© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027700.1
CCCGCAAGAGGTGATTCACCAGTATATATTTACAAATATATATTAGAAAAATGTATAGCTCTACCAATATATTACAAGCCGACAATTGCACATATACCTAATGCTTCCCATGGTGAGGCAACATACCAACATGGTGATAGCACAGATAAGAAACATATACAGGCAGAGCAGAGAAGTTAGAGCTGCCTGGTAGATCGAATCGTTTCAGTAAAAGGCATGGAGGTTTGGAATTAGTAGGAGGAAGATTATTAATAGTAAAATCATGGGAACATGTGATCTACCAGCTTCTTGGACACCACAACTTGCTGCGTAGTCCAGGCTTGAGGTACACTTAAAAAGCTTCAATCTCACTATTAGTAGATATCACAAACTTGCCTCCAATTTGCAGCTACGAGGGGTAGGAGTAATAATAGACCCACTATCCAGCTATCTAAACTCTTCAGGGACATGCATGCCAAAACCACGCTTCAGCTTCTCAATCGTGGGAGCAAGTTTGCCAAGACTGCGTAGCTTCTTGCCAGTTTCTTCATCAGTAATATTTCCAGAAATCTCTACAGAATATGATTTGCCAGAGATGCGTGGAAGCCCTCTTCCTACAAGCAAATCTAGATCTCTCTGATGAAGTTCTCTGCCATTCACGAAAACACCACTATCCCCACTAGCACAGTTACTGGCCATCGGGTAATTGAATTCTCTTATGAATGGAGGGATAATGCCGATACATTCTCGCCCCATGACACCCCAAAACCCAGCACGGTAGTCGTACCAATACGAGCCAGGCTCAACAGGACCAGCTTTTTTCTCTGCCTTCTTAAGAGCTCTTTCAGAGATAGGATGGCCATTAATTGAAACCTTAACGCTGTCCATGGACTGATTAAATAAAGAAAGGTCCTTGAAACCCTTCTTCAGGAAACCAGCAAAAAATGACGAATCCCCACTCTTTCCAGTTGAGGGCTGATCTTCTTCTAATGCAGTCTCAGAAGAACCACGGGAAAAACCAGAATTTGTACGCTCATTAAATGATGATCCCCCACTCTCTGCAAAGGCATTGCCATCTTCAACAAAAGGCTGGTCCAAACTTCCATTTTCTTCCTCTGTTTTCTTTTCTTCAGATATCTCGCTTAAGCTTGCCGCATCAGAGGCATTTCTAGTATCTTCAAGGGGGGCATTGGCATCTTCAAGGGCACTATTTTCACTTTCTTTGTTGTTTTTGTCAAACCCCTTCTTAACATTCTCACCTTCAAGGCCACTATTTTCGTCTTCTTTGCTCTTTTGCTCATGTTCCTTGTTCAAACTTTCACCTTCAAGACTATTGGTATCATCTTTTTTGCTTTCAAACTCATGCTTTTCATTTCCATCTACAGCACTGCTAATATTATCTTTTGTACTATCAAATTCATGAGTTTTGCTAACATCTTCAGGGCTAGAGTGATCGTCCTTGCTCTTCTGTTCATGGGTTTTGCACATGCTTTCATCTACAAGGGAATCTTCATCGCATTCCTTTCTCTTCTGTTCACTTCCCATACTAAGACTCCCATCATCATCATCATTAACTTTGTGTTCTCCTTTGCAATTTACATCAGATATATTAGCCATGCCTAGGTCCTCACTATTATTATCCTTTTCCTGGCTGCACAATGGATCAACAAGTTTGTCCTCTAAAACTGGGGAACATGGGCTGACTCGAGCATCTGAAGGTTCTACCTGACATTCAGCATCTCTTTCGCATAATATATCCTTCGGGCTCTCAATATCTCCAGATCTGCTTGGAGACAACAAGAGCCCATCTGTTTTTAACTGAATGCTCCTGCTTGATCCACATCCTTTCTCAGTCCTGTCATGACTAATGGAAGAAGAAACTGAATGATCATCACCAAAGTCTATGTTGATTTGCATGCTGCTATGCTCATTCAAATTATAAAAGGCAGAATTGGCAAACTCATTGAGCTGGTGCTCAAAATCTCGCCTAGTTTGATCATTTGAACCTTGCTCAATTTTGGGCACACAAAAGGATGCTGATGGTGAGAAGGGGATAACTTTCTCCTCACGCTTCAAACTGACAATCTGAGAGCAAGACCCACACTGCAGCCGATTCCTCCCCATACACTTTTCCATTGGAACCTGCAACAGCTGATAACAAGAACTGCACACAACAAAAGGGGCGGCGCCATAAACAGGACGGCAAAGATGCTCTGCCTTCTTCCGGAAATACTCTGCTCTCTTCTTTGAAACCGACCGATGCGAGTACAATGATGATGCTACGGACCTCCGGTCATAGTCCGATGAGACAGATGGCGACCTTTCAAACCGGTAGCACTCATGCTGCCCAGCAAAGTATCTCGCCATTGGAATGTGCTCTTCTTGTGGTGCAGTTCTCTGTCCATGTAGACAATGCGGACAGGAACATGTATAAGAAGGATTGTAATTCCCATGTCCAACTCCACAGCCATCCCATTGCCTCCCTTGATACTGCCGATACCGCCCACTTGACTGTCTGGAGTACCTCTCCCCAATCTCAGGGCGCAGCGGCTCGTAGGGGCTCGGCGGCAAGCCGTGCCCATACCGCCCACCACCATAGCGTGAGCGGTGATACCCTGGCATTGGTGGCGGCTCAGGGTTCTCAGGGAGCAGCGAGAGCGCTCGTCGGCCCGCCCGACGGTGCTCCCGCGGCGGCTCGACGATCTGGCAGGTCCTCGTGATCTGCTCCCTCAGCTCGTCCAGCTTGCGGAGCAACTCCACTGGGTCCTGCTTCAGCGCGTGCCAGTCGAGCGCCCTCTGCTCGCTGCATTGCGCCCGCTCGTCGAGCCCAATCCTCCGCCTGTACTTCATCTCCTTCAGATCGCTCCCCATGGCGCGCGCCTCCCGGAGAAGACACGCTTCCTACTCCCCCACCACTTGGCGGATCGAGAGGTGACGCTTCCGACCAGCTCGCTGCGGCGAGGCTACGGCACAGGGGCGTGGCGGCGCCGCCGGCTCGCCATTTAGGGTTTCGTGGGGCGGCTCGAGGATTCCGCCATGGGAGAGAGGAGGAGGAGGAGGGGAACGGCACTCGCAGTGGCAGTGTGCGCGTGGTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027700.1 | 1 | 24764216 | T | C |
| Osa01LNT0027700.1 | 1 | 24764364 | C | G |
| Osa01LNT0027700.1 | 1 | 24765134 | A | G |
| Osa01LNT0027700.1 | 1 | 24765733 | G | A |
| Osa01LNT0027700.1 | 1 | 24767327 | T | C |
| Osa01LNT0027700.1 | 1 | 24767399 | C | T |
| Osa01LNT0027700.1 | 1 | 24768104 | G | C |
| Osa01LNT0027700.1 | 1 | 24764693 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027700.1 | osa-miR5544 | Cleavage | 4.5 | 5.884 | 1 | 22 |
| Osa01LNT0027700.1 | osa-miR1319b | Cleavage | 5.0 | 23.317 | 1 | 24 |
| Osa01LNT0027700.1 | osa-miR5834 | Cleavage | 4.0 | 9.663 | 1 | 21 |
| Osa01LNT0027700.1 | osa-miR408-5p | Cleavage | 4.0 | 15.769 | 1 | 21 |
| Osa01LNT0027700.1 | osa-miR1432-5p | Cleavage | 4.5 | 8.858 | 1 | 21 |
| Osa01LNT0027700.1 | osa-miR5083 | Cleavage | 5.0 | 17.46 | 1 | 20 |
| Osa01LNT0027700.1 | osa-miR5497 | Translation | 5.0 | 18.417 | 1 | 21 |
| Osa01LNT0027700.1 | osa-miR5501 | Translation | 5.0 | 17.552 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027700.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027700.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0027700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027700.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | BCD134 | RZ776 |
| Osa01LNT0027700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0027700.1 | 1 | nan | Morphological trait | Panicle/flower | CDO920 | RZ776 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)