© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027200.1
TTAACTTGTTTGCAAAAGCACAAAACTGCCAAAGTACAAACTGCCTAACATCAATATCCTCTGTTCCAGCGCAGCATTTATCAAGCAAAAAGAACAAAAACATCCAGCATTTCTTTTCTTTCCAGATATACAGCATGAGAACTCTTCTTACCCACTTCTGCCCCCCTTGGCTTACAGAAAAGGGTAGGGACGAACACGCAAACCACAATCTCACACCTTCAATGAGATTCAGCCCGGTTCCTTCAAAAACCCACCGAACGAGCACCATCCTTCGCACAGTCCGCATCGAGCACAAGAACATTTTTTCTTCCTCGAGCGACCAAAGATTAACGAGGCCAGCCACGACAAAACTGATGCAATTCAATAGAAACAGCAAAAAGGGAATGTGTAAATCCTTAGGCCACCTACTGAAGAACTAGGCATGCACGCCATTTCCATTGGGATAATATGTTCCATTGGAAAGACCATTGGCAAGCTTCTTTGCGTGCCCATTTTGGTGTACTGTAGATGTGTAAGCACCATTGCTCAGAGAATGTTTAGTAGAAACCACGTGGCCATTGCAGCTGCCTTGCAGCAATCTATCCAGTTGCCCAGATGAGGCAGCAATTAGTCCGACAAAGAGTGGAGACGGTTTTGAAGGTCTTGACTTGAATTCAGGATGGAATTGTGCACCAACAAAATATCGGTGATTGGGGATTTCAATTATCTCCATTCTCCTTCCAGTCTCATCTTTCCCAACAAACTGAAGTCCAGCATTTTCAAACTCTGGCACCATATCTGGATTCACCTCATATCTGTGCCGATGCCTCTCATCTACATAACTGACATTGCCATACAATTTAGCAGACTTGCAATCAGCAACCTCGAAAAATGTCCTCCTTGATCCTAGGCGCATCGTGCCACCCATATGTGTTTTAGAACCCTCAGGCATAAAAATAACACATGGGGTCTTGGCATTGGGATCAAATTCTGTGCTGTTTGCTTCAGGGAGATTCATGACACTTCGAGCAAATTCAACCACAGCAAGTTGCATTCCAAGGCATATGCCAAGATATGGTACATTGTTTTCACGGGCATACTTGGCAGCCAAAATCTTCCCTTGAATACCTCTATCTCCAAAGCCACCAGGTACTAAAACACCATTGGCACCCTTCAGTAAATCCCATGCTGCTTTATAAGCATCAGGCGCCTCAATGGCAGTGGAGTCTTCGAGATCAGTAGAAGCAACCCAATCAACAAGAAGCTTCCTGCGGCAATCAACAGAAGCATGCAAGAGTGCCTTCAACACAGAGAGGTATGAATCAGATAGACCAGTATACTTCCCAACCATAGCAATCCTCACAGTATCCTGAAGTGCATCAAATAACGTAGCTCTTGCGACCCATTCATCCAACTTTGGCCCCCGAGCAAAGCTATCAAGGTTCAGCACTTTAAGAATGGCTTCATGTGCCTTTTGGTCCCGTAGCAACAAAGGAATACGCCAAATGTTGGAAACATCATACAGAGTGACAATGTTAGCTGCCGGTACATGGCAGAACTGAGAGAGTTTCTCCTTCACATTTTCTTCCAGTTCCTTAGTACTGCGACAGGCTAAAATATTTGGTGTGAGCCCAAGACCCCTTAATCCACGGACACTATGTTGAGTCGGCTTAGTTTTCTGTTCACCAACAACATTCAGAACTGGAACAAGACTAACATGCACCAAACAAAAGTTACCAGGACCAACACGATATGAGAATTGGCCCAAAGCTTCGATAAATGGCATAGATTCAATATCCCCTATAGTACCCCCAAGTTCTATCACACAAACATCAGCTGGTCCCTCCTTGCCATCTACAGGTACCATTGCGACACGCTCAATCCACTCTTGTATGGCATTTGTGATATGCGGGACAACCTGAACAGTCTTTCCCAAGTATTCCCCCTTCCTTTCCTTTTCAAGAACGGACTGGTAGATCTTTCCTGTGGTTATATTATTGTCCCTGGTTAGTTTAATGTCAAGAAACCTCTCGTAATTCCCAAGATCCAAGTCCACCTCGCCACCATCATCAAGCACAAAAACCTCACCATGTTCGAACGGGGACATGGTCCCAGCATCTGTGTTAAGGTAAGGATCTTCTTCCCCCTGAATCCCTCCGGAGTCGAGCGCCGCCGCGCAGCCCGAGGAGGAGGGAGGAGGAGGGTTTTGGGGGGAGGAGGAGGAGGGCGCGCCGCGCAGCCGCCTCTCGACAAGGGGAGAGAGGAAGGGAGGAGGAGGGGGGGCAATGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027200.1 | 1 | 24500123 | G | C |
| Osa01LNT0027200.1 | 1 | 24500648 | A | T |
| Osa01LNT0027200.1 | 1 | 24501227 | T | C |
| Osa01LNT0027200.1 | 1 | 24501720 | T | A |
| Osa01LNT0027200.1 | 1 | 24502638 | A | C |
| Osa01LNT0027200.1 | 1 | 24503073 | A | C |
| Osa01LNT0027200.1 | 1 | 24504058 | A | C |
| Osa01LNT0027200.1 | 1 | 24504165 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027200.1 | osa-miR5530 | Translation | 3.5 | 15.962 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR5808 | Translation | 4.5 | 13.748 | 1 | 24 |
| Osa01LNT0027200.1 | osa-miR5823 | Cleavage | 3.5 | 12.003 | 1 | 24 |
| Osa01LNT0027200.1 | osa-miR171i-3p | Cleavage | 4.5 | 12.721 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR416 | Translation | 3.0 | 22.11 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR528-5p | Cleavage | 4.5 | 21.771 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR5073 | Cleavage | 4.5 | 16.901 | 1 | 23 |
| Osa01LNT0027200.1 | osa-miR528-5p | Translation | 4.0 | 18.982 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR2097-5p | Cleavage | 3.5 | 16.073 | 1 | 22 |
| Osa01LNT0027200.1 | osa-miR5078 | Translation | 5.0 | 17.045 | 1 | 21 |
| Osa01LNT0027200.1 | osa-miR5492 | Cleavage | 4.0 | 19.269 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027200.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027200.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027200.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027200.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)