© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0027800.1
ACTCAAGAAAGACAAATGGACAAAACACCTTGAACCTACTCTGGCTTTTCTTGTAAAACCAGGTGGCATGCCTTTTTGTTTTTGTTTTGTGGATGGATGAAGGAATACAGCTATTAAGAGTAATGAATAAAATTGAATTGACCTGGTCACGAATCGTGATATTCCTACAAAGACATGGCCAACAAAAGGAGCAACATAGCTTGCAGACAAAACTACGATGGTACACCATGGATCAGCTGATTAAAAAAAATATCTGACAATTGGCCATTGTTAAGCAACAGGCTCCAAAACTTCAGTAACACAACCTTGGAAAAGTGTGTCATATCTCAAGCTCCTCGTGACATCAAAGAAATGAGCTACAGCTTCTTCTGGTGTTTTTACAAGAACACCATGGCCCAAGTTTAGTATATGACCTTTTGGACCAGCTGATTTGACAACCCTATGAATTTCATCGGTCAGTACTGGTAATGGAGAAAATAGAAATGCTGGGTCAACATTCCCCTGTACACTAATTTTGTTACCAAGGCGTCTCCTTCCATCTGCCATATCCACTGTCCAGTCAAGACCAATAACATCGACTCCTGTGTCCGTCATTCGCTCAAGCAAGCCTCCATTTCCATTTATATAGAGAACAAGTGGTACATTGGGGCATTCAATCTTAATCTTATTCACAATCTGCTTGATATATGGTTTTGACCACTGCTCCCACACATGAGGTGGAAGTTGTCCACCCCATGAATCAAATATTTGTATACATTGAGCCCCAGAGTTTACTTGGTAAATAATGTATTCAGATATGGCGTCTGCAAGGTGAGACAAAAGTCCCCTTAACACATTTGGTGCTGTGTGGCACATGCTCTTTATATTTGTGTAAGTGTTGGTCATCCCCCCTTCAACAACATAAGTTGCAATTGTCCATGGGGCCCCCACAAATCCTAGCAAAGCAGCTTGTCCATCAATCTAGAGGGTAGAGGAGAAAGTGAGATGTATAAGAACCAAAATAATACTGGATCAAATTGCATAGGAAAACTGAATTTAATCCAATACACTCTCACAGAATGATACTTATACATTGTTGATGTTCCCAAACAGTTATGAAATTGGAGAAAAATATACAAGTAGAGCAGACACCAGTAACCAAATTACCAATGTTTGGTCACAACCTGGTCTAACCTGGTCTGCAACTCACTGGTTGCTGGAAGGATTTAAGTGAATCACACAATATCATGAATCCCAAAAATTTAAAACAACTATTATCACAAACATTCAAATCAAGCATAGTAAAGGAGCAGACTCTGGAAATAAGCATGTGATCGATGTTTAGAAGAGACGGTGCAGCAATGATAGGTCCACAAAAATGTCAAGACTTCCTTAACTTGCTTAGTGTTTATGAAAGCCAAATTTTCCTGATATTTAATTTTAGTCAGTTGTCAGGAACGGCAGAAGAATTACTCGACTCTACTAATGAACACCGGGTAATTCCACTACCGTTTTGTTTTGCAGATGCTACACAGCGGGCTTGATAATAATTATGCACTATTGATTCCAAATCACCTTAGTCTATAAACATGACACGCTGCCAGCAAATACGCATACTATATTTCAGCACCACTTGCACCAACATTAACAAAATTGTATTTATATAAGTAGGTGAGTTTAGTGGCGACAATACAACGCCACTAGCCTAACGAAGTAGCTTTCGTGAATCAGCTAACTACGCCAGCATAGAACTAGAATGTAAAAAAACCTCTATCCCCTATTAGCATTTTCATAAAAATAATGCTGAACCAAATTTTACTTGAATCCTGTAAAGGCCAACACAGCTTGTCGTTTTACTTTCACAATAACTGCCAGCTCATATAACTAGATTTACATTGTACCAATTCATCATGAGCCCCCAAACCGAGTTTCATACAACAAATTTTAACAGAAAGGGGGTTTTCCATACCACAAAAATGGCTGCGCATTACCTCAGTGCGTAGAATCTTGAGCGACTCACCGACGAACCGGAGCTTCTCGAAGTCAATGGGGGTGAGCTCCCTCACCTGCTCCTCGGACCTCACGGGAGACTGGATCACAGGCCCCTTGGAGTCGGAGATATCGAATGGCACCCCAATGGCCGGCAGCGGCGTGAGTATGTCCGAGAACAGGATGACGCCGTCGGGCGCGAAGGCGCGCCACGGTTGCAGCGTGATCTCGACGATGAGTTCGGTCGTCTCGGACCGCTCCCGGAACGAGGGGTGGCGCTTGGCGAGCGCCTGGTACTCCGCCATGTACCGCCCGGCCTGCCGCATCATCCACGCCGGCGGCCGCGGCAGCCCGTCCTCGCCCCTCGCCGCCCGCACCAGCAGCGGCTCCTCAGTGGAGGAGGCGGTTGCGAGGGACGCGGAGATGGCGGGAAGGCCGCTGCGCCGGCGGTGGGTGGTGCAGGAGGAGGAGGAGGCCGGCGCCGCGGCGAGGAAGGCGGCGGTGGCCGTCGCGGAGATCATGGCGGTGGCGGCGACTTCGCGGCGTGGGCTTAGGTGGCTGTTTTGCTTATCTAATCCTGCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0027800.1 | 1 | 24824998 | T | A |
| Osa01LNT0027800.1 | 1 | 24825130 | A | G |
| Osa01LNT0027800.1 | 1 | 24825478 | C | T |
| Osa01LNT0027800.1 | 1 | 24826563 | C | T |
| Osa01LNT0027800.1 | 1 | 24827068 | A | G |
| Osa01LNT0027800.1 | 1 | 24827150 | A | T |
| Osa01LNT0027800.1 | 1 | 24828001 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0027800.1 | osa-miR5538 | Translation | 4.5 | 20.735 | 1 | 22 |
| Osa01LNT0027800.1 | osa-miR5807 | Translation | 4.5 | 17.203 | 1 | 24 |
| Osa01LNT0027800.1 | osa-miR166i-5p | Cleavage | 3.5 | 14.396 | 1 | 21 |
| Osa01LNT0027800.1 | osa-miR415 | Cleavage | 4.5 | 20.653 | 1 | 21 |
| Osa01LNT0027800.1 | osa-miR418 | Translation | 5.0 | 10.017 | 1 | 21 |
| Osa01LNT0027800.1 | osa-miR812f | Cleavage | 4.5 | 16.932 | 1 | 24 |
| Osa01LNT0027800.1 | osa-miR812o-3p | Translation | 4.5 | 20.93 | 1 | 24 |
| Osa01LNT0027800.1 | osa-miR5491 | Cleavage | 4.5 | 17.275 | 1 | 21 |
| Osa01LNT0027800.1 | osa-miR2275d | Cleavage | 4.0 | 12.377 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0027800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0027800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0027800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0027800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0027800.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0027800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0027800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)