© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0001500.1
GACCACCGGAAATGGAAATATATATATAGTAGTACTTCTGATCACAGATATGACAATTCAGATGGGTACAACATGTACACATGCCCAGCCATTTTGGCCATTTTCCAGCAAAAGACAGCGTATATAATCCACTAGAAGAATTCGATCAGTTTTCTCTTCTCAATAAAACAAGAACAACAAGAATTCAGTTTCACCCACAGCTACTTAAAGACTACAGAGACAGTGGTAGTAAAACTGACATCCTTGTGGGTTTCACAGGGAAACGATGACTTGTACAAGCCAAACAGAAACAGAAGTGAAGTGAAGTGAAGAGAAAATTTGCATAAATGAGAATTCAGACCTCGGCCTTGTGCTCGGGGCGATGGGTGAACTCGAAGTCGACGTGCACAAAGGCGCGCTCGACTTCGGGGAGTTGCTCCAGCTTCTCCTGGAGCGACTCCCCGATGTCGTGCGCGTGGCTGAGCGGCATGTCGCCGGGGAGGACGATGTCCACCTCCACGAAGTAGTGAGTCCCGAAGGTGTAGGCCCTCACCGTGTCGATGTGCCGGATCTCCTCGTGGTGGTTCCATATCAGGTACGTCAGCTTCGTCAGGTACTCCGCCGGCGCCGACCTGCCGATCAGCGTCCCCACGTTCTCCACCACCGTCCGAGCCCACGTCGTGATCGTGTACACCGCGATCAGTATGGCTCCGACCGGATCCATCCACCATTTGTACCGGACGGCGAGGAGCGCGCTGACGAGGCCGACCGAGTTGGTGATCACGTCGAAGAAATGGTCCTGCGCGTAGGCTCTCACGATCTCGTTCTTGAACGACCGGCAGTAGAGCATCAGGAAGAACTTCACCACTGCGACTGAGGACATGCTGCCGATCATCCACAGCTCCTTCCTGTGGTCGAACACTTGGTGCTCATTTGTGATAAGCTGACGCCCGGATTCAATTAGCACTTGGAAGCCAAGTGTACCCATTACAGATGCAAATACTATTATGCCCACTGGCTGCATTCGTCTCTTCCCAATTGGATAGCTATACTTGTTGGGCTTTTTCATAGCATGTGCAGTAAACCAGAGTATGAAACCTGACAAAAGATCCAGTAGGGAGTCCAGTGTCGATGCTATTACTGCCATCGATAAACTTTCAACTGATGCAAGAACTTTCCCAATGAAAAGAATCAGATTGATGATATTCGACAGGTTGATGGCCAATCGTTCGCCCTTTGCCATTTGCCTCAACTCTTCCTCAGTAGGAGCATTCTGATCTAAGGAACCAATCTCATTCATGGTTTCCATCTCGCTGAAATCCTTCAGGAGATTTTCCTGCTTCTTGTAGTATTTTGCAATTTTCCGATGCTTTCCTGTTATGGGGCACCGACTTTTTCAGTACTCAGAAGTACTAATAAACGAAATAATCAAAGAAAGAAGAGAGTGTTAAACCAAATAGTTAATTAAGCTTAATGGAACTTATCATTTTTCAGTCCATAGCATGTTCCACATGCATTTAACAGCTTGATCAATCAAGTTAAAGTACTGTTCGATTGAAACATGGTATTCCACTAGGATAAATGCATATGCTAATTCACAGTTTCACACAAGGAAAAATATATATAGTCCAGATTGGAAAGAGTCCTAGCAGCATGGGAAGTGTCTTCCTTCAGTTCCTTGCTACTAATGGACCTAATGCAGTGGACGTAATTAGCAAACATAGTTGAGTAAGAACATTATTCATAGGTGAAGATAAAAGACTGAACAAGACTGTATGAGCCTTCCTTCCTTTTTTGGGCTGGTCCTCAAATAAAAATCTGTCTGGCCCATTATATTTTCGGGCTGGGCCTCAAAATCTATCACTCTTTTGGACCCCCCATTGGGCCATCTCTAATGCTATGTGCCAATATAAGGTTGATAAGTATGTCTATATGTAATTGCAATACAGTAAATTGCAGTCTGTGCCATCTTTTAATCGATCTATTTTAGATCACCCTTTAATCAATCTTTTTTACTTTGGACTAGATAATTTTAGCGTTGTTTTACGTTGGACCACTCCTAGTTTAATAAAAGATGTCCTAAAACACAATTTACTGAAATTTCCTTCAGGTGTCTAAATCGTCAGCACCTTGATTCTTCATATGAGCATCGATGCTTGAGAATTAGCAGCACCTCACGTATTAGTTGCCAAGACTCAAGAGACAAAATGGTTATTCTTCGTTGATATTCTTAATATGCAGAAGTATGGACAGTACTGAAATGACGGCCCCTTCGCATCAAAATAATGCTTGTGCTGTTAACGTCAGTCTACAACCAAAGACTAGACACTAGTGGAACGACAGAATTGAGTCCAGCTGAGTCTACCGAGCAACTAGTATACTGCAATACTATGAGTAAAGACAATCGTGTTGTTTAGTGCGGGTCAAGCCATCACAAGACACCGAGATTCTAATATAATCGATCACGAATTGAACAAAAAAGGGAAGAGGTAAAAAAGCTGCACGAGTAAAGTAAAGCTGGAAAAGAAGAAGCATGATCAGAGCAGTAGCTGCTTTTTCCATCTTTTGTTTCCTTTCTCCCTGAAGATTACTAAACTGGTAGTATTACTGTAGTACGAGTGAGTATATATGCAGAAAATCTAAGAGAATTGATCTCAAAGGGAAATCAATCAAGAGAAAAAAAACCATCTAGTATTAAACAGGAAAGGGGAGAGAGGATTGAGGATGGGAGGCGTGAGTAGGTGACCATGGGAGCCGGCGGGGAAGATCCTGGAGAAGAAGGGGGGCTTGCGGTGGAAGCGCTCCGGGACGGTGAAGTCGTCGCCCACCCGCAGCTTCCACGTCTCATCCTCCTCCGTCTCCGTCTCTCTCTCCCCGCCGCCGCGTCGTCCTCGGCTCCCCATGGCCTGCTTGCTGCTGGTGGCTAGGCCGGTGCAGAGGCAGCGATATGATCAGGAGCACGCAACTCGATCGTACTCATCCGATCGAAATGTCCAACTGGGCCGAGCTGGAGAGAATATATCCATGGCGCGCGCGGGCGTGAGGCCGACTGATACGTCTGGGGGCACGCGTGGTAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0001500.1 | 1 | 1676302 | G | A |
