© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027400.1
GACAGTGCTCAGCAACTCATCATTAATCAGAGAAATTCTGGATTGTTAAACTAGTAGTTTCTACCACATCTCTCCACCAAACGATTCCACAGCATCAACTACTGTGCCATACCTCACAACAAAATGGCGGCAGAGAGGCAAAAGTACATGCATCGTATATGACATGTAACGTAAGACTGAATCAACAGAGCAGCTAATGGCTGTTATAAGGGCGAAACGGGTGCTGCTGGCCTCCTCCCTGCCCAGCAAAGGGCATCATCATCTGGGGCCCCGTACCAGGAGGAAACTGCTGGTCGCCGTACATCGGAAACTGCTGCGGCGGCATAGGTGGCCTTGGACCTTGCTGAAACTGCGGCTGGCCTCCATAGCCTGGAGGTAGATGCTGCCCTCCTCCATGGCCATGGAACGGCATTGCTTGTTGCCCAGGTGCGTCTTGAACTGGACGGCCTCCGTCGCCAGGGTACTGCATGAACGATCCTGGAGGTGGTTGATGGTTCATTTGGCCAGGCATCTGCTGGCTTCCCTGGACTGGATGTTGTTGATGCATTTGAGCTTGAGCTGAGCCTGGGGGAAACTGTGGAGATCCATAGCCTGGAAATTGTGCAGGAGGAACACCAGGGGGGCCTTGAAGAATTCCCTGGCTAGTGTACAGCGGAGCTCCACCAGAGGGAACGGCAGGAGTTTGCGGAAGCGGCTCGCTGGATGTGTAAGGATGAGATGGTGCTCCAGGTGGAGTGAGAGTAGTCCCTGGTGGCACTACTGCACCAGTCGCTGACGAAGGAGCGTTGTTGTAAGCACCGGAATATACTGGTTGAGGACCAAGAATGGAAGGTTGATTGCTGGTCGGTGCAGTGTTCCCTCCAGTGTAATCTCTACCACGCTCATTGTTAACCTTAACATTAAGATCGGTATGGCGCGAAAATGTGAGATGAAGCTTGCAATATCCACCTTCATAGATGCTGTGCCCTTCTAATGCTTCTTTTGCTGCAACTGCGGTTTGAATATCTGGATACTGGATTAATGCCTGGAAGCCAGAGTTCTTCTCAAAGATAGCAATCTTTTGCACAAAACCAAAAGCAGAAAAGACCTCGTGAAGCACATCTATTGTAACAACATACTGCATGTTCTCAACAGATGCAAGCAGAACGTTGCTCTCTGCTTCCTGCTTCTTCCCATCCGGTCCAGATCCATCTATAGCAGAAGGAGCAACCGGAAGGTACGGATTAGTGTAGTCTCTACTCCTGTGACTTTGAAACTTGACATTTAGAACAGTATGTGCTGAATAATTTATTCTCAAAGTGCAAGGCACATCAAGTTCTGGAAGCAAATAGCTAGGAATGCATCTACCATCCAGAGCAGCTTTGGCAGATGATGCAGTTTCAGTATCACAGAACTGTATCAATGCCTGATAACCAGATGCCTTCTCAAAGGTGGCAATCTTTTGAACAAAGCCAAAAGCAGAAAATACCTGCACACACGAATTCTGTTGTGAATATGACAAGCAAATTGATAAGAAAAAATGGATCGTGAACAAATGAAGGTTAACTACATCTGAGTGCAGAAATCATTGAATCAAATAGAGGCCTTCTAAAATTACTAGACAGTGGAAATGAACTTATCATGTCTCCAGGCATAAATACAAATTGTAGCAATATAAGCTTTTACTATGTCAGTAAAAAAGAAGAAGTTTATCATGTTACAGGCTACAGAGTCAACACTAAGCATTTTCTAGTATTTGCTAGATGACCTATGAAAGGAAGGAGTCACATCTTTAGGTATATCTATGCAGCAGTAATAGAGTAAAAATGTTGACATTCTATATAAACAGATCATCCATATGTTTGACCCCAGAAGCTCATTATAACAGAATATAATATAGGTTTGGCAATCCTCAACACTACAGAGCATAAAGATAGCAAAGAAGCATACAAACAAGCCAACATTTACACCCAACGTGGCAAAGGAAGTTTATGGGTGTGGAACTAAAGCAACATAAGAAAACAAACAGTTAATGGACTCCAGTGATGTTTATTTCGTCCTTATTGAACAACAGTTCCGTAAAAAGTATGATCACAATATGAGAGATTAACTGTTTGACTTATTTTATCACCTTTTTTTTTCTATAATCGGACTTCAGTTATGCTTATTTTACTGTTATTGATCTGTCCCATAAAAAGTAGGAAAAGTTGGTTTTATAGCACCAAAATGCAACCTGTTTAGTCTTATACCACAAAAAAATTACAGTTCGTTTAGTTACCACCCACCCAACCGACCTTCCATTCCCCAATTTACCACTGCCAACATGTTTTAATAGCACTGTAACATCATCGGAGACAAGCCAGAAGCGCAGAACAAAGGCATTGAGGTGCTGCTGGTTGAGTAGGACATGAATGGAAAGGAAGAGAAGAAGGAAGAAAGGGCTAGTTTTTAGGTATTCACAACTCTATTTCTCAACCACAAAAAACATAAAATTGCTAAAAGGAAACAGAATAACTTGGTGGTGCTAAATCGGGTAAATAAAAGACTACTGGGAAGGTATCAAAGTGAACTTGAAAATTTTGGTGGTATAAAATAAAACAGGTCATATTTTGAGTTTTCTTATGAAAAGTATGATACCAGTATGAGTTTGACGTCTTTATTGTCATATGGCTATTGCCATATTTAAATCCAGTCTTTTGAGGCTTCCGCCTACGCAATAGGTGGCACCCTCTACCCTCTGCCCAGCTTGTAAATTTATCCCCACCAAGGGAAGCCTATTCAGTGATTAGGTATTGACGCACTGATGTGCTGCCCATCTAGCACCTTGTGCCTTTGGTAACTCAACAAAATAAAAGGAGAACACATGAAGTTAATTGTTGGCAGTCATTCAACAGGAAAACACAAGCCCATATCTTTGTGTTTGTTCCAGATGGCTTTCCTTCTTTGTGTTTGTTCCAGATGGCTTTCCTGAGATGCTCATACTAAATAAACAGGACATATTTTTCCTTATTTCAGTAAGCATGGTGTCCTAACTACCTTGGATGCATCATGTCAATATATTGTATCTCAAATGGTTAACGCAGACATAACTCCAGTAATCCAGCAATGAAATTTTAGTCTGATAATTGCAGCACTTAGGGCTCAAGTACTCTCCTTTGAGCACAAGAGAAAAACCACTTTTTATGCCACTAGTTATTACTTAACCAACCATGATGCCATGGATAACGGACACGAGTGAGGGAGGGATAGTTGGGGTGAAGGGAGAGAGGGAGGGAGGGAGGGAAGAAAGGGAATGGATAGGGCAGGCAATGAGTAAGGGAGAGGAAACAAACACACACATGTGTTCCGGATGCAGTAGCCTGCCAGGATGCCATGAAACTCCGTGACAATGGCCAGGTGTAGAACATCGATGCTCACAGCATCTGGCAGAACACCTTCCATCGACACTAGCAAAACATTGCCTGCAGCTTCCCCTGAACTCTTGCTGTTGACAATCTCTTGTCTATTGGAGTACTGAAGGTACACATTTTTCCCTCTTACCTGTGCAGGCTCAGCTGATGATGCAAAATATGATATCATAGCAATTGCCTGATTTTGGTCAGCGAATTCGACGAAGGCCTGGTTCCGGTTGGCGCCGACGTTGCATTTCGTGTTGACGACCTTGCCGAAGGGGCTCCCGAGCTCGACCAGCTCCTCCTCCGTGCAGTCCCACGGCAGGTTCCTCAGGTGGATCACCTTCGACGGCGGCTGCGTGTACCTGAACTGCGGCTGCCCGGAAGCCATCCCCGCACCCACCCAAGATACGCCTCCTCGCTTCCTCGCCCGTCAATCTTTGCGAGAGCTGCGAGTCTGCGACCGCCGGCGGTGGCGGCGATGGGAAGAGGCGAGATGCCGGAGCGGAGGAAGACGGCTTCGATTTCTCTCTCCTCTGTCCGTATCGGTGCGGGTCAAATCTGAGGCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027400.1 | 1 | 24635276 | C | A |
| Osa01LNT0027400.1 | 1 | 24636624 | T | C |
| Osa01LNT0027400.1 | 1 | 24636759 | T | C |
| Osa01LNT0027400.1 | 1 | 24637181 | T | C |
| Osa01LNT0027400.1 | 1 | 24637687 | A | T |
| Osa01LNT0027400.1 | 1 | 24637983 | T | A |
| Osa01LNT0027400.1 | 1 | 24638223 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027400.1 | osa-miR166a-5p | Cleavage | 5.0 | 21.082 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR166a-5p | Cleavage | 5.0 | 13.295 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR166e-5p | Cleavage | 5.0 | 21.082 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR166e-5p | Cleavage | 5.0 | 13.295 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR171f-5p | Cleavage | 4.0 | 15.383 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR1429-5p | Cleavage | 5.0 | 22.336 | 1 | 21 |
| Osa01LNT0027400.1 | osa-miR1871 | Cleavage | 3.5 | 19.084 | 1 | 24 |
| Osa01LNT0027400.1 | osa-miR1879 | Translation | 5.0 | 9.004 | 1 | 24 |
| Osa01LNT0027400.1 | osa-miR2868 | Cleavage | 3.0 | 12.048 | 1 | 20 |
| Osa01LNT0027400.1 | osa-miR2868 | Translation | 4.5 | 14.471 | 1 | 20 |
| Osa01LNT0027400.1 | osa-miR2873a | Translation | 4.0 | 23.801 | 1 | 24 |
| Osa01LNT0027400.1 | osa-miR3979-5p | Cleavage | 4.5 | 7.102 | 1 | 20 |
| Osa01LNT0027400.1 | osa-miR2863c | Translation | 5.0 | 11.024 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027400.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027400.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027400.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027400.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027400.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027400.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027400.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027400.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)