© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027100.1
CAATAAAAAAATACTATAGCATATGATGTCACCTGCACATGAACGCCCAAACCGAAAGGTGCATATACTCAAAATGCATCAGCTAAAACCACTAAATAACAGGGAATACATCAGATGCCACAGAGATCTACAAAGACGACATACCTACCCAAGTAGTGCGGTTTCATGTTTAATTCATATGCGAGGAATGAATAAGGCATGGATTTAATTCGGCCTTGCGTCAATATATTTGTCTCTCTTCTCAGCTCCCTGAATTCGACACCTTGGCGATAGCCTCCTGAGGGGGTGGGTGGTCGAACTTGCACTGCATACCAAACTTGCACACGCCAGTCTTCATGTAGAAGGCACATACCACGGCATCCTCTCTTCTTGGTAGGCCAGCAAGAGTAAGCTGCACAGACTCCTCAGCAGGCTCCCAGTTTGCAGAGGGATCGGGAGCAGAACGATCAATTGGGTGGTGAAACTTGCATCGGTCAGCAAACTTGCAAAATCCTGTCTTCATGTAGAAATCACAAACAGTTGCTCCAGGCCTCTGGGGATAGGTGACTGGCCCAGGTCCAACAGGCATGTGTGCCGCATGAAAATCAAAGCCTTGCATGAAGTTTGCAGATGAATTTAGCAGCATGGATTCCGGAGTAGGGAGAATGGTTTGACCCAGTGGAAGTGGAAAATTTAAAACTGCATTGAGCACCAAATTACCATAAGAATACATGTCGAGTCATAAGATTCAATTCATGTAAGAATCATGAACACTATCAGACTTGTTTAATTTAGATGCAATAACAGATATGGCAGAAGAGTGCGGCTATCAGATTGAAGGTGTTAAGTTCAAGGCATGGACAGTTTTGAACGTTGAATACAATACAAGCTTGTTTGGTTCATATGGCAAGTTCTCTGCTTGTTTTGGCTTTAAAGGTACAGTAGAAAGGACACGGTCTTAAAAATAATGTGTCCAAAAAGAAGAAAAGAAAAAGTTAGTAAAACCTGGTTAGTATTTGTCTAATGTCTTCAGTATTCCAGTCAACCGTGCTGCAACTCATAACAAGATCTGATCATTTATTCATTTCATAATATTTACATCAGATATAAGTAGCTTTACATTGCCCCATACTTGAATTAATGAATTTTAAGAACCTTGAAGGTACCTAGAGAATGAATTCATTCCTTCTCTTATTCTTTAATGCATTGTATTCCTTCTGCCTCGCAGTATAAGAAACCATGCAGCGGCATAAGAAAAGGTTAATGGCAACAGATACCAATTTCTATTGTACTGCCACATGGACTTGGGATGAATAAGCTGAGGTTTGGTGGATAATAACAGATTAGAAGGAAGACAGGAGTCTGGATGGATCAGATAAAACAGGGAGAAATAGAAGTAGAGGTAAATAAACTTGTTTATTCCTTGCTGCCAACTAAGGGTTGTAGAGATCCTTTTTCATAGCCACATAAACAGATAAGTTCAGCCAATGCATCAGCTCACAAACTATATCTCCAACAGATAAGCCTAACAACGTATCTGAGAACTAACAAACTAATTGTTGAGAAACAGATAAAAATACACAACCACCACCACTCAAGCTCTTTTACAGCAGAGAAGTAGGGGGTGCAACCGAGTGGAAACTATGCCACAAGTACACCCTTGATTTCTGCAAAATATTATGAAAAAAATGATCCTAAAGAAAATGCACTAATATTATGAAAAAGAGGAGTACAAGGCTATTACGTAAGTGCTCTATCCAACCAGGGCAAATTGCAAGTTAAATTATGCTATTAAATAGACGAGCAGCTAGATGATGGTTGCCACGCTCCTTCTGAGAAGTGGAAGAAGGCCAAAAGGATCTTAACTACCTCAAATTCATGTCATGATAAATTTAACTTTGTGAATATGGTTAGTTGTGACCATGAGTGACAAACCTAGACGATCAGGATGGTTGAATCGACAAGTAGAACCGAACTTGCAACTGCCCATCTTCATGTAAAAAGGACAATCAACTTCACCTGGTCTCATAGGCAGCCCTTTAGAGTTAAACTCTTGCGCAGCAGCAACTGGAGTTTGCATCTTCGCTGAAACTGAATCAGCTGCTGAACCAATATCCGTTTCTCCTTCAACAGTCACTGCACTTTCGGGTTCATTTTGACTTGAAGGTATTTCAATATCCTTGGGATGATTGAACTTACACATTGCACGAAATTTGCATTTGCCTGTTTTTGCATAAAAAGAACAAAGTGGCTCAGAAGGCCTCACTGGTAAGATAGAACTATCAGCAATTAGATGCTTATCATTGGTATTTCCAGACGCTAATGCATTAACCTTTTCCTTTGGATGATTGAACTTGCATTTCGATCCAAACTTGCATTTACCAGTCTTCATAAAAAAAGGACAATCTGGTTCCCCTTCTTGTTCTGGATAGGATTCTTCAACATTTGCAGCCTCTTTCCAATTTGGAATCCCACCCTCTGGAACCCATTGTGGATGGTCAAATTTGCAGGAACCTCCGAATTTACAGGTTCGGGTCATCATATAGAAGGCACAGTCCTTTTCCCCCGGTCGCTGTGGATATATAGGAAGGCTGCTTTCAAGCCTAGGGCGCTTGGTCATAGTATTTGAAGAATACAAAGCCTCAATCTGTTCAACAGTACTATGGCTTCCCATAATTGGCTGATGATAGAGAACTCCCATGGATCGCCTCGCGCCGGCCAGCCGCGCGTCGAGGTCGGCGGCGGCCGAGGAAGGGTTGGCGAGCGGGCGGCCGCCGTAGCGGGCCGCGATGAGGTCGACCTCGTAGGACGAGTACCCCGCCGCGGCCGCGCCCTCGCCGCCCGCGGCGCCGCCGTGGCCGTGCGGGTAGAAGGGGTCCGACATCGACGCTCCCCCCGAAGCCGCCGACGCGGCTAGGGTTTTCGCGGACGGTGGTTGCCGGCTTGCGCTCGCGGTGCGTGCGTGTGTGTGTGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027100.1 | 1 | 24472194 | C | G |
| Osa01LNT0027100.1 | 1 | 24472598 | A | T |
| Osa01LNT0027100.1 | 1 | 24473279 | C | A |
| Osa01LNT0027100.1 | 1 | 24473331 | T | G |
| Osa01LNT0027100.1 | 1 | 24475000 | A | T |
| Osa01LNT0027100.1 | 1 | 24475341 | A | G |
| Osa01LNT0027100.1 | 1 | 24475402 | T | A |
| Osa01LNT0027100.1 | 1 | 24475444 | A | G |
| Osa01LNT0027100.1 | 1 | 24475645 | T | C |
| Osa01LNT0027100.1 | 1 | 24476253 | T | C |
| Osa01LNT0027100.1 | 1 | 24477649 | A | T |
| Osa01LNT0027100.1 | 1 | 24478422 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027100.1 | osa-miR5516b | Cleavage | 5.0 | 21.897 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR7694-3p | Cleavage | 4.5 | 14.563 | 1 | 22 |
| Osa01LNT0027100.1 | osa-miR437 | Translation | 4.5 | 14.194 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR1428a-5p | Translation | 5.0 | 14.84 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR1431 | Cleavage | 5.0 | 12.765 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR1850.2 | Cleavage | 3.5 | 20.5 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR1320-3p | Cleavage | 5.0 | 13.834 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR2101-5p | Translation | 4.5 | 21.883 | 1 | 22 |
| Osa01LNT0027100.1 | osa-miR2101-5p | Cleavage | 4.5 | 14.563 | 1 | 22 |
| Osa01LNT0027100.1 | osa-miR2876-3p | Cleavage | 5.0 | 18.401 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR2876-3p | Translation | 5.0 | 18.46 | 1 | 21 |
| Osa01LNT0027100.1 | osa-miR5160 | Translation | 4.5 | 21.034 | 1 | 22 |
| Osa01LNT0027100.1 | osa-miR5516a | Cleavage | 5.0 | 21.897 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027100.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027100.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027100.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027100.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027100.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027100.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027100.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027100.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)