© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0301400.1
GCACATCGCGGCGCCCCTATCCCGTCAGCCGCCGACCCGCGCACACACCCATCACGCCCCTTCCCTCCCGCTTCCCCCCTTCCCCGCTCCCCCGCCGACGGCAGCACCTCCACCTGCGCCACTGCCGGATCGACGGGAGCCGCCGATCGTCCTCCTCCGCCAAACACCAACCTCGCCGCACAGAGCCGCGTCCCCATCCCATCAGTCGTCAGGCCACCTGCGTGTTCCCCTTCCCCGTCGCCCGGGCCTCTCCATCGGTGATCTCCTCCCTTCTCACCCTCAAACGCCCCCGTCGATTCCCTGCAGCCCATCGTATCCTAAAACCCTACAACCACTGACCCACATCGTCTGTCGCCGATCAGCGTCGCCGTTTGTTCACAAGGAGAGCGGCAAAGGAGGTCGGGACTCGGTGTAGAGCGACGAGCCCAGCGAAGTAGGCCGATAGCTATCCGCCATAGCAGTGATGAAGGCCGGCTGGTGGAGCGCCCCTGTCAGCGCAGCTTTGCACGGGATCTCGCGCGGCCAGACATAGGAATCGCACAACCTTCTCAATCCCGACGCTGCGCCCCGATCGTCGCCGCTCGCCGTTGGAACCGGCACCACGACAGCCGGGAAGGAACCAGAGGTGCATCGCTTCCAGCACCAGCGCTCTGTCCCTGCATCTTCCATCCCCGGGAAGTATATAGCTGTTGGAAAAGATCACTGTTCTTTGATAGCTCGTAACACACATCTGTTTGCAATTGGGGTCAACGAAGAAATACTGAGTTGCAATTACATTGCAAATGCAAGTGGATATCAACACTTCTGTACTGTCAAAGTTCCACTCGGATAGCTGCATAATAGAAGCGGCATCATCTTGCAGCCAACTTGCTGACCATTGCGGCTTTTATTTTAGATGACAGAGAAGGACGAGGTGATCAAACTGGCATACTGCCACTAAACACAACATATTTGAAAGAAGCAAAGAAACAGGTGGCATCAAGCTTTGCTGCTGAAGGAGGAATGGAGTGAACTGAAGCAATGTAATGAATTTGTACGGTGAGGAAGGCTTGGAAAGAAACATCGGTTAAAATACTTCCTCTGAACTTTTGAATGTCCAAAGTGGAACATATGAAGAGTACAGTAGATGAAAAACAACCTTGTGAGCCCAATATTTTAACTGTCACATCAGAGCCTTTGGGAGAAAGGAACCTGGTTATGAAACCGTTTCTTTGTGTAAAACATGATGTAAAGCTTCCAAATCCAGAACTACGCATTGCTAGCTGTTGGTTGTGCTCCATAGGCTGTGTTTAGTTCCACGCTAAAATTGGAAGTTTGAAGAAATTGGAACGATATGACGGAAAATTTAGAAGTTTGTGTGTAGTAAAGTCCGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAAGTTGGAATCTAAACAGGGCCATAATAATATATCTGAGGGGCGGATGCTTGTTTTCATGTCTTTATGAAACGTATCGTCTTTCAGTTGTTTGATTTGCATTATCAGTTATCGTAGTGTTAGCACGGGCATATTACTAGTATTAATCGTATAAATACCACATACTGCTAGCATCACACTATATGAGAGTATTAATCTTTGATATTGTTACACCTACATTACTCATGAGATGAAATTAATGGTTGGATAAACTTTATATTACTCATCATCTGTACATACTAGTATTTGTCATGCTATGCTCTGAACAAATTCCTTACATGCTCTATTGTTAAGATATACATTCTAATAAGCTTTAGGTGCTCAGCATAATTTCCTACAGAATGTTTCTGCTGCATGTCCTCCTATGGTCACTTGATTAAATATGAACTACTACTGTCACCATATACCAATTTATGTATTCATAATCAATCTAATAGGTTCTTCTTATCTCTATTAACCAAATACATGTACAGTATTCAACTCATATGCATTTATTTCTATGATGTTTCTGACCAATTTAAAATGTGCCTTGATGTTGACTAGATAATAGATGATCTACCTGCATACTCTGTTCAGGGTAAATTCTAAATCAAAGTCTGATTCTAACATTTAAATTTTTTCCCACATACTATGGGTAATATTTTTGCATGAATAGTAGGGTCAAGTCCTGATATTAATGCACATTAGTCTAATTAAATCCTTATATAAATGTTTACTGAACTGACTAAAATTCTATAATGGTAACACATTAGCATGATCAAATCCTTATGCTACTATTCAGAGCATAATACAGGAAATTAATATGAATTCCTACATACATGATGCATTATGGTAGTATGAATAAAGTGATCAAATGACCTACAACAATGAATCTTGATCTGGCTTTCAAAGCATTTTGATTACTAAAATAACAGGCAAATGATGCTCCTATGGTGTTGGTCTTAGCGATGGAAATACTACAATCTGACTTTGATGTCATGCTCTTCTAGAATCATTTGCTCTATATGCTCTGCTATAGAGGCCTATAACTCTGTTCATTAATTCTAACGATTCAATTAGATTTCCTTTACCGACCTACTATGACACACTGCATATATTTTACTTGACATAAACCTGAACAAGTGAGATTAGGTGAACCTTTGTTCAGTACTGAAGGTTATTTTATTTAAGTTATAACTAAATTCTAACTATTTATAATTTCAGGATTCACCAAACAGATGCACATGCAGCTGTTTACCTAAATGCATTTACATAATGATTCTAGACAAACTAAAATGTTTCTTGTTGCTAACCCCAAATAATTATAAACTAGAATTAACCTATTTACCTATCAGTTAAAATAAAAATATTTATGTCCTACTAGTTACACTTCCTACTCTGCAGCTCAAATTATTAATATGAACATTTTTACTGGATCAGGGATGCACTTGTTCATCGTTTAGTGGATGCAAAAGCAACACATAGCTCCTATACAAACTAGTAAAATGCATCACATAAAAATCATGCCATGATATGGTTTTAGTTTCATTTTAATCTTAGGATTACCTTGTTAATGACTCTAGTGTGGCTGTGAAGGTTGTGTGATTTCTCATGTTGGGACTGTAGCTTCACTCCCTTACTGGAACTGAAGCTCTTGAATATTTCTCCTCCTTGCTAAAGCACCAGCTACTCCTCCAGAAACTGAAGTATTTGGACACTTCTTCTTGAGCTGGACTGCTGGAACACCACTTGCTCCTTCACTTCAGCATCTTCTTGCTACTTTGGTTTATATGGTAAGATATGTGAAAATCTTAATTGGCATCTGGATCTGCTACTTTCCTTGCTCTTCCTGGAGTTGATCCTCTTGCTTGATTGCTGCTCCATCTTGCTTGAGCTGCTACTGGTTACTACTCCTCTACTACTAATCTGACCTCTCATTCACTCACCCTAGCCTCCCCTGGTTGCACACACAAGGTTGCTACGGCTGTGGTGATGCATGGGTGAGATGTTGAACTAGTGATCTGCTAGCTGTGATTATTCCTCTTTGACTTGAGCAGAATCCCCAACCGAACTGATGTTGGTGACTGCTGTTGCGGCAGCTGCTGCTATTGTTCTTTGCAGTAGAAATTGGTGGTACTATTGCTGTGGCTACTGCTGACCTCGGTCTCTACGATACAATAGCTTGGGGAGGAATGAGTTCACACTGCAGTAGTCATCTTGGTCTTCCTTAAGTGACTCACCTACTTGGGGCTGGTTGTCTGCAGCTAAGCTTGACACCTAAGCAATGCATGCTCGGTGGAATGATGGATAGAATTTTACTAATTTTCAGTTTAAATGGAAAATCTGGTAAAGTATGATATGTTTGATACTTTTGCACATGAGTTCCTCAAGTCTGGTAAAATTGGAGGTTACTATTAGTTTAGGGACTGACTTTTAATTTATTCTATAACGCACGGTCCCTTTTTGAAATATTACTAATTACACGATATGTTCTCGGCTAATGTATTTGTACAATATATGAAATGCATACTATATAAGATTTCTAGTGTACAATTATATGCATGTATGTATGCAGACGTGTAGTAGTAAATTGTAAATAAAGAACTATGATTTCTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0301400.1 | 5 | 13007031 | A | G |
| Osa05LNT0301400.1 | 5 | 13007424 | T | C |
| Osa05LNT0301400.1 | 5 | 13009891 | A | T |
| Osa05LNT0301400.1 | 5 | 13010031 | A | T |
| Osa05LNT0301400.1 | 5 | 13010060 | G | T |
| Osa05LNT0301400.1 | 5 | 13011354 | G | A |
| Osa05LNT0301400.1 | 5 | 13012518 | A | G |
| Osa05LNT0301400.1 | 5 | 13012670 | G | A |
| Osa05LNT0301400.1 | 5 | 13006732 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0301400.1 | osa-miR5537 | Cleavage | 4.0 | 10.098 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR5796 | Cleavage | 4.5 | 17.864 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR5799 | Cleavage | 5.0 | 11.933 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR5821 | Cleavage | 4.5 | 19.975 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR5512b | Cleavage | 4.0 | 15.722 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR818f | Cleavage | 3.5 | 11.052 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR5079b | Cleavage | 4.0 | 17.892 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR166i-3p | Translation | 4.5 | 12.374 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR417 | Translation | 3.0 | 11.922 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR1442 | Cleavage | 5.0 | 16.529 | 1 | 20 |
| Osa05LNT0301400.1 | osa-miR1850.2 | Cleavage | 5.0 | 21.453 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR1850.3 | Translation | 4.5 | 13.057 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR1879 | Translation | 4.5 | 8.92 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR812g | Cleavage | 4.5 | 11.933 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR812h | Cleavage | 4.5 | 11.933 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR812i | Cleavage | 4.5 | 11.933 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR812j | Cleavage | 4.5 | 11.933 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR2101-3p | Cleavage | 4.0 | 14.26 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR2102-3p | Cleavage | 3.0 | 23.037 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR2104 | Translation | 5.0 | 23.371 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR2874 | Cleavage | 4.5 | 16.052 | 1 | 24 |
| Osa05LNT0301400.1 | osa-miR2931 | Translation | 4.5 | 17.647 | 1 | 20 |
| Osa05LNT0301400.1 | osa-miR5073 | Translation | 4.0 | 12.206 | 1 | 23 |
| Osa05LNT0301400.1 | osa-miR5079a | Cleavage | 4.0 | 17.892 | 1 | 22 |
| Osa05LNT0301400.1 | osa-miR5490 | Translation | 4.0 | 10.074 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR5508 | Translation | 5.0 | 20.668 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR5512a | Cleavage | 4.0 | 15.722 | 1 | 21 |
| Osa05LNT0301400.1 | osa-miR413 | Cleavage | 3.0 | 17.113 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0301400.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0301400.1 | 5 | qLTG-5 | Resistance or Tolerance | Cold tolerance | RM249 | RG13 |
| Osa05LNT0301400.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)