>Osa05LNT0302600.1

ACAAATAGGACCAACATAAACATTGAACACAGATACCAACTTCATTACAAATAGCCCCAACATCAACATTAACATTGAACACAGAAACCAACTTCACCGATGATCCCAAACTTGTGAGCCAGTGTTGCCATCACCTCCACTGGCAGCAGCAGCCATGGCCCGCCGAGCTCGACATCGACGATGTTGCCGAAGTCCTTGCTAACAACATCGATCCTCTGAAACACCTGCCCGAGGGTGATGGGGAGGAGCCTAGCAACTGTTGTGGCTGGCGGATGAGTGCTCGACCCATCGGCACTCCAGGGGAATCCACTTGAGCACCCTCCCGTCCGACACGCCCGTGTACGGGCCGTCGCCGTCAAACGCCACGCAGCCACGCTCTCCGGCCCAACCGCGGACCTGCTCCTGGGGGACCCTGCAGCCCTGCGCCGACGAGTCGTGCGGCCGCGCCAGCGCCGCAGTCGCCGGCTCGGCGGCTCGCCGCCGCCGCACCCGTACGCCTCCTCTTGCTCGGCTCCCGTGTCTAGGGTTTGGGTATTAGGTGATTAGGGTTAGATGGGGAGGAGAATTGGGGAAAATGTCGAAATGGGCTGAGTTGCTCCTGGCCATCGTGTCCAGCATCGGAGCTGCTCCGGATCAAGCGCTGCACCACCATATGGAGCGCTGCTGTGGATTATGGGAGGCAACATCAGATGAAGCAGCGAGTGGACGGAGGATGTAGCGGCGGCGGGAGGCGATGCGAGGCAGCAGAAAGGCGGGAGGTGGTGCGGGAGTACCGTCGCGGCTGCTTTCGGGGTGGGGAAGCCTGCCGCCGACGCCTAGAGAGGTGCCGACGCCGATCAGGGCTACCGGCCGCGGAAGCGAGATGCCGCCGCCGCCGCCGCCGCGGGTGTGGGGAATGCAGAGGGAAAGAAA

Explanation	CPC Score
noncoding (weak)	-0.839154

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0302600.1	5	13709162	C	A
Osa05LNT0302600.1	5	13709813	C	A
Osa05LNT0302600.1	5	13710485	A	C
Osa05LNT0302600.1	5	13711545	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0302600.1	osa-miR5795	Cleavage	5.0	19.374	1	22
Osa05LNT0302600.1	osa-miR5076	Cleavage	3.5	23.607	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0302600.1	5	QKw5	Morphological trait	Seed	RG182	RG13
Osa05LNT0302600.1	5	qLTG-5	Resistance or Tolerance	Cold tolerance	RM249	RG13
Osa05LNT0302600.1	5	yl(t)	Morphological trait	Shoot/Seedling	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus