© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0303300.1
CCCAACAGGAATTTTGTCCATCATGCTGTAGAGGAGCAACCTTGTTCGTTCCAACCCAGAAAAGATTTCACTTCCTACATTCATCCAGGATATACTTTCGAACCATAGGTGGTGTTCCACCGAAGCTAGCAAGAGCACAGCGTCCTGTAAGCTTCGCGCTTGCCACGCAAGATTGCAAGTAGTTGAACTGTCTTCTTGGATCTCGAGGGCCACCACATATTAGTAGGAAGAAAGGCTTCAGATATTGTATTTGGTGGAAGGGGAAGAACGGGCGACCTGTTCTCAATTGGCAGGTTGTGAATGTAGTCCATCTTCCTAGCAGCCGCGCAGAAAGAACCTACAAACTCAGGCTTAAACTGTCACTGGGCAAGCTGAATCCCACCAATCCACCATAGGATTTGGCAGAGGCATTGGCTCTTCATGGCTGTCACCAAATGGCATTTGATTCCCTTGTGGCCCACTTCCATACCACTCTTTTTCTTGCTTCCATCCATGAATCTTGTATTCTTTCTTCCTCCAAAGGAACTGAACTCTGCATCCTCATAGTCAGATAGGTTTGCAGAGTAAACATTTCCACATCTAGTAATAGCCGTCTTTGCTTCATCTTCTGGAAAACCCATGCTGACTAAGGACTTGATTTTCTCATCGTTCTCTGACAGCTCCTGTAAGAAATCCTGCTTTTTCCATGCTCGTAAATGTTCTCCTTGTATACCCACTCAGTAACAGATAAAGCCCACCTCCAATTTCCTCTTGCCTCAAGCCCTTCCAGTATTTGTAGTAGATTACCTTCACTGGCACCACAGAGTTGACACCAGTATAAGCTGCAGGAAAGTAGTTGCACGAAGCAGAAGGACATGTAGACAGAAGCAATGAACAATCTACAGAGCCTGGCACCACAGAGTTGAGACCAGTATATGCTGGCTACAAACAAAGACTTGACTTATGCTAGTAACCGTTATCATTTGTCTCCATCTTTGTTGTCCAAAGTTTGAGAACTTGAAACTAAACCTTTATCTACAAATTTCAGGATATCTGAGGAAGTTATTCCATCTTTCGACAGCTCCACAACTGCTTCATTTATTAATCCTACCATTTTCAAATTATTGCCGTAGGTATCTTTTTGGAGAACCTCTTTTAAAAGCTCACATCCCTTCATGGGATATCCATTTGATATCAAAAAGTTTATAAAATATAAGAGGGAAAAAGTATCCAACTCAAAACCTTTTGTCACCATCTCTTCAAAGTAGGTTAGTGCAGTCTCTATTCGGCCACATTTGCGCAACCCGTTTATAAAAGCAGTATATGCTATATTGTTTGGAGCACAACCTTTCTCCCTCATTTCGCACCACAACTTAATGGCTTCATCAGGTCTTCCAGCACTGCAGAATCCATCTATCAAACTTGTATATGTAATTACTGTTGGTTGCTTTTCTTCATAAACCATTTTATCTAAGTAAGAAATTGCTTTCTCAATCCTGCCAGTCTTGCAACAAACATCAATCATAAGGTTGTAGGTAACAACAGAAGGAAACAGACCCTTCTCTAACATCTCTTCCATAATTTTTTGTGCTTCATCCAATTTACTTGATTTTCGAAACCCATTTATCAAGATATTATGTGCTACCACATCAGGAAGATAATACTTACAGGAAATGTCACGGAAGAGGTGTAACGCATCGTCCACCTCTCCAGTGTTACACATTCCATTCATGGCTGCAGAGTATGTGACAATGTCAGGAAGAAAACCAATTTGAAGCATTCCATCTAAAAATTGCACTGCTTCTGTTACTCTGCCACTGAAGCAAAGCTGTTGCACCATCTCCGTGCAGTTCTTTATCCATGGGGGATGCCCATTTGTCTGCATCTCCCTTAGTAAATCCAGAGCAGCCTTTGGATCTTTTCTCCTACAAATGCCATAGAACAATGAATTATATGTGAACTCTGAGGGTGTCAAACCAAGGTCCTTCATTTGGTTAAATATCCCATATCCTTCTTCTAACCGATCCATATTGCACAACTCATGGATCAAATCATTAAACATCAAAATCTTGCCCTTACAACCAAGGCTAATCATGTCTTTTGTGAGAGCTAAGGCCATATCCAGCTTCTTAACCTTACATAGGCCACAGACAACAATGTTAAAGGAATCAGAATTTGGTTTAGCATCTTCACGGATATGCAACATATGTGCACCACCAGCCACATCATTGTTAACCGCTTGACCACCACATACCATGGAGCGGAGCAACTGATAAGCTGCTTCTACCTCACCACAATGGACAAGCTCTTCTAAAACTACATTGTATAGTGGGACAACACTGCCGGATTTCAAATACTCTGCATTCTCATTAATGAACGGACCAATAACGGCAAAATCCCCTTCTCTACAAAAAGCCTCGATCACCTTCTTGAGTAAGCGGACGTCAGGAGCAACTCCACTGCTCTTCATTTCCTTGAACAACTTCACTGCTCTCGCAATGTCCTTCTGCTGACAGAGCCCCTCAATTAAAACGCTGTACATTGCCAAATCGACAACAAACCCGTAACTGACCATCTTGGCAAACATGTCCATGGCCTTGTCAACCCTGCCTTGCTTGGTGAACCCGTGGACAAGCACGCTCAATGTCTTCTCACTCAACCTCATCCCCAGTGCTTCCATGCTCCCTAGCAGCTCAACCGCACCGTCCACCTTCCCCCACTTGCTGAACGCCACCATCAGCGTCGTAAGCACATGCTCGTCCACCCACCCCAGCTCGCTCATCCTTTGGAACACGTCGTTGGCGTCATCAGGACGACCTGCATTGCAGTAGCACCGCAGGAGTGAGGTGAGCGTGTACTTATCAACGCTCCCGTCGCCGCACCTCGCCACCATCTCCCGGAGCCTTGCCTGGGCATCGTCCGCGCGGCCGGCCTTGGCGAGCGCGTCGAGGAGGCAGTTGTAGGTGTACGAGTTGGGGGTGCAACCGAAGGAGGCCCTCGCGGCGTCGAAGGCGCGGACGGCGGTGTCGGGCAGCCCCGCGGCGCCGAGGCAGCGGAGGAGGAACCCGAGCGCGCCTGGCGTCATGAGGCAGCGCGCGGAGATCGCGTCGGCGGCGAGGCGGTCGAGATGCGCGCGCTGGTGGCGGGGGAGGAGGGAGGCCATGGCGTTGAGCGAGTAGCAGGAGTGGCGGAAGCCCGGCTGGTCGGCGGCCCAGCGGAAGAAGTCGAGGGCGTGGCGCCAGGACGGGAGCCGGAGGAGGACGGACTCCGCGGCGGGGGCGGTGAGCTCGGCGGCGAGCCGGCGGAGGCGCGCCGCGTCGCGGGTGGCGCGCGGGCGGGAGAATTCGTCGAGCAGGTGGTGGGCGAGGTAGGAAGGGGATGCGGGCACGGGAGCGCGCGGAGGCGGAGAGGCGGAGGTGGAGAAGGAGAAGGAGCGCGGGGCGCAGAGAGAGCGCGACGAGGGGGAACGGGCTAGGCGGCGGAGCGACATGGAGGAGGGCGCGGAGGCGGCGCACGGCGGAGTGGAAGGCAGGGAGGTGGCCGGAATCCGGAAGGGTAGAGAGAATTCCAAGCAAGCCGGACCAACTGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0303300.1 | 5 | 14427974 | C | A |
| Osa05LNT0303300.1 | 5 | 14429465 | A | T |
| Osa05LNT0303300.1 | 5 | 14429834 | A | G |
| Osa05LNT0303300.1 | 5 | 14430044 | A | G |
| Osa05LNT0303300.1 | 5 | 14431354 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0303300.1 | osa-miR6254 | Cleavage | 3.0 | 13.108 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR394 | Cleavage | 5.0 | 19.01 | 1 | 20 |
| Osa05LNT0303300.1 | osa-miR394 | Translation | 5.0 | 23.946 | 1 | 20 |
| Osa05LNT0303300.1 | osa-miR396c-5p | Translation | 5.0 | 10.42 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR1854-5p | Cleavage | 4.5 | 14.775 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR1857-5p | Cleavage | 4.5 | 15.355 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR1857-5p | Cleavage | 4.0 | 16.921 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR1857-5p | Cleavage | 5.0 | 17.002 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR1874-3p | Translation | 4.5 | 20.347 | 1 | 24 |
| Osa05LNT0303300.1 | osa-miR2055 | Cleavage | 4.5 | 16.852 | 1 | 21 |
| Osa05LNT0303300.1 | osa-miR2103 | Cleavage | 4.0 | 13.981 | 1 | 22 |
| Osa05LNT0303300.1 | osa-miR2103 | Translation | 5.0 | 18.943 | 1 | 22 |
| Osa05LNT0303300.1 | osa-miR3979-3p | Cleavage | 4.0 | 17.236 | 1 | 20 |
| Osa05LNT0303300.1 | osa-miR5504 | Cleavage | 3.5 | 16.202 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0303300.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0303300.1 | 5 | qLTG-5 | Resistance or Tolerance | Cold tolerance | RM249 | RG13 |
| Osa05LNT0303300.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)