>Osa05LNT0301800.2

TTCTCCAACAAAAGCTTGGACATGCAGTATACCAAGGTCTCTAAAATATTACATGGTCATGTCATAAAGGTTCAAATGACCTCACAACACCAAAATACATATTGACGGTACCAAAATACATTATAGTGCATCAGCACTCATCACAGTGCATACTAACACAGTCCTAACATGCAAATTAACTAGAGCAGTACTCCAAGATATTACAGTACCAAGCTAACTTCCAAATATTACAGTACCAAAATAATTCAACACATGCTTAGTATAAATTAAAATCTAGAGATTTCTTCTTTTTGCTTCTTGTCCCCATTGCTGGACTATCTGGAGTCACGGGAACAACTTTTTTTCGCTTGATTTGAGCCAAAGGTGTAGCATCAGTGCTATCTTCCTTGTTTTTCTTAGTGGCTACCTTGGCTTTAGTCTTTGTCTTGGGTTTGGCCTTGGCCTTGCACTTGTCAGGTGCTAGTGCTGGTAGTGGCATCAGCACACTCAAAGGTTCCGGTTGGTTGGATCCTGTCACTGATCTTGATCCTTCAGGAACCCAAGATTTGGGAGTACATTGGCTTGCCTTCTCTATTTTCCTTGTCATTTTCGTCAAGTCATCGCGTGCGCCTACCTCTTCCCGCCGCCGGCCTACTCCAGGCGCCGCAGCTCCTGCGCGACCGGCCGCGGGCCGCAGCCCTTCCAGCGACCGCCGCCGCGGCCCCTCACCAGCGGCCGGCCGTCACCCCCGCTCCAGCGGCCGGCCGTCGCCGCCGCCCCAGCGACCGGCCATCGCCCCTGCTCCAGCGACCGGCCGCCGCCGCCGCCCAAGCGACCGGCTGCCGACCTCACCTGCCGCCTGCCTGCTCTGACGCCGCCGCTCCCGTGCCACCCATCCAGCGACCAGCCCTCCCGCGGTCGCCCCTCCCGCAACCGGCCGCCGCCTCCCTGCTCCGGACTGCCGCCCTCGCCGCGCCGCCTGCACAACCGCCGCGCACAAGAGAATCGCGCCGCCTGGTCAGGGGAGCCGCGCCTCCTCTCGTCCTGGTCAGGCACGATCTAGGGTTTCCCCTATTGAGG

Explanation	CPC Score
noncoding (weak)	-0.77873

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0301800.2	5	13321950	T	C
Osa05LNT0301800.2	5	13320309	C	T
Osa05LNT0301800.2	5	13320294	A	G
Osa05LNT0301800.2	5	13321434	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa05LNT0301800.2	DTM_#DNAt_MULE_japo_Os0372	Chr5	-	13319815	13322669	2231

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0301800.2	osa-miR2866	Cleavage	4.5	7.943	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0301800.2	5	QKw5	Morphological trait	Seed	RG182	RG13
Osa05LNT0301800.2	5	qLTG-5	Resistance or Tolerance	Cold tolerance	RM249	RG13
Osa05LNT0301800.2	5	yl(t)	Morphological trait	Shoot/Seedling	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus