTTTGCATTCCTGTAGCGGTCCAATACTTCATGTCGTTGCAAAGGCGAGACAGACAGCAACCACTTACTAAACTCAAGGTCGTTCATACCCATGAAAGATGCAATTCGGCTGAATTCCTTCTTTTTCTGCACCAGTGAGTAAGATTTTGCCTTAATTGTATGCATTGTTTCATTCTTCTTACTTTGCAGCTCCTCTAAGTGCCTTGGGACAGTTTTATCTTCTGCACAGTTGCTTGCTTCATTTGTCCTCGTGTTTACAACATCTTCATTTCGGTGAGCATAAACTATTCCACAATGGTACAAATTCTTGTTCTCGTTATGTATTGCTGTCATTGAGGATTTCATTTGATCTTGCGTACCAAATATATTTGTATCAACTATTTCTCGAATTCCTATTGTTTCAGCTGTATTACCCTTCCCATGTTCTCCATGCATTTCAATGATCTCACTGGTGAAAAGCTTATCAGACAAGTCGCGAAACAGATTGCATATCCCAAAGAGCTCACCTTGAAATTTTTTGTCATCCTGCACTCCTTCAAAGTAACGTTTTTCTATTTTTCCAGAGACCGCAATATTGGAAAGCTGTTGCTTATATATTTGTCGAGAATAAATAAGCTCTTCAAGGGAACCAGCACCAAGTAGGCGAAATACAGTGACATGCCGCCTCTGTCCAAATCGAAATGACCTGTCTTGCGCTTGCAAGTCTTGCGCAGGGTTCCAACTTGGGTCAAAAATCACCACACGATTAGCACTGACCAGGTTGACACCTAAATTTCCTGCCCGTGTAGATATAAGGAAAACCTGTTTGCTTGGGCATCTATTGAACTCATCAATTAGTAATTGGCGTGCATTCATGGGAGTCGTTCCATCAAAGCGAGAAAAGCAGTAACCCTTCCGTATAAGAAATTTCTCTAGTATGTCAAGCATCCTGACTGAATAGCTGAAAAGAAGAATTTTGTCACCCTGCAGAGTCCATAATGACAATAGTCTTTCCAACGCACGCATCTTTCCACAATGTTCTGCATCACTGAGACCCATGAAGTTTTCACTTTTAGCACCTCCACCAACTAATTCAATATCTGTGTCAAAGACAGCAGCTGCAAGCTCAGCATCTTTCTTCTGCTTCTCAATTTCGTCTTTCAGGTTTGGCTTTATCAGCTCCAGATGGTTACTGATCTATGGAAAATTAGTGGGGAATTATTAAAAAAACATAAATCTTTCCAAAATATTTTAAGAATATGAAATAACCTGCTGAAGCTTCCCAAGGCAAGGAAGAACAAGACAGAAGGGGCACAGAGAACAACCCTCTGGATTGTCTCTGTGAAGATAAGACCAGATAATGCCATGTGGTTCAGTTCTCTTGCAGCATTCCACCTGAGTCAAAGGACTTCCACAGCTACATGGGAGATCCTTGTTTATAAGGATTTGCACGTCAGGCTGTTGCAGCATTCTTCTGTAAACGCGCTTTTGAACGTCACTCATTCTGCAGAAAACAATATTATCCTCCTTTCCAAGCATGAGATGCCCAATGGTCTCTTCCTTTGTTCTTCTCAACAGAAATTTGCTAAGAACTGAAACAAGGTGCTTCTTGCGCTTATCAGCAACTTGTACAAATCTCTCAGGAGCACTGAACCTCTGGCCATGTTTTAAAGGCTCGTCATAATATACTCGAAAGTGTTCTCGATCCCCCAAGCAACCAGGTACAATCCAGTCAAACAGATTAAATAATTCCATTATTTTATTTTGCATTATGGTTCCTGTGAGACCAAACCGCTTTCGAGTAGTAATTTCCAAGCAAGCTGTATATAACTTTGATTTTTCATTCTTCAGCCGGTGTGCCTCATCAACAACCACAAGGTCCCACGAGATGCCACACAAAATCTTGCCATGAATCCTAAAAGTGTCAAAACTGGTAATAACTATCTCTAGTCTTTGAGTTTCAACCTTTTGAAGAACCAGGTCACGATTTGGGCCATGATAGACAGCAACAGAACATCTTGCCCACTCTGCAAATTCATTTTCCCAGTTTCGAATTACTGATGTGGGGCAGAGGATGAGTATAGGGGCAATCTTTCTTCCTTCCACTAATTGATCACCGTGGTCATTATCTTTTCCAATAACAGCTGATAAGAAAGCAATTGTTTGGATAGTCTTTCCCAAACCCCTCACATGTCATCTCCAAGCACACCGCCATGGTTGTTTCTATACAGATTGTATAAGAATCTTACACCATCCCTCTGATGCACAAGTAGCCTGCAATTTATCGAGGAGGGTACCTGGACGACGGGGCGCTCTCCGGGCGGCGAGAGAGCAAGCGGTTCGTAGGGCCCGCGGGAGTCGAGGGAGGCCGCTGGCGGAAGGGAAGCGCGGGGGCGGATGCAGGGGACCTCGTCCTCCTCCTCTGGCAGCGGCGGCGCATCATCCGCCGCCGCATCCGAGGTCGGGGAAGTGCGAGGGGGCGGTGGCGGCGAGACGGAAAAGGAGGAAGAGGAGGAGGAGGCATCAAGGCGGAGGAGCTGCTGCGAGAGGGACGTTTTTGGGGGCCTCCTGGCGAGGAGAGGAGGAGGTGATCGGGGTTGGGACTCGGATTGGGGCTGTGAAAAGGAGGAAGACTGGAGGGTTTCTTTGAGGCTGTGGAGCGACATGGCGTTGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0300000.1 | 5 | 8967737 | G | A |
| Osa05LNT0300000.1 | 5 | 8969749 | T | C |
| Osa05LNT0300000.1 | 5 | 8971169 | T | C |
| Osa05LNT0300000.1 | 5 | 8967233 | T | C |
| Osa05LNT0300000.1 | 5 | 8968867 | T | A |
| Osa05LNT0300000.1 | 5 | 8968994 | A | T |
| Osa05LNT0300000.1 | 5 | 8970070 | T | C |
| Osa05LNT0300000.1 | 5 | 8970112 | T | C |
| Osa05LNT0300000.1 | 5 | 8972573 | A | T |
| Osa05LNT0300000.1 | 5 | 8966562 | T | A |
| Osa05LNT0300000.1 | 5 | 8966496 | C | T |
| Osa05LNT0300000.1 | 5 | 8969184 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0300000.1 | osa-miR408-5p | Cleavage | 4.5 | 12.496 | 1 | 21 |
| Osa05LNT0300000.1 | osa-miR444a-5p | Cleavage | 3.5 | 9.214 | 1 | 21 |
| Osa05LNT0300000.1 | osa-miR444d.3 | Translation | 5.0 | 11.848 | 1 | 21 |
| Osa05LNT0300000.1 | osa-miR1877 | Cleavage | 4.0 | 11.716 | 1 | 24 |
| Osa05LNT0300000.1 | osa-miR2875 | Translation | 5.0 | 10.171 | 1 | 24 |
| Osa05LNT0300000.1 | osa-miR2923 | Cleavage | 3.5 | 15.626 | 1 | 22 |
| Osa05LNT0300000.1 | osa-miR395x | Cleavage | 4.0 | 15.751 | 1 | 21 |
| Osa05LNT0300000.1 | osa-miR5338 | Cleavage | 3.0 | 14.599 | 1 | 21 |
| Osa05LNT0300000.1 | osa-miR5522 | Cleavage | 3.5 | 8.007 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0300000.1 | 5 | qTHJ-5 | Morphological trait | Seed | RM289 | RM249 |
| Osa05LNT0300000.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0300000.1 | 5 | nt5.1 | Morphological trait | Culm/leaf | RM169 | RM249 |
| Osa05LNT0300000.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0300000.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0300000.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)