© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0308900.1
CCATGATTTGGGCTCTGTTTTAGTCGAATAAAAGGATGTTACAATGTTGTTGGTGCCATCGAATGCCAATGTCCAACGCCAGAAAAAGAAACTTTTAGCTGTACAAGATCTCCCGAAGCGACTGTCAGATGTGTGGGTGGTGTCAAGGATTGTGGAAGGGGCACGGACTCATGGCTGCGCATTCCTGTGGCTTGGCCTTAGCGCCTTAGCGAAGAAGTTGCGGAGCTCTGGGATGACACGCTGGATCAGCTGGCTTGACCCAGATTTGACGCAAATCTTTTCAAACTGCTCCAAGATAAATAGGACACATGTATGTCTGAGTGACATTGCATGAAAAGCTTCAGATAGGTCATACATGTCAGAAACGTTGTCTACATTCACATCCTGCGCAATTGTATATTCACACAGACGTTTGAGGCCTTCTAATAGATACTGATCAGCAGCTCTAAGAAGATCCTGAGAGATATCGCTAGTTACTTCCACTGAACCTGTATAGATAAATCTCATCATGAGTTCAAACACATTCCATCTGATATTTGGAATTTCTATGTCTCTCGCGTCCTTTTCCCTATATCCGCCATCAAACATTGCACGAAATGCATCCGAAGAAGCAAGTAATGCAATTCTATGTGCATAAAAGCGCTTTCCTTCCACCAAGAAGGTAACATCTGAAAGTGTCGAACTGTTCACATATTGCTCACCAAGATAAACCTGTGGTGTTGGAGATGGAGGTGCAGCATCCATGGGAGAAAGTGCTGCAGCTTTGTTGGCCAATTTGTATAGTGCTACTGAACCATCTAGCTGATGCTTCAGGCTCACCGAAACCAGAAGATCAAGAAGCAACTCAAGGCCATTATTATCAATAAAAATTGTTCTTTGATCTTCAGGCGCACAGAGGTGTGCCAGGGCCAGAGCAACCCGCCTCTGCACAGATTTTTCTCCTACTCTCATCATATAAAGCAAGTGTTTTAACACTCGTCCATTTATCTTCTCCTCTAACCTCTTAAGGGTCTTAGCTACACAATCCTTTGTGGCCTGCACGATAAATTCTCCATCTTGCAACTTTTGTACACCTCCAACTTTAATGAAGTCGGACACATAGTCCTCGTTGTCAGCAACTCCGTAAAGGGCAAATGCAGCATTATGTTGCAGAGATCCATTTTTTGAGTCTAGAAGCTTTAGTAGAGGCACCAAACCACCATTATATGCAATGCCTGCTTGGTTATGTGTGTCCTGGGCAAGCCTCCCAAGGGCAAAAGCAGACATTTCTCTAAGTTGGACATCAGCTGACTGTAGCATTTCAATCAGCGGACGGACTGCACCTCTTTGCACAATATGGACCTTGCAATCAGAATCAGCCGAAGCAAACTGCCCTAGCAACAAAGCAGCCTCTCTTTGACTCTCCGTACAACAGGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0308900.1 | 5 | 19370511 | T | C |
| Osa05LNT0308900.1 | 5 | 19369000 | A | G |
| Osa05LNT0308900.1 | 5 | 19369767 | T | C |
| Osa05LNT0308900.1 | 5 | 19370256 | T | A |
| Osa05LNT0308900.1 | 5 | 19371802 | C | A |
| Osa05LNT0308900.1 | 5 | 19371994 | A | G |
| Osa05LNT0308900.1 | 5 | 19372780 | G | A |
| Osa05LNT0308900.1 | 5 | 19372824 | C | T |
| Osa05LNT0308900.1 | 5 | 19372983 | A | G |
| Osa05LNT0308900.1 | 5 | 19373230 | T | C |
| Osa05LNT0308900.1 | 5 | 19373572 | G | A |
| Osa05LNT0308900.1 | 5 | 19370674 | T | G |
| Osa05LNT0308900.1 | 5 | 19369276 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0308900.1 | osa-miR6250 | Translation | 4.5 | 8.229 | 1 | 22 |
| Osa05LNT0308900.1 | osa-miR160c-3p | Translation | 5.0 | 20.922 | 1 | 21 |
| Osa05LNT0308900.1 | osa-miR396a-3p | Cleavage | 4.5 | 22.498 | 1 | 20 |
| Osa05LNT0308900.1 | osa-miR396b-3p | Cleavage | 4.5 | 22.498 | 1 | 20 |
| Osa05LNT0308900.1 | osa-miR396c-3p | Cleavage | 4.0 | 22.498 | 1 | 21 |
| Osa05LNT0308900.1 | osa-miR2099-3p | Cleavage | 3.0 | 23.426 | 1 | 20 |
| Osa05LNT0308900.1 | osa-miR2118d | Cleavage | 5.0 | 23.027 | 1 | 22 |
| Osa05LNT0308900.1 | osa-miR5508 | Cleavage | 5.0 | 23.575 | 1 | 21 |
| Osa05LNT0308900.1 | osa-miR5518 | Translation | 5.0 | 15.896 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0308900.1 | 5 | dcs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308900.1 | 5 | dcfs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308900.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0308900.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0308900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0308900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0308900.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)