© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0310100.1
CTAGTGTGAGCCATGAGTGTTTCACTGAATCATGTAAAATGTTGAGGGCAGATAGAATGTACGAGAATATTGACGATTATTCTATCTGGTATCTACAGCTTCCTTTGAAGAAAAAGAAAGAAAGTAACCAGCCGGTACAGGTCGAACTACATGCCCAATCTCCTAATAACCAGACATGACTAAACTCTTCCGGATGCAAGAGGTGTTACTTATTGGATTTGCATCCGGAGCAGCTCTTGCGTCTTCAAAGAGAAACCACCCATTGGAGGTGTTTATATGTTCAAAAAAGTTCTGTTCTAAGCCCTGGCAACTAAGTTCAGGTGTTTCGAGTCAGCATGCATATGCGCTCCGACCAGCCAGGCATGGTAATGATTCATCAGATGAGGGAAAAAAGAATCACGGGAGAATTATCGCCGACCATTTGCCCAACTTCTAATGTGATTCCTTGACTTCATCATAGGTTGTCTATTTTGATGCTTAGGCTTTGGTATGTCGCCCAGCTCCATTACTTGTATGGTGCGCTGCCTTTTTGCATTTTCAGCTTCCTGGTAGCGCTCCTGGAGCCTCCTCTTTGCTGCTTCCAGCCTACTATTGCTTTCCAAACCATCATAGATCTTTGGCTTTGCCGACTCTAGCTTGACTCCTGCTGAAGGTTGTGCAGGAAGCCTCGATTTATCCACATGGCTCGCTGCAGGTTTTCTTTCAACAGCAACCTGCTCTCGAGCCAGTCTAGATTTCATCTCAACAAAGGGCTTCTGCTGAGGAGCTGCCCTTAATGGTCTCCCAGGTCCAGAATCAGAACTCAAGGGCTTAGATTGCTTGTGAAGCATGGCCTGCTGTTTGACTTGCAAACTTGAATTTTGAGGGGTTTGTGGGTTAGCCTGCCTCATTGATGGCTCTTGCCTTGCCAATTCCGGCCTCCTGGATTGAACTTTTTCAACAGCTCCCATGTTACGGGGAGGCTCTTGCTTTGTCAAAGCTGGATGGCTTGTAGGCCTCCTGCCATAATTTTCTCTCTTATTTCCAAGGCTCCCATCATTGTTATGTCTCAAGTTTCCATCTTCATCCATTTCATCAAAGAACTCAGAGAGTTGAATAGCAGTAGTCTGGGTTGCAAAGAACGCCCCTTCATCCAGAGGTGGAGAAGGAAGCCCTTCATCATCAGCATCATCGACAACAGATGTTTTTGAAGAGCCCGGGGAGTTGTCTGTAAGGGCAACATTAGTGGTGCTGACCCACTCATCAACCAAAATTTTCCAACCTTCAATGAGAGTGCGCACAAGGTGACGAATTTGCTGCGAGTTGTGCTTCCGCAGCCCATTAACAGCCCTCCCAATCTCAGTAGCCTTCAGCGTGGAAACGGACAATTGCATCAGCTGCAGCCTCCTCAGTGATTCGAACAAAGTAGCATCCGAATGATCTTCCTTGTGCAAGAAGAGGTCCTTGATGCGGAGAACCTCGCCGACGACCTGTGACTCCTCGTCGATCTCGTTGGTGAGTGCCTCAAGCTCCACAGCCTCGGGGTCCAGCTCTTGTTCTTCGTCCTCTTCAGCCGGCGCCGCCTCCTGCTCCTCCTCTTCCTCCTCGTCGTCATCATCGTAGTTGTGACCGTAGTTGCTCGCCGCGGCGCGGCGGAGGCGCTCGTCGTCGGAGTCAGAGTCAGAGTCGTCATCGACGTCGTCGCGGCGGCCGCCGCCGCCGCCGAGGGCGCCGTTGCTGCTGCTGTCCACCTTGCTCTGCTTCTCGGGGACGCGGCGCACGCTGCCCTTGTCCTCCTCCACGGGGGTGGCCGGGGTCGGGGTGGCGGCGCTGCCGCACCCGTGGTGGCAGGGCGGGGCGCGCGGCGCGGTGAAGAGGATCTCGCAGATGCGGTCGCGGCGGCGCAGGAGCTCCTGCGGCGCGTCGGCGGCGGCGACGAGGATGGCGTTCTCGATCACGTCGCAGATTCCGGCGGAGCCGGCCGCCCCGCGGAGGAGCTCGCGCCACCGATCCAGCCGGTCGGCCATCGCCGCCGCGGCCACCCGAGATCGGGCTCCCCCCACCTCCACCTCCACCCCCACGACTCCGATGGCTCCCCTGGCACCACCAAGAATCGATGCCCTCTCTCGATCACCTCCTCCTCCTCCTCCTCACAATCTTGAAATTTCTTTTTCCCCTTATCAGATTACGTTGCACCAAAAGAATCTAATCCAACCCGATCGCGAATCAGATGCCCCCCACCGAGGGAATCCCCCAACCGGGAAAGCGAAATTCTCCCGAGACAGCGAAAAATCAATCTAACGAACACCGCTGCCTCTCCTCAACGCCAAGAACGAATCAATCAAGAAGAGAAAACCCCAAAAAAAAAAAACAAATCAATCCTCACACCACCCAAACCCAATCTCCCCTCCCTTCCTTTGCTTCACCCCCACGTCCACGTTACTTGACGATTTCAACCCAACAAACAAAACAGCTCCTAACCAAATCTTATCTGTGCCGTCGCCGCCGCAGGAGGAGGAAGACGACGACGACGAGGGGGAGAGGGAATGCGGGGAGGGGGGTTGGATAGGGACGCGGCGGATGGCGAGGCACACGCAACGCAAAAACGAGAGCCCACGAGAACTACGCAAGCTCGACTCTACCAAACAACAACAACTACTCCTCCTCCTAATTCCCCCGCACGCACACCACCACCACCACCATGGCCTCCTAGTGGTAACAACAAATCTCGCGTCTCCCTTTCCCAACTCCTTCCGTTCGTCTCGTTCTCTCTCTCGCGCAACGGAGGTCGCAGCTTTTCTCGGTCTAGGACTTTCCGGGGGGGCCCTTTTTTTTACCGGGTTTGGGGACACAGCCACACAGGGCGAGGTCACTACGGTTTTGGAGAGGGAGGCGGCCTCGTGGCTGTTTCTCGGCTTTGACCCTGTCGAGTTGTTGGTGGGATGCAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0310100.1 | 5 | 20245716 | A | T |
| Osa05LNT0310100.1 | 5 | 20246016 | T | C |
| Osa05LNT0310100.1 | 5 | 20247224 | C | A |
| Osa05LNT0310100.1 | 5 | 20245118 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0310100.1 | osa-miR5807 | Translation | 5.0 | 17.376 | 1 | 24 |
| Osa05LNT0310100.1 | osa-miR5821 | Cleavage | 5.0 | 10.235 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR1319b | Translation | 5.0 | 15.025 | 1 | 24 |
| Osa05LNT0310100.1 | osa-miR5827 | Cleavage | 4.0 | 16.79 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR5833 | Cleavage | 5.0 | 20.923 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR166b-5p | Translation | 4.5 | 22.325 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR166d-5p | Translation | 4.0 | 22.325 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR169f.2 | Cleavage | 5.0 | 17.492 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR171f-5p | Translation | 4.5 | 17.918 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR166h-5p | Cleavage | 3.5 | 22.325 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR1425-3p | Translation | 5.0 | 15.325 | 1 | 21 |
| Osa05LNT0310100.1 | osa-miR5081 | Cleavage | 5.0 | 24.323 | 1 | 22 |
| Osa05LNT0310100.1 | osa-miR5082 | Cleavage | 3.5 | 10.64 | 1 | 24 |
| Osa05LNT0310100.1 | osa-miR5149 | Cleavage | 5.0 | 15.516 | 1 | 22 |
| Osa05LNT0310100.1 | osa-miR5504 | Cleavage | 5.0 | 16.04 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0310100.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0310100.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0310100.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0310100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310100.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)