>Osa05LNT0307600.1

AAAAGTTCAAAGTACTTTTATTGGCAACAGAGTGAACAGACTGCATATAATGCATCTGATTGCATGGATTCGTTCAGGAAGAAAATATATCAACGTTTTGAAAGCGATGTCGTAACAAGTTAACAACCCGTTTATACTCGGTACGGCTGATCCACCAAGTCATGTGTTGGTGGCATTAGTTCTATTTGGCGAAAGAACCACTACCAAGATTTCTCTCAAGGGTCGAGCTCTTCTGCCAATTCTCGACTGCTCGCCTTACTACAGCTTGGGCATTGCGGATCTCTGCATCAGTGAATTTGTGCTCCACAATCCCTATCGGTCCTGGCTGTAGAACGTTTATCACTGTCTCAACATCTTGCTCCATCTGCCTAAAAAGTTGCGGCAACCTTTGAGGTAACAGCCTGAGGAAAGACATCACGCTAATCTTCTTAATTCAGATTGATTCCTTTGTTTAGATGTTTTGTAGCCGCCGGCCTGCTGCTGGCCTATTGCTCTGCCTGGTCAGGAGCAGATCCTGGTCACGCGCGCTCCCGTGGCGTCGCCGGCGGCCGGCCGCCTGTCTGCAACCTGCTCGGCTGCTCTTGCTCGCGGACGCGCCGTCACCCGTGCTCCGCTGCTTGCCTGCTCACCGCTGGCGCCGCCGGCCCCCCGCGCTGCTCGCCTCTTGCGCCGCCGGCGTCG

Explanation	CPC Score
noncoding	-1.15868

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0307600.1	5	17881236	C	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0307600.1	osa-miR5525	Cleavage	4.0	16.09	1	22
Osa05LNT0307600.1	osa-miR160a-3p	Translation	5.0	24.844	1	21
Osa05LNT0307600.1	osa-miR160b-3p	Translation	5.0	24.844	1	21
Osa05LNT0307600.1	osa-miR1423-3p	Cleavage	5.0	21.447	1	21
Osa05LNT0307600.1	osa-miR444b.1	Translation	4.5	20.273	1	21
Osa05LNT0307600.1	osa-miR444c.1	Translation	4.5	20.273	1	21
Osa05LNT0307600.1	osa-miR5485	Cleavage	5.0	14.012	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0307600.1	5	QKw5	Morphological trait	Seed	RG182	RG13
Osa05LNT0307600.1	5	qLTG-5	Resistance or Tolerance	Cold tolerance	RM249	RG13

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus