© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0300500.1
CTTATAATAGCCAATAAAAACCAATGGTCATCTAATACAGTGCAAATACATATGTGCCAACCCAGTCACATATTCAAATACAATCACAGTCACAAGTTCACTGACCATGAATACATTACAGATTAACTAGCCAAAACAAAATACATCGGCACATAATCAGGTTCAGTACATTAGTACTGACTTAACACATAATCACATGTCAAAATACATATGTACCAACCCAACCACGTCCAAATACAATCTCAGGTTCACTTACCAAACACAAAACCATGTGTCGAAATCACACCAACCAAAATACCACTGCCGTCTCATCATGAATCATCAAGGCGACACGAAGAGGATGGACAAACCTTACATCTGTATACTCCATCTCGAAAAAAATGCAATTCTTACTCTAGGCAGCCTATACATTACCCTGTAGAAACCATCCAAGAAGAAACTGGATGAGAGCCTCCTCGCCAAGTTCATGTCTGCCAAAGTTTCCCAATGACCAGTCTCTGAATTGTACAGCTCGGCAGATTTCAGCACCTGTCCATTCTTATCACACCCACCAGCGACAATAGCAATTTCATCAAAGCTTCCTGAGGCAAAGAGCACTACTAGACATTCAATTATTAACGATGAAGAGTAAACAGTCCTGGTCGTTACAGACTTACAGTTAATTCCAGCTAGTTAAACCAAAACTGACGACCACCATATTAGTCCTTGTTAAAATTATGTGGTATACGGTCGTTATTTGGGCATCTACTTCTCCCCATATTTCCTGACGCAGGTGGCCCATTAACGTGACCCTTTGAGGAGCCCAACACACGCTGCTAGATCAAGTAAGTTTGAGGTAATCTTAGAGCAGTACCTATCCTAATTTTTAATTCAGTTTGGATGATATTAGTTGACGCCTAATTGCAAGATTTTGCTTGATCCAAAAGTTTTGCAGTTATTTTCCAGAAATGCTGGACCACCAATTCAAGCAAATGAGCAGAGTTGCAGCAACTCTTCATGTCCTCTGAACTCTCCCACTAGTAGCACACAAACATGAAGAATTGACAGGTTTGCGTTTATAACAAGTTGTGTACTATGCACAAGTTCTTGCAGTAAATATATGCAGTTTGAATGCTTCAACCTTGCGCAGAGTCATTACTGATTGCTAATGCTGCCTACTTCAATACTACTTTGAGAAATAACTAGGTACAAGTTAAAGATTTCAGTTTGCTTATGGTTCATGGATTATTGTAGTTACCAAATGAGCATCCATTAAGTAAATGGTTGGTATTCTCCTCACCTTGCTGCCTGACATGTTTGATTTCATTGGAGTGCATCTTGTATATTGATAATGAACTGCAACTTCTTTATCCACTGCTTCCATCTAAGATGTCCTGAGAGCACAAACTTTTTAACATTACCTAATTATTAAATCAATGGGCACCAAGAACATAATGAACCCAGATCATAAAAAAAATCTTTGTTTTCTGTGAAAATCTTCATTTATCTGAGAAACGAAGAAGGCGACGCCAAAGACGAGCCGTCGAAGTCGGCCCAGGTGACCTCCGCGTCGTGACCCGTGCTTCCCATCCCAGAGGTGACCACGGCGGTGACATGGGGGCAATCTCAACAGGTCAAGTCAGCTTCGATCAGAGGAGGTACCAAGGGGAAAGAATAGGGGAGGGAGGACGGCGGCGACGGGGGAGGGAAGGAGGGGGCGAGGGTGGCCGGGCGGCGGCGCTGGAGTTGGGTGGGAGGCCGAGCCGCTGCCGCCGCGGCCCGGTGGACCCCCTCCGAACCCGCACACAAGAGGCGCGACCTCCGGCGCCGGTGGGTGCGGAGGCGGATGCCGAGGCGGCGTGGGCTTCTCCTGGCTCGCCATACCACCTCAGGGCCTTGAATCCTTGATCCTTCAGCCGCTTGGGTGTCGGACAGCCTTCCCGACGAAGGACCAGCGGAGATCGAGGCTGCCCTTCCGAGGACGGCGCCGCCGGATCCGCCGCCGCAGGCTGTCGCCGTGCCCGCCACCCGCCACCGTCGTTGCCGTGCCCGCCGCTGCCGGGGCCGCCACTCCCGCCCGCTCCCAACCTCCAGTCGGTGAGAGAGAGAGGAGAGGAGGAAAGAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0300500.1 | 5 | 10532569 | C | T |
| Osa05LNT0300500.1 | 5 | 10533135 | C | T |
| Osa05LNT0300500.1 | 5 | 10533640 | C | T |
| Osa05LNT0300500.1 | 5 | 10534378 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0300500.1 | osa-miR5516b | Cleavage | 4.0 | 11.945 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR398a | Cleavage | 4.5 | 10.367 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR398b | Cleavage | 5.0 | 10.367 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR444b.1 | Cleavage | 4.5 | 15.11 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR444c.1 | Cleavage | 4.5 | 15.11 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR1868 | Cleavage | 5.0 | 13.281 | 1 | 24 |
| Osa05LNT0300500.1 | osa-miR1872 | Cleavage | 1.5 | 14.117 | 1 | 24 |
| Osa05LNT0300500.1 | osa-miR2055 | Translation | 5.0 | 18.905 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR2097-3p | Cleavage | 4.5 | 16.671 | 1 | 22 |
| Osa05LNT0300500.1 | osa-miR5075 | Cleavage | 1.0 | 8.337 | 1 | 21 |
| Osa05LNT0300500.1 | osa-miR5516a | Cleavage | 4.0 | 11.945 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0300500.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0300500.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0300500.1 | 5 | qTHJ-5 | Morphological trait | Seed | RM289 | RM249 |
| Osa05LNT0300500.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0300500.1 | 5 | nt5.1 | Morphological trait | Culm/leaf | RM169 | RM249 |
| Osa05LNT0300500.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)