© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0308400.1
AAGCTGGCTTGAAGGCCCTATCCACCTTTCCTGCTCACCACAAAATGCCACATGAATGGTTCCATCCCAGACATCATCTTCATATCCAATCCCATGTACCACGCCAATGCTACCTGGTTTGAGCGACTTCCAATCATCTGCATTATTTCTCAGCCTAACCCATTCACCCACCTCATAAACTTGCTCAATCTCAAGATCTGCAGGATCACCTTTCCACAGCCCAGGCACACCAAAGAAGGCTACTCTTACTTCTCCATCAGCATGGACACCAGCAATTATGCCTCTGGAATCAGGCTTTGCATCTCTCCATCCCCATCTGGGCTCTGTAATTCCAGCACGGAACCGAACATGATGACCAATCTTGAGAGGCTCTACTTTATCAATTTCTGTGTTATGAGTTAACCATTTCCCTTTCCTGAAACAACCAGCCAACTCCAGGTAACCAGAGTCTTGAATGCTATGAACTACTGCAATACTTATTTTCCCAACACTCCAGTCATAAGTAGGCCTGCTCCCAATACTAGATTTCAACCGCACCCAGTCTCCAACCTCAAAAGCCGAAAGCCTCTCAGCATCACCTGGAGCTACCTTCCACAAGCTATTTCTGCCAGACACCTTGACATTTAGAGTCCCATCCATGTCTATCCTTGAGATAGCCCCGATGGTTGCTGCAGTTTCATTTGACCATCCAAGGCGAGGCTGAGATATTGAAGGTAACACATGAATTTTTTCTCCTACCTCAAAAGGCTGTGCCTTCTCCACATCTGCAACTGAGCAAGAAAAAGGCTTGCTTCTGAAGCAGAAAGCAACACCCATATCTCCATCTTCTTCTAGACTATGAACCACCCCAATACTGCTACGAGTCACATCCTCCCAGCCATATTTAGGGGATGGTACTGCTGCCTTCACTCTAACCCAATCACCGACCTTAAACTTTTCTATCTTTTCCATGTCTGATGGATCTGCCTGCCAATGTACAGCCCGGTTAGGAATATCAATTATGAGTAGCCCATCACTCTCGATGTCAATTATTTTTCCCACGCTGTGATGGGTTTCACCACCCCAGGCATATCTAGGCTCTGCAACAGACCTTTTTACGCATACTTGGTCACCAATCTTGAAGGGATCAACATGTTCAACCTCCTCTGGTTCACAAAGCCATGGACTTGACAAATAGCAAAGTCCCAATAGAAGACTGCTGTCTGGCCTGATTGAGTAGACAATACCAACACTTCCAGGAGTAATAGATTCCATGCCATGTACAGCAACCGTTAATGAGGGACGAATCCGAACCCAGTTACCAACCTTATATTCTTCAACCCTTACAATTTCAGCAGGATCAGCTCTCCATCCCCTAGAAGCTCCTGGAAAACCAACCCTCAAGATTCCATCATCATCAACACAGAGAACTGTCCCAATGCTATCTCGTGACTGACCACGCCATCCAAATCTAGGCTCCAAAACATCAGGTTTGAGCTGCACATGTTGGCCCCTATTTAATGGAATGACTTTGATAACTTCACTCGTCAAAACGCGGGCTTCTCCAGAACAAAATGACACAACAAGGTGGTCATGGTCTACAACAGACTGAACAAAACCAATGCTTCTGGGTCCTGCACCTTGCCAGCCAAAAGCTGGTTCAGTAACTGTTCTTCTAAATTTCACCCAATCTGCGAACTCATATATGGTTGGGGTGAGATGAACTCCTTTTTCTTCTAAAGTTTCCATCAGTTCTTCAGAAATCCATTCTCGTGGGAGCCTCTCCAGAAAATCTCGCAATGTCCAGCCTCTGTGGTTTCTCACATCAACAGCCGGCGATGGCTGTTGTAACATTTGAACAATCCATGAGAGGTTTTCACGTATCATTTTAGCCGCATCAGCAGCTATGTGGAAAGCGTTATCGCCGTCGTCATCCTGTAGATTGCAGTTTGCTCCAGCAGCTAAAAGCAAACCAACACAGGAGTTTGCACCTCTGTTCAGTGCAACGAGAAGTGGTGTTGTGTTCTGAGCATTTCTTATATTTACATCAACTCCAGCTTCCAAAATAATCTTAACCAATTCTGCATCATTGATCATTGCTGCAGTATGCAGTGCAGTTCGACAGTGTGGGTCATCTTGTGCTGTGGGATCAGCACCAGCAGAAAGCAATACCCGTACTAACTCTCGACCCTCTTTCTCGTGCTCTTTTTTAAGAGCAGCTGCCATGCACAAAGCAGTCCCAACAGGGCTAGGTACATCAATTGCTTCAGCTATCTCCTCTTCAGATGCAACTTCAACCCATCTTTTCACCACATCCGCATTCCATGTTTTAATACATAAATGCAATGGCGTTTTATTCACAGAATTTGGTATGCCCATAGACCTGCAACCACCATTTTCCAATAAGACGATAGCACAATCAGTATATCTCTTGGCCACAGCAATATGCAGGATAGATTCGCCTTCTCCGTCTATTGCATTAGGATCAGCTCCAGCCATGAGCAATTCCCGCATGCACTCTGGTTGGCCATGATGAGCACAAACATGAGCAAGAGTAGGACCAAGACCTTCTCTAAGCCTCGAATTAACATCAGAAGATCTCCTTACAAGTGCGCGAACACACTGTGGAGAGCCAGCAGCCATAGCAAATATTATTGGAGGATTTTCATTCTTATCTAACAAGTCCACATTCTCTTGATAAGCCACAATAGCTTCAACAATTTCTGCTGAGCCTCTTCGGCATGCTAAATGTAGGGCAGTATATCCATCTGCATTCTGTGCTTCCAAGAGCGAACGAATTAAACGGCCATTTCCATCTGAGGCAGCTTCTGCAAGAAGATTCCTAACACCAGCAGCATCTCCTTCACATACAAGATGATGCAAAGCATTTGGATTGTCCTGGACCATGTCCAGAACTGAGGCTGGTGGCACATCCGTACCGTTGGGCATGCTTGCATTTGTGAAATCATTTTCAGGACTTGCAGGTGGGCTCCTTGGTATATCTAGAAGATGCCTCAGAAAAGTTTTTAGCATGTCCTGGAAAGATGGTCTTCTTGAAGGTTTGAACTGCAAACAGTCACCAATCATCTTCCAGAGCTCCCCAGGAAGTCCTACACCGACTACCCTTGAATATTGAGGCGGTGGCTTCCTCTCTTTTACAACAGACTTACAAATTTCCTCTGCACTTAGCCCAGCCCATGGAACAGCACCAGTACACATTTCCACAAGTGTACATCCAAAACTCCATGCATCTGACTCTGGTAATATTCCATTTGCACTATCCCAAAACAGATTCATTGACTTCTTCAATGGCACCCAAGCCTCAGGAGCTGTATAATTGGGGCTAAGAAGTGTAGCATCCAAGCCAACCATGTTGGAATCATCAGACACTCTACGACTAGTGAGGTTCTTAAGAATGGCCGAAAGACCATAGTCGGAAACAACTGCATGCCCATTTGTATCCAAAAGGATATTTGACGGCTTTATACTCATACAAACAATACCTGCTGCATGGAGTTCTGCTACTCCACGAGCAATATCTGCTCCATATCTGAGGATCTGCTCCAACGTTAGGCGACCGCCATTCTGCCGCATTTCTGTCTGCACAGACCCCGCGTACCGATCCATCACGAAGCAGAGGTGCCCGCCGACCCTCACAGCACCATGGAACGTGGTAACATTCCGGCACCACGTCGCGGCGCGCCTCAGCCGCTCCACCTCCTCCTGAACGCCCTCAAGCACATCCCCCGCGGTCACGGGCACCCTCTTCACCGCCACCGGATGCTTACACCTCTTGGCCCCACCTCCCCCACCACCACGAGACAGCGTGCCGGACCACACCTCCTGCCCCGCGGGGCCCGGCGGCCCGCTCCCGATGCGGCGGGCGAGCTTGAGGTCCGGATGCGAGGCGAGGTCGAACGAGGCGCAGCCCGCGGGCTGCAGCGACGGCGCCGCCGCCCCCGCCCCCGCCCCCGCGGCGGAGGATCGGCGGCTGGGCCGGCCGAAGAAGTCGTCGTCGTCGTCGTCGGAGCCGTCGGAGGAAGAGCCGCCGGAGTCGGAGTGGAGGAACGAGGGCGACGACGGGGACGACGACAGCAGCGAGAGGATGGGGAAGTTCTTCCGCAGCGCGGAGACGGAGTTGCCGACGGCGGTGGGGTGGCGGCACCGCGGGCACGCCAGCACGGCGCCCGCGGCGTTGGCGAGCATCCGGGCGAGGCACGCGCGGCAGAAGCCATGGCCGCAGTGGAGCAGCAGCGGCGCGCGCTCCTCCTCGTCGTACCGCACGTGGCACAGCGAGCAGCACGGCACCCGCATCGCGGCGCGGCGCGGCGCTGCCCTAGCTAGGGCGCGGCGCGGCGCGTCGGGGAGGAGAGAAGGGGTAGATCTGGGGGGGCGGTGGTGGTGGGGAGCGGCGGTGGGGAGGGGAGGGGGGGGTTTGGGAAGGAGGAATGGGATTTTTTGATGGGGGGGTTGGTGATGATGATGATGATGATGATGATGATGATGCGGTGGGAGCCTAGGAGGGACGACAAGCAAGGCTCTCTCCTCTTCGCTCTTGGGAGGGGAGGGGTGTGCGGTGGTGTGTTGGCCGTTTCTACTTTCTGTTCCGGTTTTGTCGAGTGTTCTCGCCTTCTCGGGGGGATTTTGGGCGATGTTGGAATAAGTTCTCCTCTTTGGTTTGGGATTTAGTACTTGAGTCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0308400.1 | 5 | 19059344 | A | G |
