© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027600.1
CACACACACATAGGTACGTAGCTAATACAGCCCGATATATGGCGTTATATGTAACTATATCTGTACGCCCGAAGAAAGAAGTAACAAATTAAGCTATATACCTCTCAAGATACAATGTAATTAAGGACCTAGCTAGAAGATATATATATATATATGCTGCCTATATATATATACCTCCTATATACGGACATATATAATTCAATTTAGTCCACGACGTTGTTGCTGAAGAGCTTAAACTGTCCAGCGTCGAGCACGAGCTTCCGTATGGAGGCGAATGCGCCGATGGCCCCGACGCCGGAGAAGACGACCATGATGGCCGTGTTGGCGAGGAACATCGGCGACCGCCTGGGCGGCGCGAGCGCGATGTTGTACATGACGACGGGGAGGACGAAGTCGAGCGGGATGAACCCCACGGCGCCGACCACGCCGACGATGTCGCCGAAGAAGGGCAGCATGGCCGCCATGAACGCGCAGAAGGCGAGGTAGAGCGTCCGCAGGAGCAGCCGGGGCACCACGTTCCGCCGCGAGAACTTCCCCCGCGTCGCGTCCGCGGAGCTCTTCTCCATGATCTCGTACGCCACCTGGGAGTAGACGAGGCCGATGGCGAGGAGCTGGAGGAGGACGAAGAGGACGGCGAGGCCGAGCAGCCACGTCGGGGCGAGGGCCGGGCCGGTGTCCGGCATGAGGCTCTTGAGGACGTTGGACTGGACGTGGCTGCCGAACGCCCAGTAGCCGGTGATCGAAGGGATGTAGAAGGCGAAGGCTATGACGGAGTAGCACAGCACAAGCGCCTTCATCATCTTCCCGGCCGCCGGTGGCGCCAACGTGGCCTGGATTTCAGGCAGTATGCCGTTGCCGTAAACAGAAGCCAGGATAGAAATAGAGAGGAAGGCATTGAAGGTCTGTTCTGATTTGGACGAGCTAAGCGTGTAATCCTTCCCCGGAGCATCTTTTGACAGACCTGCACCAATGCAAGCAGCAGATACAAGGATGGTGTAGCCCAAGCTCAAGAGCAGAGAGGCAAAGTTAATGTGCCGCAGGGAATGGAATGATGGTAGCTGGGAGAGGAAGGCCAGCGCCACAGCTACTATGATGATGAAGTGGTACAGTTTCAGGGGACCATTGGGAGAAAGGCTCGTATACATGATCTCGAGGCAATCGGCGGCGAGCAGGATGGTGCCGATGCTAACGCCGGTGTTGATGGCCGTCTGCACGATGACCACGAAGTAAAACATCCACCCGGACCCGAGGACGTCGGCGGCGAGCTCGCGGAAGCGGATGTGGCGGCGGCCGCGGGCCTCGCAGTGCTCGAGGACGCGGGACATGAGGGAGTACTCGTAGAAGGTGACGGCGCCGACGGCGGTGAGCACGGTGAGTCCCAGCGCCCACCCCATCCCGCGCAGCGCGTACGGCAGCGTCAGCACCGTCGGCCCCACGATCGCCGTCGTCAGGTGGAACCCGGCGTGCCACCACGTCCCTTTGGACTCGAGCACGAAGGCGGCGCCGGCGTCGGCGGCGGGCGGCTTGGCGGCCGCGCCGGCCTCGGCGTCGAACGCCGCGTGCGCCATCGCCTTCGTCTCCAGTCGTCCCGTGCCGCGCCACGCCACGCCACGGTATTTATACGCGGCAAAGGCGACGCGAAGAGGAGAGGATTCGCTCGGCCACTCTCTCTCTCTCTCTGTGGATGCGTGTAAATCCCAAGCCCCTAATCTGATGAACCAACTTAATCGGTGCGTTAATTGAGCGGTAACGAGGAGATTAAATGTTGTAATCTCGCGATTACTGCTCCAACTGCGAGTGCCAGAGGCTTTGCGGGGATCCGCTTTGATCAGTTGATCGTCTACTAGTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027600.1 | 1 | 24755509 | C | T |
| Osa01LNT0027600.1 | 1 | 24755647 | A | T |
| Osa01LNT0027600.1 | 1 | 24756195 | A | G |
| Osa01LNT0027600.1 | 1 | 24756265 | A | C |
| Osa01LNT0027600.1 | 1 | 24756546 | C | A |
| Osa01LNT0027600.1 | 1 | 24756818 | A | G |
| Osa01LNT0027600.1 | 1 | 24756957 | T | C |
| Osa01LNT0027600.1 | 1 | 24758516 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0027600.1 | DTM_#DNAt_MULE_japo_Os0218 | Chr1 | - | 24754647 | 24755061 | 414 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027600.1 | osa-miR5790 | Cleavage | 5.0 | 22.389 | 1 | 24 |
| Osa01LNT0027600.1 | osa-miR7693-5p | Cleavage | 5.0 | 19.87 | 1 | 24 |
| Osa01LNT0027600.1 | osa-miR168b | Cleavage | 5.0 | 22.828 | 1 | 21 |
| Osa01LNT0027600.1 | osa-miR2092-3p | Cleavage | 4.5 | 22.541 | 1 | 22 |
| Osa01LNT0027600.1 | osa-miR812o-5p | Cleavage | 4.0 | 23.176 | 1 | 21 |
| Osa01LNT0027600.1 | osa-miR5494 | Cleavage | 5.0 | 15.744 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027600.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027600.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Osa01LNT0027600.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027600.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)