| Osa01LNT0001500.1 | 1 | 1673666 | A | T |
| Osa01LNT0001500.1 | 1 | 1673680 | G | C |
| Osa01LNT0001500.1 | 1 | 1674890 | G | A |
| Osa01LNT0001500.1 | 1 | 1676963 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0001500.1 | osa-miR5826 | Cleavage | 4.5 | 17.794 | 1 | 24 |
| Osa01LNT0001500.1 | osa-miR5826 | Translation | 5.0 | 14.3 | 1 | 24 |
| Osa01LNT0001500.1 | osa-miR5827 | Cleavage | 4.5 | 17.982 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR156f-3p | Translation | 4.5 | 9.159 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR156h-3p | Translation | 4.5 | 9.159 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR156l-3p | Translation | 4.5 | 9.159 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR167e-3p | Cleavage | 4.5 | 24.666 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR167i-3p | Cleavage | 4.5 | 24.666 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR395v | Cleavage | 5.0 | 21.918 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR2101-3p | Cleavage | 5.0 | 20.697 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118d | Cleavage | 5.0 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118d | Translation | 5.0 | 21.82 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118d | Translation | 5.0 | 19.898 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118f | Cleavage | 4.5 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118g | Cleavage | 4.5 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118h | Cleavage | 5.0 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118i | Cleavage | 5.0 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118j | Cleavage | 4.5 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118k | Cleavage | 5.0 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118l | Cleavage | 5.0 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118m | Cleavage | 4.5 | 14.056 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR2118p | Translation | 4.5 | 21.82 | 1 | 22 |
| Osa01LNT0001500.1 | osa-miR5490 | Cleavage | 4.0 | 18.654 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR5490 | Cleavage | 5.0 | 13.026 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR5490 | Translation | 5.0 | 12.654 | 1 | 21 |
| Osa01LNT0001500.1 | osa-miR5495 | Translation | 5.0 | 16.094 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0001500.1 | 1 | yd1a | Morphological trait | Seed | R753 | C161 |
| Osa01LNT0001500.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001500.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0001500.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0001500.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0001500.1 | 1 | n+p1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0001500.1 | 1 | n+s1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)