| Osa05LNT0308400.1 | 5 | 19057186 | A | G |
| Osa05LNT0308400.1 | 5 | 19057425 | T | C |
| Osa05LNT0308400.1 | 5 | 19060397 | T | A |
| Osa05LNT0308400.1 | 5 | 19061738 | G | C |
| Osa05LNT0308400.1 | 5 | 19062322 | C | T |
| Osa05LNT0308400.1 | 5 | 19062643 | A | C |
| Osa05LNT0308400.1 | 5 | 19062795 | G | T |
| Osa05LNT0308400.1 | 5 | 19063703 | T | C |
| Osa05LNT0308400.1 | 5 | 19064181 | C | T |
| Osa05LNT0308400.1 | 5 | 19064368 | A | T |
| Osa05LNT0308400.1 | 5 | 19066115 | A | G |
| Osa05LNT0308400.1 | 5 | 19059321 | T | C |
| Osa05LNT0308400.1 | 5 | 19066662 | C | T |
| Osa05LNT0308400.1 | 5 | 19057672 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0308400.1 | osa-miR812v | Translation | 4.5 | 18.083 | 1 | 24 |
| Osa05LNT0308400.1 | osa-miR5810 | Translation | 5.0 | 18.952 | 1 | 24 |
| Osa05LNT0308400.1 | osa-miR5820 | Translation | 4.5 | 14.702 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR5820 | Cleavage | 4.5 | 21.864 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR5820 | Cleavage | 5.0 | 17.068 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR1440b | Cleavage | 4.5 | 19.891 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR166b-5p | Cleavage | 4.5 | 9.083 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR169i-5p.2 | Translation | 3.5 | 16.134 | 1 | 22 |
| Osa05LNT0308400.1 | osa-miR414 | Cleavage | 2.0 | 8.56 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR437 | Cleavage | 3.5 | 9.575 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR1440a | Translation | 5.0 | 6.681 | 1 | 20 |
| Osa05LNT0308400.1 | osa-miR1856 | Cleavage | 5.0 | 14.719 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR1861n | Translation | 4.0 | 16.31 | 1 | 22 |
| Osa05LNT0308400.1 | osa-miR2106 | Cleavage | 4.5 | 20.054 | 1 | 21 |
| Osa05LNT0308400.1 | osa-miR2118g | Translation | 4.5 | 6.681 | 1 | 22 |
| Osa05LNT0308400.1 | osa-miR2866 | Cleavage | 4.5 | 19.078 | 1 | 20 |
| Osa05LNT0308400.1 | osa-miR1863c | Translation | 3.5 | 20.405 | 1 | 24 |
| Osa05LNT0308400.1 | osa-miR5487 | Cleavage | 4.5 | 17.727 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0308400.1 | 5 | dcs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308400.1 | 5 | dcfs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308400.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0308400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)