© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027300.1
GCAAATATGCAAATATATATATCACAAACACAATTCTACAACGCCAAACATGCAATGTTACAAGTTCCCAAAAAAATTACACTTTCACCTTTTTTCCTAACTAAGCTGAGTATGAACTTCTCAACCCAGGAGCATTGCTGCTGGGCAAAGATGGGCGCCACAATGAGCCTCGCCACAGTAATAATCGGTCGGCGTGCAACACCTTGCAAAACCGGTCTTCCCATCTTTTAAAACTTCCTGCCAGTTTGCGTGGTGCAAAACTCCATGTGATGCACCCCGATTTGCAAGATGGGAGAAATGAAAAGAGGCTTTGTGCTATCTAAGGCGCCAATTACTACTGTACATGGATTTACAGCTGGGTCTACTGCCTTGATGCAACAAAAAGGTCCTCCTTTAAGTTAGCGCAAAATCCTCTTCTTGGAAAGAAAGCTGCGGCTCTTCTTGGTAGGGATGAACCACTTTGTTTATCTCATCTGCGGTGAGTGTTTCACGCTCCAGCAGGGCGTTTGCTAAAGCGTGTAATTGCTTCTCATGCTTCTTCAATAAACGCTTGACCCGCCCATAAGCTTCTCTTAAGAGTTTGACGACCTCAGCATCTATCCTTGATTGCATCTCAACACTTGGCCGTTCTTTCACATGCACAGGACCAATAGCATCACTCATCCCACAATTTGATACCATGTACTGAGCAAGCTCTGTTGCAGTATGAAGATCATTTCTTGCCCCAGTTGTAACATTGTCTTCCCCAAAAATGAGCTCCTCTGCAACCCTGCCACCCATGCAAACATCAAGACGTGCCAGCAGCTGTTTCTTGCTAATAGAAGTCTCATCCTGTGAAGGAAGCTGTGTGACCATTCCAAGGGCAGAGCCACGAGGCAGGATAGTAGCCTTGTGAATGGGGTGGGCACCCTGGGTGTTGAGTGCAACAATAGCATGCCCACTTTCATGGTAGGCCGTAAGCTTTTTGGATTCGTCAGATATGAACATTGATTTCCTCTCAGTTCCCATGATAATACGATCTTTCGCAAATTCCAACTGTGCAGCAGCCAACTTGTCAGCACCTTCAACTGCAGCCTTAATTGCTGCAATGTTTACTAGGTTTGCAAGGTCAGCTCCATTGAAGCCAGGAGTACTGCGGGCAATCGCATTAACATCCACATCACTGGATACTGGCTTATCTTGCAAATAGAGCTCGAGAATTTCTTGGCGTCCCCGCACATCAGGATTGGGGACAACAATATGCCTATCGAATCTACCAGGTCTTGTAAGTGCTGGATCAAGAATATCTGGCAAGTTTGTCGCAGCCATCACAATTATTCCCTCATTTTGTTCAAAACCATCCATCTCGACAAGAAGTTGATGCAATGTTTTCTTTGTGTGTCCTTCCCACTGTTTTCTAGTTGAACCCACAGCATCTATTTCATCAATGAAAACAATGCATGGCGCCTTCTTCTTTGCAGCTTGAAACAATGACCTCACTCTCCGAGCACCAACACCAACAAACATTTCCTCAAATTCAGAACCTGCCCGATAAAAAAATGGCACACCAGCTTCACCAGCGATAGCCTTAGCAAGCAGAGTCTTCCCAGTTCCTGGAGAACCAGTCAAAAGTATTCCCTTCGGTAGTTTTCCACCAAGCCGAGTAAACTTTGAAGGGTTTTTTAGATACTCAACTACCTCCTCGAGTTCTTTCTTTGCGTCATCACACCCTTTGACATCTTTAAATGTCTTGACATTCTTCTCCGGCATGATATCCTTATTCAATTCTTTAGGAGAATATGATGAACTGGAACCAACACCAGATGCCCCTATTCCACCTAAGCTACCAATATACTTTTGAAGAGCAGCAGCACCCATTACCCACATTAGTCCAACAGCAATTGTAAACAGCACAGTCGAGAAGATTTCTTGAGCAAACCGGGTTGATCTACCTGTAGCTTTAGGGTCAACCATAACTACATGTAATGGTTGCTTTTCTGATATGCCGGGATTCATGAAAGGCTTGTCCTCGTTCCCAGATACACGTTGCTTCAATTCTTGCAGCAGGGCTGGCAGACTTGCAGACCTCCCAGACTGTTCGTCTGGAAGGTAATCAGCTATGCCATTGGTGAGAATAAGAGCCCGAAGGTATTCTGCAACACCTCTGCTGTCCACAGCATGGCTTCTTTGCTCGAACCTTTTGATGACATCTTCTGAACTTGTTGAGCTCGTGGAGCAGCGCGCTCTGCTTGGCGGGATCCGCGGGGTTGGCGTCCGCGTCGTCGATCAGCCGCTGCAGTCGCCGGTCGGGCCGCCAGAAGGGCCACCAGCTCATCCAGTCCCCGGACACCACCCAGTCGAAGAACCTCCTCGCCGCGGCCACCACGGCCGCCGCGAGCGCCAGCACCCAAGCCCTACCCTTCTCCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027300.1 | 1 | 24616499 | A | G |
| Osa01LNT0027300.1 | 1 | 24617783 | C | G |
| Osa01LNT0027300.1 | 1 | 24619033 | A | T |
| Osa01LNT0027300.1 | 1 | 24619430 | A | G |
| Osa01LNT0027300.1 | 1 | 24619569 | A | G |
| Osa01LNT0027300.1 | 1 | 24620082 | G | A |
| Osa01LNT0027300.1 | 1 | 24620999 | A | G |
| Osa01LNT0027300.1 | 1 | 24618625 | A | G |
| Osa01LNT0027300.1 | 1 | 24621647 | G | A |
| Osa01LNT0027300.1 | 1 | 24622274 | A | G |
| Osa01LNT0027300.1 | 1 | 24622297 | C | T |
| Osa01LNT0027300.1 | 1 | 24616509 | T | A |
| Osa01LNT0027300.1 | 1 | 24618039 | A | G |
| Osa01LNT0027300.1 | 1 | 24617194 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027300.1 | osa-miR6246 | Translation | 4.0 | 15.617 | 1 | 23 |
| Osa01LNT0027300.1 | osa-miR528-5p | Cleavage | 4.5 | 15.568 | 1 | 21 |
| Osa01LNT0027300.1 | osa-miR528-5p | Cleavage | 5.0 | 13.902 | 1 | 21 |
| Osa01LNT0027300.1 | osa-miR444b.2 | Cleavage | 5.0 | 11.413 | 1 | 21 |
| Osa01LNT0027300.1 | osa-miR444c.2 | Cleavage | 5.0 | 11.413 | 1 | 21 |
| Osa01LNT0027300.1 | osa-miR1861e | Translation | 4.0 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR1861g | Translation | 3.5 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR1861h | Translation | 5.0 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR1861j | Translation | 5.0 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR1861k | Translation | 4.0 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR1861m | Translation | 4.0 | 23.538 | 1 | 22 |
| Osa01LNT0027300.1 | osa-miR812o-3p | Translation | 4.5 | 10.325 | 1 | 24 |
| Osa01LNT0027300.1 | osa-miR5518 | Translation | 4.5 | 14.857 | 1 | 21 |
| Osa01LNT0027300.1 | osa-miR2096-3p | Cleavage | 4.5 | 11.024 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027300.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)