© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027000.1
GAGAATGGGAACAACATTAGCATTGAATATTAGCAAAGTGTACATTTTTTTCCCCTAGGTTACAATTGTTTGTTGCACCAGAGATTGGTAATGTTTACACTGTGATTTGCTAGTTGGTTAAGAAGAGGCTATTCGAGATTCAAGAACGCCATTCTCATCGTCTGATGGACTAAGTATGCGTATGAATTGTATTTACACGTGTTAACATCATGAAAAAAAAAACATGCAACACGTCATATATCCATCTCGTCGTCATCGTCAACTTCATCAATCCACTCGACCTGAGAATAGGCCGCTGATTTCATCAAGTCAGTAAGGCCGGTGAGGTCTTCCAGATAGGTTGGTTCGTTGATCACCTGCATCACAAAATCCATCCCTCTCCTATGGTATTCAGACAACACTGCATTGGAACATGCGGTACAATTGCTCGAGGAATAGCCCAATAGGGTTAGTAAGTTGTACTGCGAGAGTGATCCTCGTATCTGATGCGGCAATAGACCAAGTGGACCCTCACTGCTTGTGCCAGCAATCTCTCCTGGAGCATGGATCCCATCTGGATGATGTAACATTCTTGTGAAGAGGTCTGCCGCACAGCCAGATGTAATGGAGGACAATCCAGGCCGTGTTACTGTACATTGTTGATCCAGTGTTCGGTTGGACACGGAATCAACAGGAGCAACGACGTCATTGCAGAAATAACATCCTAGTCTCTGACGACCAAGAACATCTTCTGCAGACAGTGTATCAGCAGCAGCAACCACATCTGGACTTCCACAATTCGTGCCTGGACCAGCCCCATGTCGCATGACAAGGTAACTGTCATATCCTAATGCTGCAGTAATAGCAATCTTGTTTTCATTTGCGCAGAGAAGTGTTGGAAGCCACCTACTTTCCCTTGTGTCGGTCAGCAAGAAGACAGCATCATGAGAAGATACCAACTCCTGGAGGCGTTTGCAATCTTCAAGCACACTGACTGCTTCATTAGGTGATACAGGATGGCCTGGCATTGGTATTTCCATTTTAATTCCTTTTGCATCCACTGAAGGACATCTCTCTTTCAAACGCCCTAGTATTGCTGATGCTTTTGGGCTGTCACGATCATCAGATGTGTAGAGTGACTGTCTTGCCAAATTCGACACAACAACTCGACCACTGTCAACTACTGTTAGTTTCCGCACACCACAGTCCATAAGAATACGAGCAACATCACATCCAAGTGTTCCAGCACCTAAAAGTAGACATCGGGCACTGGACAGCTTCTCTAGGTTTACAGGAATGCTGGCCGAAGTTTTAGAAACAGGAATGCTGGCTGAAATTTTAGAAGCAAATGGTTTTTTCAAATCAGATATGCCTGTAAGGTCTTTCAAATATGTTGGACAGGTGATGGCCTGCGTTACAAAATCAAATCCTCTTCTTCTATATTCTGATAAAACAGCATTGGAACATGCAATACAGTTGCTTGAGGAATTGCACAGCACAGTTGACAAGACACACTTTGAGAGCGATCCTTGCATCTGATGTGGCAATAGACCAAGCTGATGCTCAGTGTCTGTACCAGCAATATCTCCTGGAGCATGAATTTCATCTGGATGATGTAACATCCTAGCAAAGAGCTCCACTGCTTTGCCAGATGCAACTGAGGTCAGCCCAGGTAATATTACTGCCGACTGCTGATCCAGTGCTCCATTATGATCTGAATTAACAAGGGAAGTAGTATCACTGCAGAAACAGCAGCCCAATCTTTGCCGACCGAGAGCGTCTTGTGTGGACAAATTCTCTATCTGAGCAATCCCTTCATCCATACCTCCACTTTTTGTTCCTGGACCAGCACCATGTCGCATGACAAGGTAATTGTCATATCCTAACAACACAGTAATGGCAATCTTGTTTTTGTCTGCACATAAAAGAGTTGGAAGCCACATTCCCTCCCATGTTTCATTCAACAAGAAGACCACATCATTGGAATCAACTAATGTTTGGAGACGCTTGCAATCATCAGTAATACTTGATATTTTGCTGGCAGAAATATTATACTCAAGCTTTGGTATTCCCATTTGGATGCCTTCAACTTCCACCGCAGAACATCTTTCTTTTAGATGTGGGACTATTGCAGTCACTCTTGGGACACCACAATCCTTATCCGTGTAGAGGGATTGTTTGACTAGATCAGACATGGAAACGCAACCATCATCAACCACTGTTAGTTTCCGAACACCCCAGGTCATAAGTAGGCGTGCGACTTCACATCCAAGAGTTCCAGCACCCAACAAAAGACAACGGACCCCAGCTAACTTGTCAAGATTCACAGGGAAGTGGCGCCATCCCATAAGCTTCAAGTGCATCAGCTGTTTTTCTTCATCTTGACTTGCTGGATTAATTGAAGAAAGATCAATTTCTTTCGGTTTCATCTCTTTCGATTCCTTCCCGGCCGTTTCTCCTTCCCATCCAATTGCTTCAGGCACATAATCAGGTTCATCCCAGCCATGAGGTGCCGGAAATGATGCTTCGCCGACAAGGGACTGCTGTATGTCAGGACGTCCTCGTTTTTCTCGGTAGCAGAAAAAATGAACTTTCTCAATCTTCCAACGCAGGCTCACGAATGCAATATAATTTCTAAGAGCCCATCCAGGAAAACCTCGATTACCATGATCATAAAATCCGAATAGCAACTTCTGGCCATTGCCCTGGCAAGCTTTCCAATCCTTCAGCTGTCTTATAGTAGCAGATGAATCTGGGGATATATTGATCAGAAAGAATGGAACAACTGTTGTTTCACTTGATTTACGCCACTCAGTAAATGCATTAGACAAGGATGTTGCCTCTTCTTGCTTAAGCACTTGTGAGGCAAGTTTCAAGCTGAGCAAAGTTATCTTGGAGTCAAAAATCAACGAGGGGAATGCGACATTGTAATATACTTTCCAATTCTTCAGATCAGCAAATGATATCACAAGGAACCTTAGTAGCAAAGCAGGATTCTCTTCTACTTTGCCAGATTTAATATCATGCAAGATCTTCTTTGCTTCAGCTTTCAGTAGAAGTGCTCTGTCCAAGTTTTGGAATCCTCTCATGTTATTAGTGTTTAGTAGGGTCCCTGGGACTGGACAATTGTTCCTATCGCCAAAGGAATTGGCAGAAGGTGGCAGTATCGATTCTGGGCATATCCTAAAGAGGCTTGCAATTTTCTCATATTGGCGTGGAGTATAATAACCGGTGATGGGGATGGGGGAGTCGTCGGTGCCGAGGACGTCCAGCTTGAGGCGGCGGAGCGCGTCCCAGAAGCCCGTCTCCGCGCAGACGCCGATCGCCGCCGCCTGCAGCGGCCGCGGCGCCGCCGCCGCCGCCTCCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027000.1 | 1 | 24380872 | A | C |
| Osa01LNT0027000.1 | 1 | 24381241 | C | T |
| Osa01LNT0027000.1 | 1 | 24381562 | T | G |
| Osa01LNT0027000.1 | 1 | 24381890 | A | G |
| Osa01LNT0027000.1 | 1 | 24382181 | C | T |
| Osa01LNT0027000.1 | 1 | 24382597 | C | T |
| Osa01LNT0027000.1 | 1 | 24383276 | T | C |
| Osa01LNT0027000.1 | 1 | 24383518 | T | G |
| Osa01LNT0027000.1 | 1 | 24383599 | A | T |
| Osa01LNT0027000.1 | 1 | 24383932 | T | C |
| Osa01LNT0027000.1 | 1 | 24386117 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027000.1 | osa-miR7694-5p | Cleavage | 4.0 | 22.451 | 1 | 24 |
| Osa01LNT0027000.1 | osa-miR166c-5p | Cleavage | 5.0 | 24.495 | 1 | 20 |
| Osa01LNT0027000.1 | osa-miR169p | Cleavage | 5.0 | 12.411 | 1 | 22 |
| Osa01LNT0027000.1 | osa-miR439a | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439b | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439c | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439d | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439e | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439f | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439g | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439h | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR439i | Translation | 5.0 | 15.181 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR1432-5p | Cleavage | 3.5 | 14.637 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR1850.2 | Cleavage | 5.0 | 14.324 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR2093-5p | Translation | 5.0 | 12.787 | 1 | 20 |
| Osa01LNT0027000.1 | osa-miR1863c | Cleavage | 4.5 | 16.879 | 1 | 24 |
| Osa01LNT0027000.1 | osa-miR1863b.2 | Cleavage | 5.0 | 16.833 | 1 | 23 |
| Osa01LNT0027000.1 | osa-miR5073 | Cleavage | 5.0 | 11.839 | 1 | 23 |
| Osa01LNT0027000.1 | osa-miR5339 | Cleavage | 3.5 | 14.857 | 1 | 21 |
| Osa01LNT0027000.1 | osa-miR5497 | Translation | 5.0 | 13.726 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027000.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027000.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027000.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027000.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)